Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30327
(595 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 158 4e-39
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 158 4e-39
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 158 4e-39
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 156 1e-38
03_01_0034 + 318432-318825,318902-319851 156 1e-38
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 156 1e-38
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 156 1e-38
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 154 4e-38
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 99 2e-21
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 98 5e-21
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 98 5e-21
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 97 7e-21
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 76 2e-14
07_01_0834 - 6779017-6779319 31 0.92
02_05_0933 + 32846658-32846729,32847038-32847133,32847243-328474... 29 2.8
06_02_0048 - 10943553-10944050 29 3.7
02_01_0302 - 2021221-2023305 29 3.7
12_01_0440 - 3478361-3479152,3479163-3479681 28 4.9
07_03_0326 - 16815736-16816257 28 4.9
03_06_0386 + 33555682-33556344,33557138-33557299 28 4.9
12_01_1080 + 11241590-11241625,11241723-11242018,11242113-112422... 28 6.5
07_03_0396 + 17672009-17672339,17672408-17673087 28 6.5
07_03_0072 - 13051145-13052362 28 6.5
04_01_0123 - 1283197-1283292,1283330-1284439,1284790-1285177,128... 28 6.5
11_06_0415 + 23306555-23306794,23306842-23307684 27 8.5
07_01_0756 + 5819367-5820038,5820847-5821005 27 8.5
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 158 bits (383), Expect = 4e-39
Identities = 71/84 (84%), Positives = 78/84 (92%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
SDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TPT+GDLNHL+S TMSG
Sbjct: 176 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSG 235
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
VT CLRFPGQLN+DLRKLAVN++P
Sbjct: 236 VTCCLRFPGQLNSDLRKLAVNLIP 259
Score = 151 bits (367), Expect = 3e-37
Identities = 76/105 (72%), Positives = 84/105 (80%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PRLHFFM GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYL+ +A+FRG+
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGK 320
Query: 436 MSMKEVDEQMLNIQNKNFLILRGMDPPTNVKDRVWRDSPLVGLKM 570
MS KEVDEQMLN+QNKN P NVK V D P +GLKM
Sbjct: 321 MSTKEVDEQMLNVQNKNSSYFVEW-IPNNVKSSVC-DIPPIGLKM 363
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 158 bits (383), Expect = 4e-39
Identities = 71/84 (84%), Positives = 78/84 (92%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
SDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TPT+GDLNHL+S TMSG
Sbjct: 176 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSG 235
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
VT CLRFPGQLN+DLRKLAVN++P
Sbjct: 236 VTCCLRFPGQLNSDLRKLAVNLIP 259
Score = 149 bits (361), Expect = 2e-36
Identities = 76/105 (72%), Positives = 83/105 (79%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PRLHFFM GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYL+ +A+FRG+
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGK 320
Query: 436 MSMKEVDEQMLNIQNKNFLILRGMDPPTNVKDRVWRDSPLVGLKM 570
MS KEVDEQMLN+QNKN P NVK V D P GLKM
Sbjct: 321 MSTKEVDEQMLNVQNKNSSYFVEW-IPNNVKSSVC-DIPPRGLKM 363
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 158 bits (383), Expect = 4e-39
Identities = 71/84 (84%), Positives = 78/84 (92%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
SDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TPT+GDLNHL+S TMSG
Sbjct: 176 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSG 235
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
VT CLRFPGQLN+DLRKLAVN++P
Sbjct: 236 VTCCLRFPGQLNSDLRKLAVNLIP 259
Score = 149 bits (361), Expect = 2e-36
Identities = 76/105 (72%), Positives = 83/105 (79%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PRLHFFM GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYL+ +A+FRG+
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGK 320
Query: 436 MSMKEVDEQMLNIQNKNFLILRGMDPPTNVKDRVWRDSPLVGLKM 570
MS KEVDEQMLN+QNKN P NVK V D P GLKM
Sbjct: 321 MSTKEVDEQMLNVQNKNSSYFVEW-IPNNVKSSVC-DIPPNGLKM 363
