Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30327
(595 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 157 4e-39
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 156 9e-39
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 156 9e-39
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 156 9e-39
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 156 9e-39
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 156 1e-38
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 156 1e-38
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 153 6e-38
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 153 6e-38
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 101 5e-22
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 98 3e-21
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 98 3e-21
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 98 3e-21
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 98 3e-21
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 98 4e-21
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 98 4e-21
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 76 2e-14
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 75 3e-14
At5g20860.1 68418.m02477 pectinesterase family protein contains ... 32 0.25
At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR... 31 0.58
At5g46510.1 68418.m05727 disease resistance protein (TIR-NBS-LRR... 31 0.58
At4g32700.1 68417.m04655 DNA-directed DNA polymerase family prot... 27 7.1
At4g00220.1 68417.m00023 LOB domain protein 30 / lateral organ b... 27 7.1
At2g09388.1 68415.m01011 hypothetical protein 27 7.1
At1g76350.1 68414.m08871 RWP-RK domain-containing protein simila... 27 7.1
At5g41720.1 68418.m05073 F-box family protein contains Pfam PF00... 27 9.4
At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR... 27 9.4
At2g45490.1 68415.m05658 protein kinase, putative contains prote... 27 9.4
At2g40290.2 68415.m04961 eukaryotic translation initiation facto... 27 9.4
At2g40290.1 68415.m04960 eukaryotic translation initiation facto... 27 9.4
At2g37590.1 68415.m04612 Dof-type zinc finger domain-containing ... 27 9.4
At1g05360.1 68414.m00543 expressed protein Similar to Arabidopsi... 27 9.4
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 157 bits (382), Expect = 4e-39
Identities = 71/84 (84%), Positives = 78/84 (92%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
SDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLSTP++GDLNHL+S TMSG
Sbjct: 176 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSG 235
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
VT CLRFPGQLN+DLRKLAVN++P
Sbjct: 236 VTCCLRFPGQLNSDLRKLAVNLIP 259
Score = 148 bits (358), Expect = 3e-36
Identities = 75/105 (71%), Positives = 82/105 (78%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PRLHFFM GFAPLTSRGS+QYR LTVPELTQQM+DAKNMM A DPRHGRYL+ +A+FRG+
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGK 320
Query: 436 MSMKEVDEQMLNIQNKNFLILRGMDPPTNVKDRVWRDSPLVGLKM 570
MS KEVDEQMLN+QNKN P NVK V D P GLKM
Sbjct: 321 MSTKEVDEQMLNVQNKNSSYFVEW-IPNNVKSTVC-DIPPTGLKM 363
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 156 bits (379), Expect = 9e-39
Identities = 70/84 (83%), Positives = 78/84 (92%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
SDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+S TMSG
Sbjct: 176 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG 235
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
VT CLRFPGQLN+DLRKLAVN++P
Sbjct: 236 VTCCLRFPGQLNSDLRKLAVNLIP 259
Score = 148 bits (358), Expect = 3e-36
Identities = 74/105 (70%), Positives = 83/105 (79%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PRLHFFM GFAPLTSRGS+QYR+LTVPELTQQM+D+KNMM A DPRHGRYL+ +A+FRG+
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGK 320
