Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30321
(671 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ... 36 0.026
U80844-4|AAB37974.1| 192|Caenorhabditis elegans Hypothetical pr... 33 0.24
AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical... 33 0.24
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 31 0.75
AF016681-18|AAO91734.1| 330|Caenorhabditis elegans Serpentine r... 31 0.75
AC006730-9|AAO91686.1| 330|Caenorhabditis elegans Serpentine re... 31 0.75
U88308-9|AAB42325.1| 933|Caenorhabditis elegans Patched related... 29 3.0
U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in bl... 29 3.0
AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical... 29 4.0
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 29 4.0
Z68338-5|CAA92758.1| 203|Caenorhabditis elegans Hypothetical pr... 28 5.3
U78953-1|AAB38323.1| 185|Caenorhabditis elegans basic helix-loo... 28 5.3
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 28 5.3
AF106579-5|AAC78198.1| 174|Caenorhabditis elegans Hypothetical ... 28 5.3
U64833-8|AAB04820.1| 432|Caenorhabditis elegans Hypothetical pr... 28 6.9
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 28 6.9
AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein. 28 6.9
AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical ... 28 6.9
AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical ... 28 6.9
AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical ... 28 6.9
AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical ... 28 6.9
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 28 6.9
Z81527-6|CAB04275.1| 739|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81464-7|CAB03857.2| 338|Caenorhabditis elegans Hypothetical pr... 27 9.2
U80441-11|AAB37660.3| 1037|Caenorhabditis elegans Hypothetical p... 27 9.2
>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
protein H11E01.3 protein.
Length = 1464
Score = 35.9 bits (79), Expect = 0.026
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Frame = +2
Query: 254 NSSYIHASPVVQHFSPVQHAPVVHHAAI--PIAVEHSDHVE--DHAPA--KYEF--SYSV 409
+S+ H+S +H + +PV + ++ P A EH +H E H+PA + EF S SV
Sbjct: 702 SSNQFHSS---EHIEEARQSPVTNQESVHSPHASEHFEHREVVPHSPAASQEEFGRSPSV 758
Query: 410 EDPHTGDHKSQHE 448
PH +H HE
Sbjct: 759 HSPHVSEHFEHHE 771
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/68 (23%), Positives = 26/68 (38%)
Frame = +2
Query: 245 PRGNSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHT 424
P S + +S +HF +H V + S+H+E+ + SV PH
Sbjct: 675 PAARSPSVQSSRTSEHF---EHRGEVPQSPSSNQFHSSEHIEEARQSPVTNQESVHSPHA 731
Query: 425 GDHKSQHE 448
+H E
Sbjct: 732 SEHFEHRE 739
>U80844-4|AAB37974.1| 192|Caenorhabditis elegans Hypothetical
protein C07D8.2 protein.
Length = 192
Score = 32.7 bits (71), Expect = 0.24
Identities = 38/151 (25%), Positives = 53/151 (35%), Gaps = 6/151 (3%)
Frame = +3
Query: 135 PSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEILRIY--MLRQ*SNTSALCN 308
P A P S AAP LT AAP + P+ AA + + L ++T+
Sbjct: 25 PQRSPMAPAAPTSSAAAPTLTAAAPPSSASAPMSSAAAYHLHGQHGQQLGAPAHTNGGTT 84
Query: 309 MLQSCTTLRFQLPSNTPIMSKIMLPRSMSSHIPSRI-PTPAITSPNTKPVMVMS*KANTL 485
LQ R Q + + K + P + P T P T A L
Sbjct: 85 RLQQPLEHRIQTTTQGVLQGKREQLEQGPTETPLLVQQAPTTTGPGTPITPQRVPNARAL 144
Query: 486 YSSLMVPSQVEYT---ADHHNGFNAIVHNSE 569
+ + SQV Y A G+ + H SE
Sbjct: 145 QTHQAINSQVSYPSAGAQTPGGYRSYCHKSE 175
>AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical
protein Y116A8C.10b protein.