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 156 bits (379), Expect = 1e-38
Identities = 70/84 (83%), Positives = 78/84 (92%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
SDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+S TMSG
Sbjct: 356 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG 415
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
VT CLRFPGQLN+DLRKLAVN++P
Sbjct: 416 VTCCLRFPGQLNSDLRKLAVNLIP 439
Score = 146 bits (354), Expect = 1e-35
Identities = 74/105 (70%), Positives = 82/105 (78%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PRLHFFM GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYL+ +A+FRG+
Sbjct: 441 PRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGK 500
Query: 436 MSMKEVDEQMLNIQNKNFLILRGMDPPTNVKDRVWRDSPLVGLKM 570
MS KEVDEQM+N+QNKN P NVK V D P GL M
Sbjct: 501 MSTKEVDEQMINVQNKNSSYFVEW-IPNNVKSSVC-DIPPRGLSM 543
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 156 bits (379), Expect = 1e-38
Identities = 70/84 (83%), Positives = 78/84 (92%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
SDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+S TMSG
Sbjct: 176 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG 235
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
VT CLRFPGQLN+DLRKLAVN++P
Sbjct: 236 VTCCLRFPGQLNSDLRKLAVNLIP 259
Score = 150 bits (364), Expect = 7e-37
Identities = 76/105 (72%), Positives = 83/105 (79%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PRLHFFM GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYL+ +A+FRG+
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGK 320
Query: 436 MSMKEVDEQMLNIQNKNFLILRGMDPPTNVKDRVWRDSPLVGLKM 570
MS KEVDEQMLN+QNKN P NVK V D P GLKM
Sbjct: 321 MSTKEVDEQMLNVQNKNSSYFVEW-IPNNVKSTVC-DIPPTGLKM 363
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 156 bits (379), Expect = 1e-38
Identities = 70/84 (83%), Positives = 78/84 (92%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
SDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+S TMSG
Sbjct: 197 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG 256
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
VT CLRFPGQLN+DLRKLAVN++P
Sbjct: 257 VTCCLRFPGQLNSDLRKLAVNLIP 280
Score = 146 bits (354), Expect = 1e-35
Identities = 74/105 (70%), Positives = 82/105 (78%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PRLHFFM GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYL+ +A+FRG+
Sbjct: 282 PRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGK 341
Query: 436 MSMKEVDEQMLNIQNKNFLILRGMDPPTNVKDRVWRDSPLVGLKM 570
MS KEVDEQM+N+QNKN P NVK V D P GL M
Sbjct: 342 MSTKEVDEQMINVQNKNSSYFVEW-IPNNVKSSVC-DIPPRGLSM 384
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 156 bits (379), Expect = 1e-38
Identities = 70/84 (83%), Positives = 78/84 (92%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
SDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+S TMSG
Sbjct: 176 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG 235
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
VT CLRFPGQLN+DLRKLAVN++P
Sbjct: 236 VTCCLRFPGQLNSDLRKLAVNLIP 259
Score = 146 bits (354), Expect = 1e-35
Identities = 74/105 (70%), Positives = 82/105 (78%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PRLHFFM GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYL+ +A+FRG+
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGK 320
Query: 436 MSMKEVDEQMLNIQNKNFLILRGMDPPTNVKDRVWRDSPLVGLKM 570
MS KEVDEQM+N+QNKN P NVK V D P GL M
Sbjct: 321 MSTKEVDEQMINVQNKNSSYFVEW-IPNNVKSSVC-DIPPRGLSM 363
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 154 bits (374), Expect = 4e-38
Identities = 69/84 (82%), Positives = 77/84 (91%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
SDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+ P++GDLNHL+S TMSG
Sbjct: 192 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISATMSG 251
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
VT CLRFPGQLN+DLRKLAVN++P
Sbjct: 252 VTCCLRFPGQLNSDLRKLAVNLIP 275
Score = 150 bits (364), Expect = 7e-37
Identities = 76/105 (72%), Positives = 83/105 (79%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PRLHFFM GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYL+ +A+FRGR
Sbjct: 277 PRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGR 336
