Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30314
         (703 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    25   0.45 
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   3.2  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   3.2  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   3.2  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   3.2  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   3.2  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = -1

Query: 184 LMLENSVSITEKSPSLMGIFLLRPLSAIFHVICRVEIVETKQTLKRSRVNDFHWNNTHS 8
           L++ N VSIT++ P+     +    S  F  +  ++   T   +  S++N FHW+ T S
Sbjct: 194 LLMPNDVSITDE-PAYQYRGIALDTSRNFVTVDVIK--RTLDGMAASKLNSFHWHITDS 249


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 641 HHGPGTFPIPEALE 682
           HH P  FP PE  +
Sbjct: 395 HHNPNVFPDPEKFD 408


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +1

Query: 40  RENVSVFV*FLQFPRGK*REKWLTVVSREISPSSLA 147
           R+ + +F+  +Q    K   K  TVV+RE+  +S+A
Sbjct: 331 RKEIDIFLVAIQMNPPKVSLKGYTVVNRELVTASVA 366


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +1

Query: 40  RENVSVFV*FLQFPRGK*REKWLTVVSREISPSSLA 147
           R+ + +F+  +Q    K   K  TVV+RE+  +S+A
Sbjct: 331 RKEIDIFLVAIQMNPPKVSLKGYTVVNRELVTASVA 366


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +1

Query: 40  RENVSVFV*FLQFPRGK*REKWLTVVSREISPSSLA 147
           R+ + +F+  +Q    K   K  TVV+RE+  +S+A
Sbjct: 331 RKEIDIFLVAIQMNPPKVSLKGYTVVNRELVTASVA 366


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 641 HHGPGTFPIPEALE 682
           HH P  FP PE  +
Sbjct: 395 HHNPNVFPDPEKFD 408


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,471
Number of Sequences: 336
Number of extensions: 3451
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)