Length = 248
Score = 32.7 bits (71), Expect = 0.24
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +3
Query: 204 APLIQHAGPIVH-AAPVEILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIML 380
A L+ H GP+ + ++ L+I +LR +N+ L SC + N+ S
Sbjct: 153 ADLVPHKGPVSYDRLHIDSLKI-ILRGSANSITLSRFFDSCLDRTRRTSLNSSSSSFFTK 211
Query: 381 PRSMSSHIPSRIPTPAITSPN 443
PRSM+ ++P + A + N
Sbjct: 212 PRSMTPNLPGASASAAAAAAN 232
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 31.1 bits (67), Expect = 0.75
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +2
Query: 254 NSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPA 385
+SSYIH+S +QH H P + ++H H P+
Sbjct: 89 SSSYIHSSQQIQHPPQQHHPPPPSPPPVAETIQHQPHPSQQQPS 132
>AF016681-18|AAO91734.1| 330|Caenorhabditis elegans Serpentine
receptor, class i protein57 protein.
Length = 330
Score = 31.1 bits (67), Expect = 0.75
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +1
Query: 88 ATAMLC-LPKASFAMTSLL-IKQRHIIPQY*VMLLQY*LTQPL*FNMPVLLFTPPPW-KF 258
AT+++C LP S L + +I + ++L+ L P N+ VL+FT PP+ KF
Sbjct: 246 ATSIICFLPPISLVFVVFLKLPNPQVIVE--LLLVVACLHSPA--NVTVLMFTFPPYRKF 301
Query: 259 FVYTCFASSPT-LQPCATCSS 318
T F PT L+P + SS
Sbjct: 302 VCVTIFRQKPTGLEPISAKSS 322
>AC006730-9|AAO91686.1| 330|Caenorhabditis elegans Serpentine
receptor, class i protein78 protein.
Length = 330
Score = 31.1 bits (67), Expect = 0.75
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +1
Query: 88 ATAMLC-LPKASFAMTSLL-IKQRHIIPQY*VMLLQY*LTQPL*FNMPVLLFTPPPW-KF 258
AT+++C LP S L + +I + ++L+ L P N+ VL+FT PP+ KF
Sbjct: 246 ATSIICFLPPISLVFVVFLKLPNPQVIVE--LLLVVACLHSPA--NVTVLMFTFPPYRKF 301
Query: 259 FVYTCFASSPT-LQPCATCSS 318
T F PT L+P + SS
Sbjct: 302 VCVTIFRQKPTGLEPISAKSS 322
>U88308-9|AAB42325.1| 933|Caenorhabditis elegans Patched related
family protein 2 protein.
Length = 933
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 445 VLGLVIAGVGILDGI*ELILRGSMIFDMIGV 353
+LG+V AG+ IL G+ L L G D++GV
Sbjct: 304 ILGVVSAGIAILTGVGFLSLMGMPYNDIVGV 334
>U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 3 protein.
Length = 242
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +2
Query: 164 PSIESCCSSTDSRSPFDSTCRSYCSRRPRGNSSYIHASPVVQHFSPVQHAPVVHHAAIP 340
P+ + C + +PF + C+S C + + +S A+ +PVQH P P
Sbjct: 21 PACQQSCQNQCKSAPFVNQCQSSCQQNCQTSSCSASAT-----LAPVQHVPQCQQQCAP 74
>AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical
protein Y18H1A.9 protein.
Length = 488
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +2
Query: 113 KHRSP*RAFSSSNGTLYPSIESCCSSTDSRSPFD 214
K+RSP + + G P +CC D FD
Sbjct: 247 KNRSPPKCIQQATGLFQPPTTTCCQGVDLNRNFD 280
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 164 PSIESCCSSTDSRSPFDSTCRSYCSRRPRGNSSYIHASPVVQHFSPVQHAP 316
P+ + C +PF + C+S C + + +S Y A+P +PVQ P
Sbjct: 106 PACQQSCQMQCQSAPFVNECQSQCQQSCQTSSCYAPAAP-----APVQCMP 151
>Z68338-5|CAA92758.1| 203|Caenorhabditis elegans Hypothetical
protein T24B8.6 protein.