Query: 436 MSMKEVDEQMLNIQNKNFLILRGMDPPTNVKDRVWRDSPLVGLKM 570
MS KEVDEQMLN+QNKN P NVK V D P GLKM
Sbjct: 321 MSTKEVDEQMLNVQNKNSSYFVEW-IPNNVKSTVC-DIPPTGLKM 363
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 156 bits (379), Expect = 9e-39
Identities = 70/84 (83%), Positives = 78/84 (92%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
SDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+S TMSG
Sbjct: 176 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG 235
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
VT CLRFPGQLN+DLRKLAVN++P
Sbjct: 236 VTCCLRFPGQLNSDLRKLAVNLIP 259
Score = 148 bits (358), Expect = 3e-36
Identities = 74/105 (70%), Positives = 83/105 (79%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PRLHFFM GFAPLTSRGS+QYR+LTVPELTQQM+D+KNMM A DPRHGRYL+ +A+FRG+
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGK 320
Query: 436 MSMKEVDEQMLNIQNKNFLILRGMDPPTNVKDRVWRDSPLVGLKM 570
MS KEVDEQMLN+QNKN P NVK V D P GLKM
Sbjct: 321 MSTKEVDEQMLNVQNKNSSYFVEW-IPNNVKSTVC-DIPPTGLKM 363
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 156 bits (379), Expect = 9e-39
Identities = 70/84 (83%), Positives = 78/84 (92%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
SDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+S TMSG
Sbjct: 176 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG 235
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
VT CLRFPGQLN+DLRKLAVN++P
Sbjct: 236 VTCCLRFPGQLNSDLRKLAVNLIP 259
Score = 149 bits (362), Expect = 1e-36
Identities = 75/105 (71%), Positives = 83/105 (79%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PRLHFFM GFAPLTSRGS+QYRALTVPELTQQM+DAKNMM A DPRHGRYL+ +A+FRG+
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGK 320
Query: 436 MSMKEVDEQMLNIQNKNFLILRGMDPPTNVKDRVWRDSPLVGLKM 570
MS KEVDEQM+N+QNKN P NVK V D P GLKM
Sbjct: 321 MSTKEVDEQMINVQNKNSSYFVEW-IPNNVKSTVC-DIPPTGLKM 363
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 156 bits (379), Expect = 9e-39
Identities = 70/84 (83%), Positives = 78/84 (92%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
SDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+S TMSG
Sbjct: 176 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG 235
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
VT CLRFPGQLN+DLRKLAVN++P
Sbjct: 236 VTCCLRFPGQLNSDLRKLAVNLIP 259
Score = 143 bits (347), Expect = 7e-35
Identities = 72/105 (68%), Positives = 82/105 (78%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PRLHFFM GFAPLTSRGS+QYRALTVPELTQQM+D+KNMM A DPRHGRYL+ +A+FRG+
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGK 320
Query: 436 MSMKEVDEQMLNIQNKNFLILRGMDPPTNVKDRVWRDSPLVGLKM 570
MS KEVDEQM+N+QNKN P NVK V +P GL M
Sbjct: 321 MSTKEVDEQMINVQNKNSSYFVEW-IPNNVKSSVCDIAPR-GLSM 363
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 156 bits (378), Expect = 1e-38
Identities = 70/84 (83%), Positives = 77/84 (91%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
SDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+ PT+GDLNHL+S TMSG
Sbjct: 176 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSG 235
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
VT CLRFPGQLN+DLRKLAVN++P
Sbjct: 236 VTCCLRFPGQLNSDLRKLAVNLIP 259
Score = 142 bits (345), Expect = 1e-34
Identities = 72/105 (68%), Positives = 82/105 (78%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PRLHFFM GFAPLTSRGS+QY AL+VPELTQQM+DAKNMM A DPRHGRYL+ +A+FRG+
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGK 320
Query: 436 MSMKEVDEQMLNIQNKNFLILRGMDPPTNVKDRVWRDSPLVGLKM 570
+S KEVDEQM+NIQNKN P NVK V +P GLKM
Sbjct: 321 LSTKEVDEQMMNIQNKNSSYFVEW-IPNNVKSSVCDIAP-KGLKM 363
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 156 bits (378), Expect = 1e-38
Identities = 70/84 (83%), Positives = 77/84 (91%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
SDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+ PT+GDLNHL+S TMSG
Sbjct: 176 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSG 235
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
VT CLRFPGQLN+DLRKLAVN++P
Sbjct: 236 VTCCLRFPGQLNSDLRKLAVNLIP 259
Score = 144 bits (349), Expect = 4e-35
Identities = 72/105 (68%), Positives = 82/105 (78%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PRLHFFM GFAPLTSRGS+QY AL+VPELTQQM+DAKNMM A DPRHGRYL+ +A+FRG+
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGK 320
Query: 436 MSMKEVDEQMLNIQNKNFLILRGMDPPTNVKDRVWRDSPLVGLKM 570
MS KEVDEQM+N+QNKN P NVK V +P GLKM
Sbjct: 321 MSTKEVDEQMMNVQNKNSSYFVEW-IPNNVKSSVCDIAP-TGLKM 363
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 153 bits (372), Expect = 6e-38
Identities = 70/84 (83%), Positives = 77/84 (91%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
SDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLSTP++GDLNHL+S TMSG
Sbjct: 177 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSG 236
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
VT LRFPGQLN+DLRKLAVN++P
Sbjct: 237 VTCSLRFPGQLNSDLRKLAVNLIP 260
Score = 143 bits (347), Expect = 7e-35
Identities = 72/105 (68%), Positives = 82/105 (78%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PRLHFFM GFAPLTSRGS+QY +LTVPELTQQM+DAKNMM A DPRHGRYL+ +A+FRG+
Sbjct: 262 PRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGK 321
Query: 436 MSMKEVDEQMLNIQNKNFLILRGMDPPTNVKDRVWRDSPLVGLKM 570
MS KEVDEQ+LN+QNKN P NVK V D P G+KM
Sbjct: 322 MSTKEVDEQILNVQNKNSSYFVEW-IPNNVKSSVC-DIPPTGIKM 364
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 153 bits (372), Expect = 6e-38
Identities = 70/84 (83%), Positives = 77/84 (91%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
SDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLSTP++GDLNHL+S TMSG
Sbjct: 177 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSG 236
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
VT LRFPGQLN+DLRKLAVN++P
Sbjct: 237 VTCSLRFPGQLNSDLRKLAVNLIP 260
Score = 143 bits (347), Expect = 7e-35
Identities = 74/105 (70%), Positives = 82/105 (78%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PRLHFFM GFAPLTSRGS+QY +LTVPELTQQM+D+KNMM A DPRHGRYL+ +AIFRG+
Sbjct: 262 PRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADPRHGRYLTASAIFRGQ 321
Query: 436 MSMKEVDEQMLNIQNKNFLILRGMDPPTNVKDRVWRDSPLVGLKM 570
MS KEVDEQ+LNIQNKN P NVK V D P GLKM
Sbjct: 322 MSTKEVDEQILNIQNKNSSYFVEW-IPNNVKSSVC-DIPPKGLKM 364
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 101 bits (241), Expect = 5e-22
Identities = 44/84 (52%), Positives = 59/84 (70%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S T+S
Sbjct: 178 STAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYSNLNRLISQTISS 237
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+TT LRF G +N D+ + N+VP
Sbjct: 238 LTTSLRFDGAINVDITEFQTNLVP 261
Score = 73.3 bits (172), Expect = 1e-13
Identities = 29/76 (38%), Positives = 48/76 (63%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF + +AP+ S + +VPE+T +F+ NMMA CDPRHG+Y++ ++RG
Sbjct: 263 PRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPSNMMAKCDPRHGKYMACCLMYRGD 322
Query: 436 MSMKEVDEQMLNIQNK 483
+ K+V+ + I+ K
Sbjct: 323 VVPKDVNTAVAAIKAK 338
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 98.3 bits (234), Expect = 3e-21
Identities = 44/84 (52%), Positives = 59/84 (70%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S +VVEPYN+ LS H L+E+TD + +DNEA+YDIC R+L + PTY +LN LVS +S
Sbjct: 178 STSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISS 237
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+T LRF G LN D+ + N+VP
Sbjct: 238 LTASLRFDGALNVDVTEFQTNLVP 261
Score = 67.7 bits (158), Expect = 5e-12
Identities = 28/76 (36%), Positives = 47/76 (61%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF + +AP+ S + L+V E+T F+ +MMA CDPRHG+Y++ ++RG
Sbjct: 263 PRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGD 322
Query: 436 MSMKEVDEQMLNIQNK 483
+ K+V+ + I+ K
Sbjct: 323 VVPKDVNAAVGTIKTK 338
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 98.3 bits (234), Expect = 3e-21
Identities = 44/84 (52%), Positives = 59/84 (70%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S +VVEPYN+ LS H L+E+TD + +DNEA+YDIC R+L + PTY +LN LVS +S
Sbjct: 178 STSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISS 237
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+T LRF G LN D+ + N+VP
Sbjct: 238 LTASLRFDGALNVDVTEFQTNLVP 261
Score = 67.7 bits (158), Expect = 5e-12
Identities = 28/76 (36%), Positives = 47/76 (61%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF + +AP+ S + L+V E+T F+ +MMA CDPRHG+Y++ ++RG
Sbjct: 263 PRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGD 322
Query: 436 MSMKEVDEQMLNIQNK 483
+ K+V+ + I+ K
Sbjct: 323 VVPKDVNAAVGTIKTK 338
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 98.3 bits (234), Expect = 3e-21
Identities = 44/84 (52%), Positives = 59/84 (70%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S +VVEPYN+ LS H L+E+TD + +DNEA+YDIC R+L + PTY +LN LVS +S
Sbjct: 178 STSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISS 237
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+T LRF G LN D+ + N+VP
Sbjct: 238 LTASLRFDGALNVDVTEFQTNLVP 261
Score = 67.7 bits (158), Expect = 5e-12
Identities = 28/76 (36%), Positives = 47/76 (61%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF + +AP+ S + L+V E+T F+ +MMA CDPRHG+Y++ ++RG
Sbjct: 263 PRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGD 322
Query: 436 MSMKEVDEQMLNIQNK 483
+ K+V+ + I+ K
Sbjct: 323 VVPKDVNAAVGTIKTK 338
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 98.3 bits (234), Expect = 3e-21
Identities = 44/84 (52%), Positives = 59/84 (70%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S +VVEPYN+ LS H L+E+TD + +DNEA+YDIC R+L + PTY +LN LVS +S
Sbjct: 178 STSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISS 237
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+T LRF G LN D+ + N+VP
Sbjct: 238 LTASLRFDGALNVDVTEFQTNLVP 261
Score = 67.7 bits (158), Expect = 5e-12
Identities = 28/76 (36%), Positives = 47/76 (61%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF + +AP+ S + L+V E+T F+ +MMA CDPRHG+Y++ ++RG
Sbjct: 263 PRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGD 322
Query: 436 MSMKEVDEQMLNIQNK 483
+ K+V+ + I+ K
Sbjct: 323 VVPKDVNAAVGTIKTK 338
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 97.9 bits (233), Expect = 4e-21
Identities = 43/84 (51%), Positives = 58/84 (69%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S +S
Sbjct: 178 STAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISS 237
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+TT LRF G +N D+ + N+VP
Sbjct: 238 LTTSLRFDGAINVDITEFQTNLVP 261
Score = 72.9 bits (171), Expect = 1e-13
Identities = 29/76 (38%), Positives = 49/76 (64%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF + +AP+ S + L+VPE+T +F+ +MMA CDPRHG+Y++ ++RG
Sbjct: 263 PRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGD 322
Query: 436 MSMKEVDEQMLNIQNK 483
+ K+V+ + I+ K
Sbjct: 323 VVPKDVNAAVGTIKTK 338
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 97.9 bits (233), Expect = 4e-21
Identities = 43/84 (51%), Positives = 58/84 (69%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
S VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S +S
Sbjct: 178 STAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISS 237
Query: 182 VTTCLRFPGQLNADLRKLAVNMVP 253
+TT LRF G +N D+ + N+VP
Sbjct: 238 LTTSLRFDGAINVDITEFQTNLVP 261
Score = 72.9 bits (171), Expect = 1e-13
Identities = 29/76 (38%), Positives = 49/76 (64%)
Frame = +1
Query: 256 PRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGR 435
PR+HF + +AP+ S + L+VPE+T +F+ +MMA CDPRHG+Y++ ++RG
Sbjct: 263 PRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGD 322
Query: 436 MSMKEVDEQMLNIQNK 483
+ K+V+ + I+ K
Sbjct: 323 VVPKDVNAAVGTIKTK 338
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 75.8 bits (178), Expect = 2e-14
Identities = 37/85 (43%), Positives = 51/85 (60%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
SD VV+PYN+ L++ +L N D +DN AL I L L+ PT+ N LVS MS
Sbjct: 179 SDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLTNPTFAQTNSLVSTVMSA 238
Query: 182 VTTCLRFPGQLNADLRKLAVNMVPS 256
TT LR+PG +N DL L +++P+
Sbjct: 239 STTTLRYPGYMNNDLVGLLASLIPT 263
Score = 45.2 bits (102), Expect = 3e-05
Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 7/108 (6%)
Frame = +1
Query: 256 PRLHFFMPGFAPLT-SRGSRQYRALTVPELTQQMFDAKNMMAACDPRH-----GRYLSVA 417
PR HF M G+ PLT R + R TV ++ +++ KN+M + R+ +Y+S+
Sbjct: 264 PRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISIL 323
Query: 418 AIFRGRMSMKEVDEQMLNIQNKNFLILRGMD-PPTNVKDRVWRDSPLV 558
I +G + +V E + I+ + ++ +D P +++ + + SP V
Sbjct: 324 NIIQGEVDPTQVHESLQRIRERK--LVNFIDWGPASIQVALSKKSPYV 369
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 75.4 bits (177), Expect = 3e-14
Identities = 37/85 (43%), Positives = 51/85 (60%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSG 181
SD VV+PYN+ L++ +L N D +DN AL I L L+ PT+ N LVS MS
Sbjct: 179 SDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERLHLTNPTFAQTNSLVSTVMSA 238
Query: 182 VTTCLRFPGQLNADLRKLAVNMVPS 256
TT LR+PG +N DL L +++P+
Sbjct: 239 STTTLRYPGYMNNDLVGLLASLIPT 263
Score = 44.8 bits (101), Expect = 4e-05
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Frame = +1
Query: 256 PRLHFFMPGFAPLT-SRGSRQYRALTVPELTQQMFDAKNMMAACDPRH-----GRYLSVA 417
PR HF M G+ PLT R + R TV ++ +++ KN+M + R+ +Y+S+
Sbjct: 264 PRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISIL 323
Query: 418 AIFRGRMSMKEVDEQMLNIQNKNFL 492
I +G + +V E + I+ + +
Sbjct: 324 NIIQGEVDPTQVHESLQRIRERKLV 348
>At5g20860.1 68418.m02477 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 512
Score = 32.3 bits (70), Expect = 0.25
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +2
Query: 2 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLST 133
S+ ++ P ++++ +LV D TY + + ++ D C R +K+ST
Sbjct: 77 SNLLIPPLSSSMGSSKLVSLEDSTYTLPSPSVSDSCERLMKMST 120
>At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1298
Score = 31.1 bits (67), Expect = 0.58
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2
Query: 38 SVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFP 205
++ LVE + ++N DIC+ S PT +L LVSL + G + RFP
Sbjct: 819 NIPNLVELSSSFQNLNNLERLDICYCRNLESLPTGINLESLVSLNLFGCSRLKRFP 874
>At5g46510.1 68418.m05727 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1353
Score = 31.1 bits (67), Expect = 0.58
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2
Query: 38 SVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFP 205
++ LVE + ++N DIC+ S PT +L LVSL + G + RFP
Sbjct: 780 NIPNLVELSSSFQNLNNLERLDICYCRNLESLPTGINLESLVSLNLFGCSRLKRFP 835
>At4g32700.1 68417.m04655 DNA-directed DNA polymerase family protein
similar to DNA helicase HEL308 [Homo sapiens]
GI:19110782; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain, PF00476: DNA polymerase family A
Length = 1548
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/59 (22%), Positives = 30/59 (50%)
Frame = +1
Query: 307 SRQYRALTVPELTQQMFDAKNMMAACDPRHGRYLSVAAIFRGRMSMKEVDEQMLNIQNK 483
S+ + +V E+ + A+ M+ A GR+ S+ ++F R+ +++ + QN+
Sbjct: 586 SKLVQEASVTEVCEAFKVARGMVQALQENAGRFSSMVSVFCERLGWHDLEGLVAKFQNR 644
>At4g00220.1 68417.m00023 LOB domain protein 30 / lateral organ
boundaries domain protein 30 (LBD30) identical to LOB
DOMAIN 30 [Arabidopsis thaliana] GI:16660632; supported
by full-length cDNA gi:16660631
Length = 228
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 89 EALYDICFRT-LKLSTPTYGDLNHLVSLTMSGVT 187
+A+ ICF +L P YG ++H+VSL V+
Sbjct: 73 DAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVS 106
>At2g09388.1 68415.m01011 hypothetical protein
Length = 153
Score = 27.5 bits (58), Expect = 7.1
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +1
Query: 229 KIGRKHGSLPRLHFFMPG 282
+I +HGS+ +HFF+PG
Sbjct: 8 RINMRHGSILAVHFFIPG 25
>At1g76350.1 68414.m08871 RWP-RK domain-containing protein similar
to nodule inception protein [Lotus japonicus]
GI:6448579; contains Pfam profile: PF02042 RWP-RK domain
Length = 808
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 182 VTTCLRFPGQLNADLRKLAVNMVPSRVSTSSC 277
V C FPGQ L +L+ + +P R S S C
Sbjct: 775 VDVCRSFPGQTIKLLLQLSSSYLPERSSVSGC 806
>At5g41720.1 68418.m05073 F-box family protein contains Pfam
PF00646: F-box domain; similar to unknown protein
(gb|AAD32901.1);
Length = 186
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 379 ACDPRHGRYLSVAAIFRGRMSMKE 450
ACD HG L V +F+GR + +
Sbjct: 99 ACDTHHGILLCVDVVFKGRQKIPD 122
>At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1234
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 137 TYGDLNHLVSLTMSGVTTCLRFPGQLN-ADLRKLAVN 244
T G+LN L L MSG +FP +N L L +N
Sbjct: 674 TIGNLNKLTYLNMSGCHNLEKFPADVNLKSLSDLVLN 710
>At2g45490.1 68415.m05658 protein kinase, putative contains protein
kinase domain, Pfam:PF00069; similar to protein kinase
p46XlEg22 [Xenopus laevis] gi|609280|emb|CAA78914
Length = 288
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 47 QLVENTDETYCIDNEALYDICFRTLKLSTP 136
++VEN D Y +DN L +C+ L + P
Sbjct: 187 EMVENRDHDYAVDNWTLGILCYEFLYGNPP 216
>At2g40290.2 68415.m04961 eukaryotic translation initiation factor 2
subunit 1, putative / eIF-2A, putative / eIF-2-alpha,
putative similar to Swiss-Prot:P05198 eukaryotic
translation initiation factor 2 subunit 1 (Eukaryotic
translation initiation factor 2 alpha subunit)
(eIF-2-alpha) (EIF- 2alpha) (EIF-2A) [Homo sapiens]
Length = 241
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 8 TVVEPYNATLSVHQLVENTDETYCIDNEALY 100
T E YN + VH ++ + ET ID E LY
Sbjct: 101 TCEERYNKSKLVHSIMRHVAETLSIDLEDLY 131
>At2g40290.1 68415.m04960 eukaryotic translation initiation factor 2
subunit 1, putative / eIF-2A, putative / eIF-2-alpha,
putative similar to Swiss-Prot:P05198 eukaryotic
translation initiation factor 2 subunit 1 (Eukaryotic
translation initiation factor 2 alpha subunit)
(eIF-2-alpha) (EIF- 2alpha) (EIF-2A) [Homo sapiens]
Length = 344
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 8 TVVEPYNATLSVHQLVENTDETYCIDNEALY 100
T E YN + VH ++ + ET ID E LY
Sbjct: 101 TCEERYNKSKLVHSIMRHVAETLSIDLEDLY 131
>At2g37590.1 68415.m04612 Dof-type zinc finger domain-containing
protein
Length = 330
Score = 27.1 bits (57), Expect = 9.4
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = +2
Query: 83 DNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPSRV 262
+ E++ +L PTY L L S T + L G L+ DLR +++M S
Sbjct: 182 NQESILSQILSPARLMNPTYNHLGDLTSNTKTDNNMSLLNYGGLSQDLR--SIHMGASGG 239
Query: 263 STSSC 277
S SC
Sbjct: 240 SLMSC 244
>At1g05360.1 68414.m00543 expressed protein Similar to Arabidopsis
hypothetical protein PID:e326839 (gb|Z97337) contains
transmembrane domains
Length = 416
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +2
Query: 530 TACGEIPPWWVSRWAANFHGKV 595
TA GE+PP+++SR A+ GK+
Sbjct: 195 TALGELPPYFISRAASLSGGKM 216
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,414,281
Number of Sequences: 28952
Number of extensions: 305763
Number of successful extensions: 933
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1180950720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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