Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30323
         (781 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119132-1|AAM50992.1|  188|Drosophila melanogaster RE35358p pro...    42   7e-04
AE014297-4805|AAF57194.1|  188|Drosophila melanogaster CG2150-PA...    42   7e-04
X71976-1|CAA50796.1|  188|Drosophila melanogaster GCR 1 protein ...    41   0.002
AE014296-1693|AAF50239.2| 1937|Drosophila melanogaster CG3280-PA...    31   1.3  
AY071711-1|AAL49333.1|  225|Drosophila melanogaster RH24988p pro...    29   9.5  
AE014297-2574|AAF55589.1|  225|Drosophila melanogaster CG7714-PA...    29   9.5  
AE014296-827|AAN11598.1|  611|Drosophila melanogaster CG15013-PC...    29   9.5  
AE014296-826|AAG22249.1|  611|Drosophila melanogaster CG15013-PB...    29   9.5  
AE014296-825|AAF47884.1|  611|Drosophila melanogaster CG15013-PA...    29   9.5  

>AY119132-1|AAM50992.1|  188|Drosophila melanogaster RE35358p
           protein.
          Length = 188

 Score = 42.3 bits (95), Expect = 7e-04
 Identities = 21/38 (55%), Positives = 27/38 (71%), Gaps = 4/38 (10%)
 Frame = +1

Query: 55  YGPPAPVYGVPH----DRIVGIELEHLQQAIQVAQYHQ 156
           YGPP+  YG P      R+VGI+LE ++QAIQVAQ+ Q
Sbjct: 117 YGPPSTSYGAPGIGGGGRVVGIDLEGVRQAIQVAQFAQ 154


>AE014297-4805|AAF57194.1|  188|Drosophila melanogaster CG2150-PA
           protein.
          Length = 188

 Score = 42.3 bits (95), Expect = 7e-04
 Identities = 21/38 (55%), Positives = 27/38 (71%), Gaps = 4/38 (10%)
 Frame = +1

Query: 55  YGPPAPVYGVPH----DRIVGIELEHLQQAIQVAQYHQ 156
           YGPP+  YG P      R+VGI+LE ++QAIQVAQ+ Q
Sbjct: 117 YGPPSTSYGAPGIGGGGRVVGIDLEGVRQAIQVAQFAQ 154


>X71976-1|CAA50796.1|  188|Drosophila melanogaster GCR 1 protein
           protein.
          Length = 188

 Score = 40.7 bits (91), Expect = 0.002
 Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 4/38 (10%)
 Frame = +1

Query: 55  YGPPAPVYGVPH----DRIVGIELEHLQQAIQVAQYHQ 156
           YGPP+  YG P      R+VGI+LE ++QAIQV Q+ Q
Sbjct: 117 YGPPSTSYGAPGIGGGGRVVGIDLEGVRQAIQVVQFAQ 154


>AE014296-1693|AAF50239.2| 1937|Drosophila melanogaster CG3280-PA
           protein.
          Length = 1937

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 17/31 (54%), Positives = 19/31 (61%)
 Frame = +2

Query: 2   PTNPSLLPMVTDTASLPTTGPPLLSTAYPTT 94
           PT P+ LP    T +LPTT P  L TA PTT
Sbjct: 645 PTLPTTLPTTFPT-TLPTTLPTTLPTALPTT 674



 Score = 29.1 bits (62), Expect = 7.2
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +2

Query: 5   TNPSLLPMVTDTASLPTTGPPLLSTAYPTTESSA 106
           T P+++P    T +LPTT P  L T  PTT  +A
Sbjct: 638 TTPAMVPPTLPT-TLPTTFPTTLPTTLPTTLPTA 670


>AY071711-1|AAL49333.1|  225|Drosophila melanogaster RH24988p
           protein.
          Length = 225

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +2

Query: 2   PTNPSLLPMVTDTASLPTTGPPLL-STAYPTTESS 103
           P N + +P+ T T   PTTG  +  +TA PTT +S
Sbjct: 104 PINVTCVPISTVTTVAPTTGTTIAPTTASPTTAAS 138


>AE014297-2574|AAF55589.1|  225|Drosophila melanogaster CG7714-PA
           protein.
          Length = 225

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +2

Query: 2   PTNPSLLPMVTDTASLPTTGPPLL-STAYPTTESS 103
           P N + +P+ T T   PTTG  +  +TA PTT +S
Sbjct: 104 PINVTCVPISTVTTVAPTTGTTIAPTTASPTTAAS 138


>AE014296-827|AAN11598.1|  611|Drosophila melanogaster CG15013-PC,
          isoform C protein.
          Length = 611

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +1

Query: 55 YGPPAPVYGVP 87
          YGPPAP+YG P
Sbjct: 46 YGPPAPIYGAP 56


>AE014296-826|AAG22249.1|  611|Drosophila melanogaster CG15013-PB,
          isoform B protein.
          Length = 611

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +1

Query: 55 YGPPAPVYGVP 87
          YGPPAP+YG P
Sbjct: 46 YGPPAPIYGAP 56


>AE014296-825|AAF47884.1|  611|Drosophila melanogaster CG15013-PA,
          isoform A protein.
          Length = 611

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +1

Query: 55 YGPPAPVYGVP 87
          YGPPAP+YG P
Sbjct: 46 YGPPAPIYGAP 56


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,827,914
Number of Sequences: 53049
Number of extensions: 506004
Number of successful extensions: 1649
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1644
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)