Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30327
(595 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 177 4e-45
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 177 4e-45
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 177 4e-45
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 153 1e-37
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 150 7e-37
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 118 5e-27
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 111 4e-25
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 9e-20
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 2e-19
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 3e-19
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 3e-19
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 92 4e-19
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 4e-19
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 92 4e-19
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 92 4e-19
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 92 4e-19
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 92 4e-19
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 5e-19
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 6e-19
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 91 6e-19
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 91 6e-19
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 91 8e-19
SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 4e-14
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 68 5e-12
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 68 5e-12
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 46 2e-05
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 43 2e-04
SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 31 0.93
SB_13438| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-24) 31 0.93
SB_4846| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_59726| Best HMM Match : Keratin_B2 (HMM E-Value=5.9) 29 2.8
SB_48118| Best HMM Match : DUF1314 (HMM E-Value=3.2) 29 2.8
SB_44880| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_15927| Best HMM Match : fn2 (HMM E-Value=3.9) 28 4.9
SB_13211| Best HMM Match : Extensin_2 (HMM E-Value=0.0053) 28 4.9
SB_2879| Best HMM Match : zf-C4_Topoisom (HMM E-Value=2) 28 4.9
SB_5592| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_32577| Best HMM Match : PH (HMM E-Value=7e-17) 28 6.5
SB_56402| Best HMM Match : Extensin_2 (HMM E-Value=1.1) 25 7.7
SB_24572| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_55582| Best HMM Match : GHMP_kinases (HMM E-Value=4.9e-32) 27 8.6
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 177 bits (432), Expect = 4e-45
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKL+TPTYGDLNHLVS TMSG
Sbjct: 176 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSG 235
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
VTTCLRFPGQLNADLRKLAVNMVP
Sbjct: 236 VTTCLRFPGQLNADLRKLAVNMVP 259
Score = 166 bits (403), Expect = 1e-41
Identities = 84/105 (80%), Positives = 88/105 (83%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PRLHFFMPGFAPLTSRGS+QYRALTVPELTQQMFDAKNMMAACDPRHGRYL+VAA+FRGR
Sbjct: 261 PRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGR 320
Query: 436 MSMKEVDEQMLNIQNKNFLILRGMDPPTNVKDRVWRDSPLVGLKM 570
MSMKEVDEQMLN+QNKN P NVK V D P GLKM
Sbjct: 321 MSMKEVDEQMLNVQNKNSSYFVEW-IPNNVKTAVC-DIPPRGLKM 363
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 177 bits (432), Expect = 4e-45
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKL+TPTYGDLNHLVS TMSG
Sbjct: 121 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSG 180
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
VTTCLRFPGQLNADLRKLAVNMVP
Sbjct: 181 VTTCLRFPGQLNADLRKLAVNMVP 204
Score = 158 bits (383), Expect = 4e-39