Length = 203
Score = 28.3 bits (60), Expect = 5.3
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +3
Query: 318 SCTTLRFQLPSNTPIMSKI-MLPRSMSSHIPSRIPTPAITSPNTKPVMVMS*KANTL--- 485
S T+ +P++ P + + P+S+ S + ++ P+P+ TSP P +MS + +
Sbjct: 119 SSTSFHNSMPADFPTPEQSPVYPQSVCSMM-AQTPSPSYTSPYYPPPQMMSSNQHDMSSH 177
Query: 486 YSSLMVPSQVEYTADHHNGFN 548
Y S + DHH+ ++
Sbjct: 178 YYQESSSSSASTSGDHHSFYS 198
>U78953-1|AAB38323.1| 185|Caenorhabditis elegans basic
helix-loop-helix DNA bindingprotein HLH-3 protein.
Length = 185
Score = 28.3 bits (60), Expect = 5.3
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +3
Query: 318 SCTTLRFQLPSNTPIMSKI-MLPRSMSSHIPSRIPTPAITSPNTKPVMVMS*KANTL--- 485
S T+ +P++ P + + P+S+ S + ++ P+P+ TSP P +MS + +
Sbjct: 86 SSTSFHNSMPADFPTPEQSPVYPQSVCSMM-AQTPSPSYTSPYYPPPQMMSSNQHDMSSH 144
Query: 486 YSSLMVPSQVEYTADHHNGFN 548
Y S + DHH+ ++
Sbjct: 145 YYQESSSSSASTSGDHHSFYS 165
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/60 (28%), Positives = 19/60 (31%), Gaps = 1/60 (1%)
Frame = +2
Query: 269 HASPVVQ-HFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQH 445
H SP H HAP H H H E H + + H G H S H
Sbjct: 497 HHSPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHH 556
>AF106579-5|AAC78198.1| 174|Caenorhabditis elegans Hypothetical
protein F54E2.2 protein.
Length = 174
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3
Query: 330 AWCTTGACCTGLKCWTTG 277
+WCTT C G KC TG
Sbjct: 150 SWCTTDQDCKGKKCCPTG 167
>U64833-8|AAB04820.1| 432|Caenorhabditis elegans Hypothetical
protein B0507.3 protein.
Length = 432
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 405 PSRIPTPAITSPNTKPVMVMS*KANTLYSSLMVPSQVEYTA 527
PS IPTPA+ SPN V S + + + ++ QVE A
Sbjct: 313 PSVIPTPAMMSPNPAMVQKSSKPSTPIPAPPVLVPQVELPA 353
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -1
Query: 467 RHHHHGFRVGTCDRRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQR 327
RH HHG R G R G RRN S D D+ R+Q+ ++
Sbjct: 85 RHGHHG-RHGM-GRHGGHGRRNKSGSDSDSSDSSEDKKKRKQMRDKK 129
>AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.
Length = 1666
Score = 27.9 bits (59), Expect = 6.9
Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 6/115 (5%)
Frame = +2
Query: 164 PSIESCCSSTDSRSPFDSTCRSYCSRRPRG----NSSYIHASPVVQHFSPVQHAPV-VHH 328
P E S + + FDS R+P ++S + S V SP+ P +H+
Sbjct: 296 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 353
Query: 329 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 490
+ I + + H+ H +E V + SQH DG ++G ++ +
Sbjct: 354 LPVLIVMNNDGHLSTHRITLHEGVTGVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 408
>AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical
protein W03F11.6e protein.
Length = 1039
Score = 27.9 bits (59), Expect = 6.9
Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 6/115 (5%)
Frame = +2
Query: 164 PSIESCCSSTDSRSPFDSTCRSYCSRRPRG----NSSYIHASPVVQHFSPVQHAPV-VHH 328
P E S + + FDS R+P ++S + S V SP+ P +H+
Sbjct: 294 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 351
Query: 329 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 490
+ I + + H+ H +E V + SQH DG ++G ++ +
Sbjct: 352 LPVLIVMNNDGHLSTHRITLHEGVTEVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 406
>AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical
protein W03F11.6d protein.
Length = 1184
Score = 27.9 bits (59), Expect = 6.9
Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 6/115 (5%)
Frame = +2
Query: 164 PSIESCCSSTDSRSPFDSTCRSYCSRRPRG----NSSYIHASPVVQHFSPVQHAPV-VHH 328
P E S + + FDS R+P ++S + S V SP+ P +H+
Sbjct: 294 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 351
Query: 329 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 490
+ I + + H+ H +E V + SQH DG ++G ++ +
Sbjct: 352 LPVLIVMNNDGHLSTHRITLHEGVTEVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 406
>AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical
protein W03F11.6c protein.
