Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30318
         (468 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3684|AAF56376.1| 2768|Drosophila melanogaster CG13648-P...    50   2e-06
AY118897-1|AAM50757.1|  566|Drosophila melanogaster LD07633p pro...    29   2.4  
AY075500-1|AAL68310.1|  293|Drosophila melanogaster RE51713p pro...    28   7.2  
AE014297-321|AAF51976.1|  293|Drosophila melanogaster CG1245-PA ...    28   7.2  

>AE014297-3684|AAF56376.1| 2768|Drosophila melanogaster CG13648-PA
            protein.
          Length = 2768

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 18/31 (58%), Positives = 26/31 (83%)
 Frame = +3

Query: 3    GDGQMKCDPKACTPEPMLRQMIAAAVSAKRR 95
            GDG+MKCDP+ C PEP ++Q++AA VS ++R
Sbjct: 2738 GDGKMKCDPQQCVPEPTMQQVMAAVVSGRKR 2768


>AY118897-1|AAM50757.1|  566|Drosophila melanogaster LD07633p
           protein.
          Length = 566

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 118 YQLSRKSLHKGNKLCEKKNASTLLCTWNNAPIHL 219
           YQ   + LH GN L E  N   ++CT+ ++ + L
Sbjct: 412 YQFEHRDLHLGNILIEYTNKKHIVCTFKSSNLTL 445


>AY075500-1|AAL68310.1|  293|Drosophila melanogaster RE51713p
           protein.
          Length = 293

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = +1

Query: 97  DEHFSTFYQLSRKSLHKGNKLCEKKNASTLLCTWNNAPIHLSR 225
           D  F  F  L++ +L +    C +K       ++NN P H+ +
Sbjct: 108 DHSFLAFNNLNQNTLRRSYNYCSQKRQRLPFSSFNNDPDHIDK 150


>AE014297-321|AAF51976.1|  293|Drosophila melanogaster CG1245-PA
           protein.
          Length = 293

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = +1

Query: 97  DEHFSTFYQLSRKSLHKGNKLCEKKNASTLLCTWNNAPIHLSR 225
           D  F  F  L++ +L +    C +K       ++NN P H+ +
Sbjct: 108 DHSFLAFNNLNQNTLRRSYNYCSQKRQRLPFSSFNNDPDHIDK 150


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,918,198
Number of Sequences: 53049
Number of extensions: 331005
Number of successful extensions: 485
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1580609772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)