Identities = 81/105 (77%), Positives = 86/105 (81%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PRL FFMPGFAPLTSRGS+QYRALTVPELTQQMFDAKNMMAACDP HGRYL+VAA+FRGR
Sbjct: 206 PRLPFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPLHGRYLTVAAMFRGR 265
Query: 436 MSMKEVDEQMLNIQNKNFLILRGMDPPTNVKDRVWRDSPLVGLKM 570
MSMKE+DEQMLN+QNKN P NVK V D P GLKM
Sbjct: 266 MSMKELDEQMLNVQNKNSSYFVEW-IPNNVKTAVC-DIPPRGLKM 308
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 177 bits (432), Expect = 4e-45
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKL+TPTYGDLNHLVS TMSG
Sbjct: 176 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSG 235
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
VTTCLRFPGQLNADLRKLAVNMVP
Sbjct: 236 VTTCLRFPGQLNADLRKLAVNMVP 259
Score = 166 bits (403), Expect = 1e-41
Identities = 84/105 (80%), Positives = 88/105 (83%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PRLHFFMPGFAPLTSRGS+QYRALTVPELTQQMFDAKNMMAACDPRHGRYL+VAA+FRGR
Sbjct: 261 PRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGR 320
Query: 436 MSMKEVDEQMLNIQNKNFLILRGMDPPTNVKDRVWRDSPLVGLKM 570
MSMKEVDEQMLN+QNKN P NVK V D P GLKM
Sbjct: 321 MSMKEVDEQMLNVQNKNSSYFVEW-IPNNVKTAVC-DIPPRGLKM 363
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 153 bits (370), Expect = 1e-37
Identities = 67/84 (79%), Positives = 77/84 (91%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S+ VVEPYNA LSVHQL+E TDE +CIDNEALYDIC++TLKL+T TY DLNH++S TMSG
Sbjct: 81 SEIVVEPYNAALSVHQLLETTDEVFCIDNEALYDICYKTLKLNTTTYSDLNHIISNTMSG 140
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+TTCLRFPGQLNADLRKLAVNM+P
Sbjct: 141 LTTCLRFPGQLNADLRKLAVNMIP 164
Score = 108 bits (259), Expect = 4e-24
Identities = 48/76 (63%), Positives = 62/76 (81%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PRLHFFMPGFAPLTSR YRALTV +LTQ +FD KN++ AC+P+ G+YL+ AA++RG
Sbjct: 166 PRLHFFMPGFAPLTSRECVSYRALTVADLTQAIFDNKNLLIACNPKRGKYLTYAAMYRGL 225
Query: 436 MSMKEVDEQMLNIQNK 483
MSMKEV++QM Q++
Sbjct: 226 MSMKEVEDQMAFAQDR 241
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 150 bits (364), Expect = 7e-37
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKL+TPTYGDLNHLVS TMSG
Sbjct: 389 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSG 448
Query: 182 VTTCLRFPGQ 211
VTTCLRFPGQ
Sbjct: 449 VTTCLRFPGQ 458
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 118 bits (283), Expect = 5e-27
Identities = 51/65 (78%), Positives = 60/65 (92%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PRLHFFMPGFAPL SR ++QY+ ++V ELTQQMFDA+NMM ACDPRHGRYL+VAAIFRG+
Sbjct: 5 PRLHFFMPGFAPLASRANQQYQNVSVEELTQQMFDARNMMTACDPRHGRYLTVAAIFRGK 64
Query: 436 MSMKE 450
MSM+E
Sbjct: 65 MSMRE 69
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 449 RSTSKCLTSRTRTSSYFVEWIPQQT*RTACGEIPPWWVSRWAANFHG 589
R + L ++ + S +FVEWIP T C +I P + + AA F G
Sbjct: 152 RVDEQMLNTQNKNSPFFVEWIPNNVKTTVC-DIAPKGL-KMAATFVG 196
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 111 bits (267), Expect = 4e-25
Identities = 53/94 (56%), Positives = 65/94 (69%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S+TV EPYNATLS HQLV+ D CIDNEALY+IC+ LK TPTY +LN L++ TMSG
Sbjct: 84 SETVTEPYNATLSFHQLVDVADAAICIDNEALYNICYNVLKRETPTYSELNSLIATTMSG 143
Query: 182 VTTCLRFPGQLNADLRKLAVNMVPSRVSTSSCQV 283
VTT LRFPGQ + V +P+ + T+ C V
Sbjct: 144 VTTSLRFPGQDSHS--SSFVEWIPNNMKTAVCDV 175
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 452 STSKCLTSRTRTSSYFVEWIPQQT*RTACGEIPP 553
+TS + SS FVEWIP +TA ++PP
Sbjct: 145 TTSLRFPGQDSHSSSFVEWIPNNM-KTAVCDVPP 177
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 93.9 bits (223), Expect = 9e-20
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+S +S
Sbjct: 549 SSAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQLVSS 608
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+T LRF G LN DL + N+VP