Length = 1419
Score = 27.9 bits (59), Expect = 6.9
Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 6/115 (5%)
Frame = +2
Query: 164 PSIESCCSSTDSRSPFDSTCRSYCSRRPRG----NSSYIHASPVVQHFSPVQHAPV-VHH 328
P E S + + FDS R+P ++S + S V SP+ P +H+
Sbjct: 294 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 351
Query: 329 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 490
+ I + + H+ H +E V + SQH DG ++G ++ +
Sbjct: 352 LPVLIVMNNDGHLSTHRITLHEGVTEVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 406
>AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical
protein W03F11.6a protein.
Length = 1658
Score = 27.9 bits (59), Expect = 6.9
Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 6/115 (5%)
Frame = +2
Query: 164 PSIESCCSSTDSRSPFDSTCRSYCSRRPRG----NSSYIHASPVVQHFSPVQHAPV-VHH 328
P E S + + FDS R+P ++S + S V SP+ P +H+
Sbjct: 294 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 351
Query: 329 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 490
+ I + + H+ H +E V + SQH DG ++G ++ +
Sbjct: 352 LPVLIVMNNDGHLSTHRITLHEGVTEVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 406
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Frame = -1
Query: 491 GVESIRLSRHHHHGFRVGTC--DRRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQRGAR 318
G + R + HHH R D R D R R H + R DR R S+R R
Sbjct: 271 GADRKRSTEQHHHSHRSSRDHRDHRHRDHRGEHREHREHKEHRRDDR--HRSERSERSER 328
Query: 317 LE 312
E
Sbjct: 329 SE 330
>Z81527-6|CAB04275.1| 739|Caenorhabditis elegans Hypothetical
protein F35E12.7a protein.
Length = 739
Score = 27.5 bits (58), Expect = 9.2
Identities = 29/126 (23%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
Frame = +3
Query: 162 TPVLSHAAPVLTHAAPLIQHAGPIV---HAAPVEILRIYMLRQ*SNTSALCNMLQSCTTL 332
T V S APV++ I + ++P+ + S+T+ +QS TT
Sbjct: 501 TRVSSSTAPVVSTVTSTITSQSIVTTNKSSSPITSKTTTSINVSSSTTKSTRPMQSTTTY 560
Query: 333 RFQLPSNTPIMSKIMLPRSMSSHIPSRIPTPAITSPNTKPVMVMS*KANTLYSSLMV-PS 509
+ +L + S +P + + + I TP+ +P T P ++ + + T S +++ S
Sbjct: 561 Q-KLAQASSTASTTPIPITTQNISTASIATPSTKTPIT-PSLITTRSSTTKLSPIVITKS 618
Query: 510 QVEYTA 527
+ YTA
Sbjct: 619 SLAYTA 624
>Z81464-7|CAB03857.2| 338|Caenorhabditis elegans Hypothetical
protein C08E8.2 protein.
Length = 338
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = -1
Query: 395 THTSREHDLRHDRSVRRQLESQRGARLEH--VAQG*SVGLLAKHVYTKN 255
TH+S HD RH ++ LE Q R+ H ++ G +V +LAK++Y N
Sbjct: 139 THSSIRHDCRHFFNL--VLEHQGDGRILHLKISTG-TVKVLAKNLYFPN 184
>U80441-11|AAB37660.3| 1037|Caenorhabditis elegans Hypothetical
protein F27C1.11 protein.
Length = 1037
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
Frame = +2
Query: 104 VFPKHRSP*RAFS-----SSNGTLYPSIE--SCCSSTDSRSPFDSTCRSYCSRRPRGN 256
+ PK +P A+S SS G P+ S +S + R P S Y SRRP+ N
Sbjct: 145 ILPKRYAPREAYSISEKKSSTGGSDPATSGNSSGNSIEKRQPLPSINNRYVSRRPQEN 202
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,081,666
Number of Sequences: 27780
Number of extensions: 372927
Number of successful extensions: 1374
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1357
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -