Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30323
         (781 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       23   8.0  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    23   8.0  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    23   8.0  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   8.0  

>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 326 VPIIVLRRSPSLNELSHSHILSLHNNLCNETSCDR 430
           V + +L  +PS+N+L+H   L  +     E S DR
Sbjct: 524 VELYILDLTPSVNDLNHPFHLHGYQMFVMEMSQDR 558


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +2

Query: 2   PTNPSLLPMVTDTASLPTTGPPLLSTAYPTTESSA 106
           P+ PSL P+    A+   +  PL S   PT  S+A
Sbjct: 74  PSVPSLKPVAGAPAAPGPSALPLSSRKSPTVSSAA 108


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +2

Query: 2   PTNPSLLPMVTDTASLPTTGPPLLSTAYPTTESSA 106
           P+ PSL P+    A+   +  PL S   PT  S+A
Sbjct: 74  PSVPSLKPVAGAPAAPGPSALPLSSRKSPTVSSAA 108


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +1

Query: 61   PPAPVYGVPHDRIVGIELEHLQQAIQVAQYHQAEE 165
            PP    G+P  +   I+L+ +QQ +Q  Q HQ ++
Sbjct: 1273 PPNTPNGMPTHQHSQIQLQPIQQPLQTLQ-HQYQQ 1306


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,834
Number of Sequences: 2352
Number of extensions: 10992
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)