Sbjct: 609 ITASLRFDGALNVDLTEFQTNLVP 632
Score = 91.9 bits (218), Expect = 4e-19
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S
Sbjct: 982 STAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSS 1041
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+T LRF G LN DL + N+VP
Sbjct: 1042 ITASLRFDGALNVDLTEFQTNLVP 1065
Score = 69.3 bits (162), Expect = 2e-12
Identities = 28/76 (36%), Positives = 45/76 (59%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF M +AP+ S + LTV ++T F+ N M CDPRHG+Y++ ++RG
Sbjct: 634 PRIHFPMASYAPVVSAEKAYHEQLTVADITNSCFEPANQMVKCDPRHGKYMACCLLYRGD 693
Query: 436 MSMKEVDEQMLNIQNK 483
+ K+V+ + I+ K
Sbjct: 694 VVPKDVNSAIATIKTK 709
Score = 34.7 bits (76), Expect = 0.057
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMM 375
PR+HF + +AP+ S + LTV E+T F+ N M
Sbjct: 1067 PRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQM 1106
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 93.1 bits (221), Expect = 2e-19
Identities = 41/84 (48%), Positives = 55/84 (65%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S VVEPYN+ LS H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S
Sbjct: 143 STAVVEPYNSILSTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSS 202
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+T LRF G LN DL + N+VP
Sbjct: 203 ITASLRFDGALNVDLTEFQTNLVP 226
Score = 67.7 bits (158), Expect = 7e-12
Identities = 28/76 (36%), Positives = 45/76 (59%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF M +AP+ S + +TV +LT F+ N M CDPRHG+Y++ ++RG
Sbjct: 228 PRIHFPMATYAPIISAEKAYHEMMTVSDLTNACFEPANQMVKCDPRHGKYMACCLLYRGD 287
Query: 436 MSMKEVDEQMLNIQNK 483
+ K+V+ + I+ K
Sbjct: 288 VVPKDVNAAIATIKTK 303
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 92.3 bits (219), Expect = 3e-19
Identities = 41/84 (48%), Positives = 55/84 (65%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S
Sbjct: 309 STAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSS 368
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
VT LRF G LN DL + N+VP
Sbjct: 369 VTASLRFDGALNVDLTEFQTNLVP 392
Score = 60.1 bits (139), Expect = 1e-09
Identities = 24/76 (31%), Positives = 44/76 (57%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF + +AP+ + ++V E+T F+ N M CDPR+G+Y++ ++RG
Sbjct: 394 PRIHFPLATYAPVIGADKAYHENMSVAEITSACFEPSNQMVKCDPRYGKYMACCLLYRGD 453
Query: 436 MSMKEVDEQMLNIQNK 483
+ K+V+ + I+ K
Sbjct: 454 VVPKDVNSAIAAIKMK 469
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 92.3 bits (219), Expect = 3e-19
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S
Sbjct: 178 STAVVEPYNSVLTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSS 237
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+T LRF G LN DL + N+VP
Sbjct: 238 ITASLRFDGALNVDLTEFQTNLVP 261
Score = 67.3 bits (157), Expect = 9e-12
Identities = 28/76 (36%), Positives = 45/76 (59%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF + +AP+ S + LTV E+T F+ N M CDPRHG+Y++ ++RG
Sbjct: 263 PRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGD 322
Query: 436 MSMKEVDEQMLNIQNK 483
+ K+V+ + I+ K
Sbjct: 323 VVPKDVNAAIATIKTK 338
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 91.9 bits (218), Expect = 4e-19
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S
Sbjct: 177 STAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSS 236
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+T LRF G LN DL + N+VP
Sbjct: 237 ITASLRFDGALNVDLTEFQTNLVP 260
Score = 66.1 bits (154), Expect = 2e-11
Identities = 27/76 (35%), Positives = 45/76 (59%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF + +AP+ S + LTV ++T F+ N M CDPRHG+Y++ ++RG
Sbjct: 262 PRIHFPLATYAPVISAEKAYHEQLTVADITNACFEPANQMVKCDPRHGKYMACCLLYRGD 321
Query: 436 MSMKEVDEQMLNIQNK 483
+ K+V+ + I+ K
Sbjct: 322 VVPKDVNAAIATIKTK 337
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 91.9 bits (218), Expect = 4e-19
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S
Sbjct: 163 STAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSS 222
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+T LRF G LN DL + N+VP
Sbjct: 223 ITASLRFDGALNVDLTEFQTNLVP 246
Score = 77.0 bits (181), Expect = 1e-14
Identities = 36/84 (42%), Positives = 52/84 (61%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +
Sbjct: 596 STAVVEPYNSVLTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIDCVLHH 655
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+ LR+ LN DL + N+VP
Sbjct: 656 CLSTLRW--ILNVDLMEFQTNLVP 677
Score = 68.9 bits (161), Expect = 3e-12
Identities = 29/76 (38%), Positives = 45/76 (59%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF M +AP+ S + +TV +LT F+ N M CDPRHG+Y++ +FRG
Sbjct: 679 PRIHFPMATYAPIISAEKAYHEMMTVSDLTNACFEPANQMVKCDPRHGKYMACCLLFRGD 738
Query: 436 MSMKEVDEQMLNIQNK 483
+ K+V+ + I+ K
Sbjct: 739 VVPKDVNAAIATIKTK 754
Score = 68.5 bits (160), Expect = 4e-12
Identities = 29/76 (38%), Positives = 45/76 (59%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF + +AP+ S + LTV E+T F+ N M CDPRHG+Y++ +FRG
Sbjct: 248 PRIHFPLATYAPVISAEKAYHEQLTVAEITTSCFEPANQMVKCDPRHGKYMACCLLFRGD 307
Query: 436 MSMKEVDEQMLNIQNK 483
+ K+V+ + I+ K
Sbjct: 308 VVPKDVNAAIATIKTK 323
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 91.9 bits (218), Expect = 4e-19
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S
Sbjct: 178 STAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSS 237
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+T LRF G LN DL + N+VP
Sbjct: 238 ITASLRFDGALNVDLTEFQTNLVP 261
Score = 91.9 bits (218), Expect = 4e-19
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S
Sbjct: 611 STAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSS 670
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+T LRF G LN DL + N+VP
Sbjct: 671 ITASLRFDGALNVDLTEFQTNLVP 694
Score = 67.3 bits (157), Expect = 9e-12
Identities = 28/76 (36%), Positives = 45/76 (59%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF + +AP+ S + LTV E+T F+ N M CDPRHG+Y++ ++RG
Sbjct: 696 PRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGD 755
Query: 436 MSMKEVDEQMLNIQNK 483
+ K+V+ + I+ K
Sbjct: 756 VVPKDVNAAIATIKTK 771
Score = 65.7 bits (153), Expect = 3e-11
Identities = 27/76 (35%), Positives = 45/76 (59%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF + +AP+ S + L+V E+T F+ N M CDPRHG+Y++ ++RG
Sbjct: 263 PRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 322
Query: 436 MSMKEVDEQMLNIQNK 483
+ K+V+ + I+ K
Sbjct: 323 VVPKDVNAAIATIKTK 338
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 91.9 bits (218), Expect = 4e-19
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S
Sbjct: 763 STAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSS 822
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+T LRF G LN DL + N+VP
Sbjct: 823 ITASLRFDGALNVDLTEFQTNLVP 846
Score = 91.1 bits (216), Expect = 6e-19
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S
Sbjct: 242 STAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMGQIVSS 301
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+T LRF G LN DL + N+VP
Sbjct: 302 ITASLRFDGALNVDLTEFQTNLVP 325
Score = 65.7 bits (153), Expect = 3e-11
Identities = 27/76 (35%), Positives = 45/76 (59%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF + +AP+ S + L+V E+T F+ N M CDPRHG+Y++ ++RG
Sbjct: 327 PRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 386
Query: 436 MSMKEVDEQMLNIQNK 483
+ K+V+ + I+ K
Sbjct: 387 VVPKDVNAAIATIKTK 402
Score = 65.7 bits (153), Expect = 3e-11
Identities = 27/76 (35%), Positives = 45/76 (59%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF + +AP+ S + L+V E+T F+ N M CDPRHG+Y++ ++RG
Sbjct: 848 PRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGD 907