Query: 436 MSMKEVDEQMLNIQNKNFLILRGMDPPTNVKDRVWRDSPLVGLKM 570
MS KEVDEQM+N+QNKN P NVK V D P VGL M
Sbjct: 337 MSTKEVDEQMINVQNKNSSYFVEW-IPNNVKSSVC-DIPPVGLSM 379
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 99.1 bits (236), Expect = 2e-21
Identities = 43/84 (51%), Positives = 58/84 (69%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S +S
Sbjct: 259 STAVVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISS 318
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+TT LRF G +N D+ + N+VP
Sbjct: 319 LTTSLRFDGAINVDITEFQTNLVP 342
Score = 66.5 bits (155), Expect = 2e-11
Identities = 26/76 (34%), Positives = 49/76 (64%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF + +AP+ S + +VPE+T +F+ ++MA CDPRHG+Y++ ++RG
Sbjct: 344 PRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPASVMAKCDPRHGKYMACCLMYRGD 403
Query: 436 MSMKEVDEQMLNIQNK 483
+ K+V+ + +I+ +
Sbjct: 404 VVPKDVNAAVHSIKTR 419
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 97.9 bits (233), Expect = 5e-21
Identities = 44/84 (52%), Positives = 58/84 (69%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S +VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN LVS +S
Sbjct: 178 STSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISS 237
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+T LRF G LN D+ + N+VP
Sbjct: 238 LTASLRFDGALNVDVNEFQTNLVP 261
Score = 70.1 bits (164), Expect = 1e-12
Identities = 28/76 (36%), Positives = 47/76 (61%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF + +AP+ S + L+V E+T F+ +MMA CDPRHG+Y++ ++RG
Sbjct: 263 PRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGD 322
Query: 436 MSMKEVDEQMLNIQNK 483
+ K+V+ + I+ K
Sbjct: 323 VVPKDVNAAVATIKTK 338
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 97.9 bits (233), Expect = 5e-21
Identities = 44/84 (52%), Positives = 58/84 (69%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S +VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN LVS +S
Sbjct: 178 STSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISS 237
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+T LRF G LN D+ + N+VP
Sbjct: 238 LTASLRFDGALNVDVNEFQTNLVP 261
Score = 70.1 bits (164), Expect = 1e-12
Identities = 28/76 (36%), Positives = 47/76 (61%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF + +AP+ S + L+V E+T F+ +MMA CDPRHG+Y++ ++RG
Sbjct: 263 PRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGD 322
Query: 436 MSMKEVDEQMLNIQNK 483
+ K+V+ + I+ K
Sbjct: 323 VVPKDVNAAVATIKTK 338
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 97.5 bits (232), Expect = 7e-21
Identities = 43/84 (51%), Positives = 58/84 (69%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S +S
Sbjct: 178 STAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISS 237
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+TT LRF G +N D+ + N+VP
Sbjct: 238 LTTSLRFDGAINVDVTEFQTNLVP 261
Score = 73.7 bits (173), Expect = 1e-13
Identities = 29/76 (38%), Positives = 49/76 (64%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF + +AP+ S + L+VPE+T +F+ +MMA CDPRHG+Y++ ++RG
Sbjct: 263 PRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGD 322
Query: 436 MSMKEVDEQMLNIQNK 483
+ K+V+ + I+ K
Sbjct: 323 VVPKDVNAAVATIKTK 338
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 75.8 bits (178), Expect = 2e-14
Identities = 37/85 (43%), Positives = 51/85 (60%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
SD VV+PYN+ L++ +L N D +DN AL I L L+ PT+ N LVS MS
Sbjct: 179 SDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSA 238
Query: 182 VTTCLRFPGQLNADLRKLAVNMVPS 256
TT LR+PG +N DL L +++P+
Sbjct: 239 STTTLRYPGYMNNDLVGLLASLIPT 263
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Frame = +1
Query: 256 PRLHFFMPGFAPLT-SRGSRQYRALTVPELTQQMFDAKNMMAACDPRH-----GRYLSVA 417
PR HF M G+ PLT R R TV ++ +++ KN+M + R+ +Y+S+
Sbjct: 264 PRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISIL 323
Query: 418 AIFRGRMSMKEVDEQMLNIQNKNFL 492
I +G + +V E + I+ + +
Sbjct: 324 NIIQGEVDPTQVHESLQRIRERKLV 348
>07_01_0834 - 6779017-6779319
Length = 100
Score = 30.7 bits (66), Expect = 0.92
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 116 CGSRCRIEPRCRCSRFRLCFQLAGELR 36
C ++PRCRC RL GELR
Sbjct: 7 CRELAAVQPRCRCEALRLFMDGVGELR 33
>02_05_0933 +