Query: 436 MSMKEVDEQMLNIQNK 483
+ K+V+ + I+ K
Sbjct: 908 VVPKDVNAAIATIKTK 923
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 91.9 bits (218), Expect = 4e-19
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S
Sbjct: 103 STAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSS 162
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+T LRF G LN DL + N+VP
Sbjct: 163 ITASLRFDGALNVDLTEFQTNLVP 186
Score = 66.9 bits (156), Expect = 1e-11
Identities = 28/76 (36%), Positives = 45/76 (59%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF + +AP+ S + LTV E+T F+ N M CDPRHG+Y++ ++RG
Sbjct: 188 PRIHFPLATYAPVISAEKAYHEQLTVAEITNSCFEPANQMVKCDPRHGKYMACCLLYRGD 247
Query: 436 MSMKEVDEQMLNIQNK 483
+ K+V+ + I+ K
Sbjct: 248 VVPKDVNAAIATIRPK 263
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 91.9 bits (218), Expect = 4e-19
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S
Sbjct: 178 STAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIDRPTYTNLNRLIGQIVSS 237
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+T LRF G LN DL + N+VP
Sbjct: 238 ITASLRFDGALNVDLTEFQTNLVP 261
Score = 66.5 bits (155), Expect = 2e-11
Identities = 27/76 (35%), Positives = 45/76 (59%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF + +AP+ S + L+V E+T F+ N M CDPRHG+Y++ ++RG
Sbjct: 263 PRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGD 322
Query: 436 MSMKEVDEQMLNIQNK 483
+ K+V+ + I+ K
Sbjct: 323 VVPKDVNSSIATIKTK 338
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 91.5 bits (217), Expect = 5e-19
Identities = 39/84 (46%), Positives = 56/84 (66%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S VVEPYN+ L+ H +E++D T+ +DNEA+YD+C R L + P Y +LN L+ +S
Sbjct: 1089 STAVVEPYNSVLTTHTTLEHSDCTFMVDNEAIYDLCRRNLDVERPGYANLNRLIGQIVSS 1148
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+T+ LRF G LN DL + N+VP
Sbjct: 1149 ITSSLRFDGALNVDLTEFQTNLVP 1172
Score = 64.5 bits (150), Expect = 6e-11
Identities = 27/90 (30%), Positives = 50/90 (55%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF + +AP+ S + LTV ++T FD N M CDPRHG+Y++ ++RG
Sbjct: 1174 PRIHFPLVTYAPVISPEKAYHEQLTVAQITNMCFDPNNQMVKCDPRHGKYMACCMLYRGD 1233
Query: 436 MSMKEVDEQMLNIQNKNFLILRGMDPPTNV 525
+ + ++D ++ ++ + +R + V
Sbjct: 1234 VFIYQLDISNMDSKSASLSHMRSQNASREV 1263
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 91.1 bits (216), Expect = 6e-19
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S
Sbjct: 115 STAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMGQIVSS 174
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+T LRF G LN DL + N+VP
Sbjct: 175 ITASLRFDGALNVDLTEFQTNLVP 198
Score = 65.7 bits (153), Expect = 3e-11
Identities = 27/76 (35%), Positives = 45/76 (59%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF + +AP+ S + L+V E+T F+ N M CDPRHG+Y++ ++RG
Sbjct: 200 PRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 259
Query: 436 MSMKEVDEQMLNIQNK 483
+ K+V+ + I+ K
Sbjct: 260 VVPKDVNAAIATIKTK 275
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 91.1 bits (216), Expect = 6e-19
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S
Sbjct: 53 STAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMGQIVSS 112
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+T LRF G LN DL + N+VP
Sbjct: 113 ITASLRFDGALNVDLTEFQTNLVP 136
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 91.1 bits (216), Expect = 6e-19
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S
Sbjct: 103 STAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMGQIVSS 162
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+T LRF G LN DL + N+VP
Sbjct: 163 ITASLRFDGALNVDLTEFQTNLVP 186
Score = 65.7 bits (153), Expect = 3e-11
Identities = 27/76 (35%), Positives = 45/76 (59%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF + +AP+ S + L+V E+T F+ N M CDPRHG+Y++ ++RG
Sbjct: 188 PRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 247
Query: 436 MSMKEVDEQMLNIQNK 483
+ K+V+ + I+ K
Sbjct: 248 VVPKDVNAAIATIKTK 263
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 90.6 bits (215), Expect = 8e-19
Identities = 39/84 (46%), Positives = 55/84 (65%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
+ VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN L+ +S
Sbjct: 168 ASAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSS 227
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
VT LRF G LN DL + N+VP
Sbjct: 228 VTASLRFDGSLNVDLNEFQTNLVP 251
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELT 345
PR+HF + +AP+ S + LTV E+T
Sbjct: 253 PRIHFPLATYAPVISAEKAYHEQLTVAEIT 282
>SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 74.9 bits (176), Expect = 4e-14
Identities = 35/85 (41%), Positives = 53/85 (62%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
SD VV+PYN+ L++ +L +N D +DN AL I L++ PT+ +N LVS M+
Sbjct: 215 SDVVVQPYNSILTLKRLTQNADCVVVLDNTALNRIAADRLRIPNPTFSQVNQLVSTIMAT 274
Query: 182 VTTCLRFPGQLNADLRKLAVNMVPS 256
TT LR+PG +N DL L +++P+
Sbjct: 275 STTTLRYPGYMNNDLIGLIASLIPT 299
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTS 300
PRLHF M G+ PLT+
Sbjct: 300 PRLHFLMTGYTPLTT 314
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 68.1 bits (159), Expect = 5e-12
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = +2
Query: 80 IDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVP 253
+DNEA+YDIC R L + PTY +LN L+ +S +T LRF G LN DL + N+VP
Sbjct: 2 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 59
Score = 66.1 bits (154), Expect = 2e-11
Identities = 27/76 (35%), Positives = 45/76 (59%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF + +AP+ S + LTV ++T F+ N M CDPRHG+Y++ ++RG
Sbjct: 61 PRIHFPLATYAPVISAEKAYHEQLTVADITNACFEPANQMVKCDPRHGKYMACCLLYRGD 120
Query: 436 MSMKEVDEQMLNIQNK 483
+ K+V+ + I+ K
Sbjct: 121 VVPKDVNAAIATIKTK 136
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 68.1 bits (159), Expect = 5e-12
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = +2
Query: 80 IDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVP 253
+DNEA+YDIC R L + PTY +LN L+ +S +T LRF G LN DL + N+VP
Sbjct: 2 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 59
Score = 65.7 bits (153), Expect = 3e-11
Identities = 27/76 (35%), Positives = 45/76 (59%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF + +AP+ S + L+V E+T F+ N M CDPRHG+Y++ ++RG
Sbjct: 61 PRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 120
Query: 436 MSMKEVDEQMLNIQNK 483
+ K+V+ + I+ K
Sbjct: 121 VVPKDVNAAIATIKTK 136
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/94 (27%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Frame = +2
Query: 5 DTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGV 184
+ +V+ YNATL++ QL +++D ++N+ L IC + L L ++ D+N +VS + +
Sbjct: 184 EVIVQNYNATLTLAQLYKSSDAIIIVENDKLQKICSKLLNLKHISFRDINKVVSHKLGSM 243
Query: 185 TTCLRF--PGQLNADLRK-LAVNMVPSRVSTSSC 277
++ GQ +L K L+V+ + + + C
Sbjct: 244 LQPMKLFRAGQSETELGKTLSVSSLLADIVEQLC 277
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +2
Query: 5 DTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 109
D + PYN+ L++HQL E+ D I+N+AL DIC
Sbjct: 190 DVITSPYNSVLAMHQLTEHADCVLPIENQALVDIC 224
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
P+LH+ + PL + + + ++ F + + DP+H YL+ A I RG
Sbjct: 310 PKLHYLVSSQTPLYALTDVKLPPRRLDQMFTDAFSKDHQLIKADPKHNLYLACALILRGN 369
Query: 436 MSMKEV 453
+ + ++
Sbjct: 370 VEVSDI 375
Score = 34.3 bits (75), Expect = 0.075
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +2
Query: 149 LNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVP 253
+N++V+ + +T+ RF G LN DL ++ +N+VP
Sbjct: 274 MNNIVANLILNMTSSARFEGSLNVDLNEITMNLVP 308
>SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 32.7 bits (71), Expect = 0.23
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 5 DTVVEPYNATLSVHQLVENTDETYCIDNE 91
D + PYN+ L++HQL E+ D I+N+
Sbjct: 42 DVITSPYNSVLAMHQLTEHADCVLPIENQ 70
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 449 RSTSKCLTSRTRTSSYFVEWIPQQT*RTACGEIPPWWVSRWAANFHG 589
R + L ++ + S +FVEWIP T C +I P + + AA F G
Sbjct: 90 RVDEQMLNTQNKNSPFFVEWIPNNVKTTVC-DIAPKGL-KMAATFVG 134
>SB_13438| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-24)
Length = 672
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -2
Query: 441 GHATAEDGSDAEVAAVARVTGGHHVLGVEHLLCELGYSQGTVLSASTG 298
GHAT G ++A A TGGH + H G++ TV ++ G
Sbjct: 449 GHATNTAGHATDIAGHATNTGGHETVIARHAADIAGHAINTVGQSNKG 496
>SB_4846| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 684
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3
Query: 63 QTKPTASTTRLYTTSASALSNCPHPPTVTLTT 158
QT PT+S T T S +CPH P TL T
Sbjct: 373 QTLPTSSRTN--TAHISPYKHCPHQPVQTLPT 402
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3
Query: 63 QTKPTASTTRLYTTSASALSNCPHPPTVTLTT 158
QT PT+S R T S +CPH P TL T
Sbjct: 466 QTPPTSS--RANTAHISQCKHCPHQPVQTLPT 495
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3
Query: 63 QTKPTASTTRLYTTSASALSNCPHPPTVTLTT 158
QT PT+S T T S +CPH P TL T
Sbjct: 541 QTLPTSSRTN--TAHISPYKHCPHHPVQTLPT 570
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 63 QTKPTASTTRLYTTSASALSNCPHPPTVTLTT 158
QT PT++ T T S +CPH P TL T
Sbjct: 491 QTLPTSARTN--TAHISPCKHCPHQPVQTLPT 520
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 63 QTKPTASTTRLYTTSASALSNCPHPPTVTLTT 158
QT PT++ T T S +CPH P TL T
Sbjct: 323 QTLPTSARTN--TAHISPYKHCPHHPVQTLPT 352
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 63 QTKPTASTTRLYTTSASALSNCPHPPTVTLTT 158
QT PT++ T T S +CPH P TL T
Sbjct: 348 QTLPTSARTN--TAHISPYKHCPHHPVQTLPT 377
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 63 QTKPTASTTRLYTTSASALSNCPHPPTVTLTT 158
QT PT++ T T S +CPH P TL T
Sbjct: 566 QTLPTSARTN--TAHISPYKHCPHHPVQTLPT 595
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 63 QTKPTASTTRLYTTSASALSNCPHPPTVTLTT 158
QT PT++ R T S +CPH P TL T
Sbjct: 516 QTLPTSA--RANTAHISPYKHCPHQPVQTLPT 545
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 63 QTKPTASTTRLYTTSASALSNCPHPPTVTLTT 158
QT PT++ R T S +CPH P TL T
Sbjct: 591 QTLPTSA--RANTAHISPCKHCPHQPVQTLPT 620
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 63 QTKPTASTTRLYTTSASALSNCPHPPTVTLTT 158
QT PT++ R T S +CPH P TL T
Sbjct: 616 QTLPTSA--RANTAHISQCKHCPHQPVQTLPT 645
>SB_59726| Best HMM Match : Keratin_B2 (HMM E-Value=5.9)
Length = 319
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3
Query: 63 QTKPTASTTRLYTTSASALSNCPHPPTVTLTT 158
QT PT+S R T S +CPH P TL T
Sbjct: 129 QTPPTSS--RANTAHISQCKHCPHQPVQTLPT 158
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 63 QTKPTASTTRLYTTSASALSNCPHPPTVTLTT 158
QT PT++ T T S +CPH P TL T
Sbjct: 154 QTLPTSARTN--TAHISPYKHCPHQPVQTLPT 183
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 63 QTKPTASTTRLYTTSASALSNCPHPPTVTLTT 158
QT PT++ T T S +CPH P TL T
Sbjct: 179 QTLPTSARTN--TAHISPYKHCPHQPVQTLPT 208
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 63 QTKPTASTTRLYTTSASALSNCPHPPTVTLTT 158
QT PT++ T T S +CPH P TL T
Sbjct: 254 QTLPTSARTN--TAHISPCKHCPHQPVQTLPT 283
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 63 QTKPTASTTRLYTTSASALSNCPHPPTVTLTT 158
QT PT++ T T S +CPH P TL T
Sbjct: 279 QTLPTSARTN--TAHISPCKHCPHQPVQTLPT 308
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 63 QTKPTASTTRLYTTSASALSNCPHPPTVTLTT 158
QT PT++ T T S +CPH P TL T
Sbjct: 229 QTLPTSARTN--TAHISPYKHCPHHPVQTLPT 258
>SB_48118| Best HMM Match : DUF1314 (HMM E-Value=3.2)
Length = 341
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +1
Query: 277 PGFAPLTSRGSRQYRALTVPELTQQMFDAK---NMMAACDPRHGRYLSVAA 420
PG+ L++ GS Q T P +T +M+ K N +AA P R+ ++AA
Sbjct: 118 PGYLSLSAFGSPQVSRSTTPGITYEMYGVKERGNSLAA-RPATSRHATLAA 167
>SB_44880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 758
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = -3
Query: 545 SRHTRSFTFVGGSIPRSMRKFLFWMLSICSSTSFMDMRPRKMAATLR*RPWRGSQAAIMF 366
+R R+F ++G S+PR R+ LS+ + +F R + + R R +R + A++
Sbjct: 183 ARKARAFRYLGASVPRDGRE-----LSVIKARAF---REKSASIPRRPRAFRETGASLAK 234
Query: 365 LASNI 351
LA N+
Sbjct: 235 LAENL 239
>SB_15927| Best HMM Match : fn2 (HMM E-Value=3.9)
Length = 343
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 63 QTKPTASTTRLYTTSASALSNCPHPPTVTLTT 158
QT PT++ T T S +CPH P TL T
Sbjct: 53 QTLPTSARTN--TAHISPCKHCPHQPVQTLPT 82
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 63 QTKPTASTTRLYTTSASALSNCPHPPTVTLTT 158
QT PT++ T T S +CPH P TL T
Sbjct: 128 QTLPTSARTN--TAHISPYKHCPHQPVQTLPT 157
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 63 QTKPTASTTRLYTTSASALSNCPHPPTVTLTT 158
QT PT++ T T S +CPH P TL T
Sbjct: 153 QTLPTSARTN--TAHISPYKHCPHQPVQTLPT 182
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 63 QTKPTASTTRLYTTSASALSNCPHPPTVTLTT 158
QT PT++ T T S +CPH P TL T
Sbjct: 178 QTLPTSARTN--TAHISPYKHCPHQPVQTLPT 207
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 63 QTKPTASTTRLYTTSASALSNCPHPPTVTLTT 158
QT PT++ R T S +CPH P TL T
Sbjct: 78 QTLPTSA--RANTAHISPYKHCPHQPVQTLPT 107
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 63 QTKPTASTTRLYTTSASALSNCPHPPTVTLTT 158
QT PT++ R T S +CPH P TL T
Sbjct: 103 QTLPTSA--RANTAHISPYKHCPHQPVQTLPT 132
>SB_13211| Best HMM Match : Extensin_2 (HMM E-Value=0.0053)
Length = 545
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +3
Query: 186 PLALGSPVS*TLISENWP*TWFPPASPLLHARFRSPHIPWKQTVPCLDCTRAHT 347
P+ +G V +S P F +PLLH R PH+P+ P L A T
Sbjct: 91 PVHIGPHVPAVHLSPRVPSLHFGTNAPLLHVR---PHVPFVHMTPPLHAVHALT 141
>SB_2879| Best HMM Match : zf-C4_Topoisom (HMM E-Value=2)
Length = 610
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 390 RVTGGHHVLGVEHLLC 343
+ TG HHVL V+H+LC
Sbjct: 521 KYTGPHHVLTVDHVLC 536
>SB_5592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1092
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -2
Query: 390 RVTGGHHVLGVEHLLCELGYSQ 325
+ TG HHVL V+HLL + GY++
Sbjct: 1019 KYTGPHHVLTVDHLLLQ-GYTK 1039
>SB_32577| Best HMM Match : PH (HMM E-Value=7e-17)
Length = 1248
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 452 STSKCLTSRTRTSSYFVEWIPQQT*RTACGEIPPWWV 562
ST++ T TS+ EW+ Q + T GE P W+
Sbjct: 1100 STTRSFTLSASTSAERDEWLEQDSEDTKLGEKAPVWI 1136
>SB_56402| Best HMM Match : Extensin_2 (HMM E-Value=1.1)
Length = 352
Score = 25.4 bits (53), Expect(2) = 7.7
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 86 NEALYDICFRTLKLSTPTYG 145
N L+++ + TL + TPTYG
Sbjct: 182 NPNLWNLTYGTLSIETPTYG 201
Score = 20.6 bits (41), Expect(2) = 7.7
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 131 TPTYGDLNH 157
TPTYG L H
Sbjct: 231 TPTYGTLTH 239
>SB_24572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1032
Score = 27.5 bits (58), Expect = 8.6
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +3
Query: 294 HIPWKQTVPCLDCTRAH 344
H W +PCL C R H
Sbjct: 1014 HYKWNVRIPCLSCNRRH 1030
>SB_55582| Best HMM Match : GHMP_kinases (HMM E-Value=4.9e-32)
Length = 307
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 319 RALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGRMSMKEVDEQMLNIQNK 483
R++ +PE + AKN A G S+ A+ +G + K+V M NI K
Sbjct: 232 RSILIPEFDNVIAAAKNTGALGGGISGSGPSIFALSKGEETAKQVGLAMTNIYQK 286
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,095,119
Number of Sequences: 59808
Number of extensions: 458662
Number of successful extensions: 2370
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 2074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2364
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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