32846658-32846729,32847038-32847133,32847243-32847411,
32847608-32847669,32848364-32849320,32850036-32850119,
32850307-32850595,32850645-32850694
Length = 592
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 252 PPASPLLHARFRSPHIPWKQTVPCLDCTRAHTTDVRRQEHDG 377
P S + R RS IP+ P ++CT A DV E +G
Sbjct: 434 PYVSRMRRGRPRSNFIPFLDPEPSVECTEAPAADVVNLEKEG 475
>06_02_0048 - 10943553-10944050
Length = 165
Score = 28.7 bits (61), Expect = 3.7
Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 7/104 (6%)
Frame = -2
Query: 435 ATAEDGSDAEVAAVARVTGGHHVLG-----VEHLLCELGYSQGTVLSASTGCEGSETWHE 271
A +DG D AA+ RV H+LG + L + G +G + +AS G G H
Sbjct: 36 ADGDDGGDQARAALLRVEELEHLLGDVARRLSRLDAKRGRLEGQIAAASRGRRGGGAHHR 95
Query: 270 EVETREGTMFT--ANFLRSAFN*PGNLRQVVTPDIVRETKWLRS 145
+ G + + R + + D+ + +WL +
Sbjct: 96 RHGSAGGISESEGEGYTRKGAGAVRKILRAAAGDVKKAREWLEA 139
>02_01_0302 - 2021221-2023305
Length = 694
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 251 PSRVSTSSCQVSLPSHPVEADSTVP*LYPSSHNRCSTP 364
PS S + + S PSHP ST P YPS + +TP
Sbjct: 468 PSYPSPNGGKPSTPSHPSPPGSTTP-SYPSPPSSSTTP 504
>12_01_0440 - 3478361-3479152,3479163-3479681
Length = 436
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 161 LSG*GHRRWVWTV*ECGSRCRIEPR 87
L G HR WVW + + C +EPR
Sbjct: 217 LEGFNHRPWVWNLLSWLTLCLVEPR 241
>07_03_0326 - 16815736-16816257
Length = 173
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 498 SWNGSPNKREGPRVARFPLGGSQ 566
+W+G + GP+VAR P G +Q
Sbjct: 32 AWSGEGEEETGPQVARVPRGSTQ 54
>03_06_0386 + 33555682-33556344,33557138-33557299
Length = 274
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -2
Query: 261 TREGTMFTANFLRSAFN*PGNLRQVVTPDIVRETKWLRSP 142
+R T NF+++ F+ +TPD R+TK+++SP
Sbjct: 209 SRGSTKTLGNFVKATFDCLMKTYGFLTPDFWRDTKFVKSP 248
>12_01_1080 + 11241590-11241625,11241723-11242018,11242113-11242269,
11242381-11242449,11242551-11243480,11243868-11243906,
11244414-11244478,11244663-11244768,11244850-11245050,
11247001-11247201,11247756-11247779,11249425-11249586,
11249676-11249915,11250267-11250479,11250618-11250968,
11251041-11251193,11251649-11251858,11252049-11252267,
11252365-11252482,11252879-11253828,11254023-11254220,
11254294-11254553,11255316-11255505,11255817-11256169,
11258278-11258386,11258466-11258615,11258748-11258844,
11259315-11259415
Length = 2065
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/59 (22%), Positives = 30/59 (50%)
Frame = +1
Query: 307 SRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGRMSMKEVDEQMLNIQNK 483
SR + + V ++ + A+ M+ A GR+ S+ ++F R+ +++ + QN+
Sbjct: 1147 SRLAQEIPVTDVCEAFKVARGMIQALQENAGRFASMVSVFCQRLGWHDLEGLVAKFQNR 1205
>07_03_0396 + 17672009-17672339,17672408-17673087
Length = 336
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 471 HPEQELPHTSWNGSPNKREGPRVA--RFPLGGSQDGRP 578
HP+Q LP + N PR+A R P+G S G P
Sbjct: 297 HPQQVLPASGCPTIANPSNAPRIAPIRRPIGKSSLGNP 334
>07_03_0072 - 13051145-13052362
Length = 405
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 108 ASALSNCPHPPTVTLTT*FPSQCLVSPLALG-SPVS 212
AS P PP+ T PS CL +P +G SPV+
Sbjct: 113 ASTAPLLPKPPSTTTAKRHPSPCLQAPQPVGLSPVT 148
>04_01_0123 -
1283197-1283292,1283330-1284439,1284790-1285177,
1285523-1287609
Length = 1226
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 459 ANA*HPEQELPHTSWNGS-PNKREGPRVARFPLGGSQDGRPTFMGK 593
A A HPEQ P NG P +RE P+ A P G+ D R G+
Sbjct: 253 ATAAHPEQP-PTGDANGEDPERRESPQRATPPPRGTGDLRDQINGR 297
>11_06_0415 + 23306555-23306794,23306842-23307684
Length = 360
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = -2
Query: 396 VARVTGGHHVLGVEHLLCELGYSQGTVLSASTGCEGSETWHEEVETREGTMFTANFLRSA 217
VA + G HVL V+ G + G + + T G +WH + T T+ + + A
Sbjct: 25 VAEMATGSHVLTVDGYSGTKGLAVGVHVKSGTFVAGGHSWHIKYFPNGATDETSEWTKGA 84
>07_01_0756 + 5819367-5820038,5820847-5821005
Length = 276
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = -2
Query: 261 TREGTMFTANFLRSAFN*PGNLRQVVTPDIVRETKWLRSP 142
+R T NF+++ F+ +TPD RET+++++P
Sbjct: 212 SRGSTKTLGNFVKATFDCLMKTYGFLTPDFWRETRFIKTP 251
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,045,611
Number of Sequences: 37544
Number of extensions: 425220
Number of successful extensions: 1353
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1345
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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