Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30314
(703 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 52 5e-07
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 52 5e-07
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 45 6e-05
Z78546-6|CAB54307.1| 642|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z78545-5|CAB01764.2| 642|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 4.3
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 4.3
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 4.3
Z82095-7|CAN86628.1| 390|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z82095-6|CAI79281.2| 412|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z82095-5|CAB05026.2| 414|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z68751-6|CAA92976.1| 202|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z75532-3|CAA99810.1| 660|Caenorhabditis elegans Hypothetical pr... 28 7.4
AC024772-2|AAF60537.2| 756|Caenorhabditis elegans Osm-9 and cap... 28 7.4
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z83221-6|CAB05703.3| 210|Caenorhabditis elegans Hypothetical pr... 27 9.8
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 51.6 bits (118), Expect = 5e-07
Identities = 21/42 (50%), Positives = 32/42 (76%)
Frame = +3
Query: 120 KRNIPIKLGDFSVIDTEFSSIRERFDAEMRKMEEEMSKFRSE 245
+R I + ++SVID EF ++R+RF+ EMR++EEEM + RSE
Sbjct: 3 ERRIDVNRSNYSVIDNEFGNMRDRFEQEMRRVEEEMKRLRSE 44
Score = 44.8 bits (101), Expect = 6e-05
Identities = 23/56 (41%), Positives = 31/56 (55%)
Frame = +1
Query: 400 KLRFDVSQYTPRRDRLLRLSTTNYLVHAKHEGNLIRICVXXLHQGSFVAPRGTNPE 567
+LRFDV+ Y P + ++ LVHAKHE + V + F+ PRGTNPE
Sbjct: 126 RLRFDVANYKPE-EVTVKTIDNRLLVHAKHEEKTPQRTVFREYNQEFLLPRGTNPE 180
Score = 37.1 bits (82), Expect = 0.012
Identities = 26/97 (26%), Positives = 46/97 (47%)
Frame = +2
Query: 347 DSLNSPLIQDEGDGQDSPSFALMSASILPEEIGC*DCRQQITWSTPNTRGI*YESVYXDY 526
D+L SPLI+DE DG+ + A+ PEE+ ++ + +V+ +Y
Sbjct: 109 DNLKSPLIKDESDGK-TLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRTVFREY 167
Query: 527 TRGVLLPQGEQILRAIKSFAVPGTVLLTRGKRPLPQL 637
+ LLP+G + + + G + + + PLPQL
Sbjct: 168 NQEFLLPRGTNPEQISSTLSTDGVLTV---EAPLPQL 201
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 51.6 bits (118), Expect = 5e-07
Identities = 21/42 (50%), Positives = 32/42 (76%)
Frame = +3
Query: 120 KRNIPIKLGDFSVIDTEFSSIRERFDAEMRKMEEEMSKFRSE 245
+R I + ++SVID EF ++R+RF+ EMR++EEEM + RSE
Sbjct: 17 ERRIDVNRSNYSVIDNEFGNMRDRFEQEMRRVEEEMKRLRSE 58
Score = 44.8 bits (101), Expect = 6e-05
Identities = 23/56 (41%), Positives = 31/56 (55%)
Frame = +1
Query: 400 KLRFDVSQYTPRRDRLLRLSTTNYLVHAKHEGNLIRICVXXLHQGSFVAPRGTNPE 567
+LRFDV+ Y P + ++ LVHAKHE + V + F+ PRGTNPE
Sbjct: 140 RLRFDVANYKPE-EVTVKTIDNRLLVHAKHEEKTPQRTVFREYNQEFLLPRGTNPE 194
Score = 37.1 bits (82), Expect = 0.012
Identities = 26/97 (26%), Positives = 46/97 (47%)
Frame = +2
Query: 347 DSLNSPLIQDEGDGQDSPSFALMSASILPEEIGC*DCRQQITWSTPNTRGI*YESVYXDY 526
D+L SPLI+DE DG+ + A+ PEE+ ++ + +V+ +Y
Sbjct: 123 DNLKSPLIKDESDGK-TLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRTVFREY 181
Query: 527 TRGVLLPQGEQILRAIKSFAVPGTVLLTRGKRPLPQL 637
+ LLP+G + + + G + + + PLPQL
Sbjct: 182 NQEFLLPRGTNPEQISSTLSTDGVLTV---EAPLPQL 215
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 44.8 bits (101), Expect = 6e-05
Identities = 23/56 (41%), Positives = 31/56 (55%)
Frame = +1
Query: 400 KLRFDVSQYTPRRDRLLRLSTTNYLVHAKHEGNLIRICVXXLHQGSFVAPRGTNPE 567
+LRFDV+ Y P + ++ LVHAKHE + V + F+ PRGTNPE
Sbjct: 29 RLRFDVANYKPE-EVTVKTIDNRLLVHAKHEEKTPQRTVFREYNQEFLLPRGTNPE 83
Score = 37.1 bits (82), Expect = 0.012
Identities = 26/97 (26%), Positives = 46/97 (47%)
Frame = +2
Query: 347 DSLNSPLIQDEGDGQDSPSFALMSASILPEEIGC*DCRQQITWSTPNTRGI*YESVYXDY 526
D+L SPLI+DE DG+ + A+ PEE+ ++ + +V+ +Y
Sbjct: 12 DNLKSPLIKDESDGK-TLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRTVFREY 70
Query: 527 TRGVLLPQGEQILRAIKSFAVPGTVLLTRGKRPLPQL 637
+ LLP+G + + + G + + + PLPQL
Sbjct: 71 NQEFLLPRGTNPEQISSTLSTDGVLTV---EAPLPQL 104
>Z78546-6|CAB54307.1| 642|Caenorhabditis elegans Hypothetical
protein M03B6.3 protein.
Length = 642
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 156 VIDTEFSSIRERFDAEMRKMEEEMSKFRSELMNEKATISSRAQLARRHLHS 308
V+ TE + R + + + +KMEEE+ K +L EK + R + + HS
Sbjct: 297 VLQTELTEQRMKIEVQ-KKMEEELRKKEKQLEEEKQQMEQRLKEQLSNWHS 346
>Z78545-5|CAB01764.2| 642|Caenorhabditis elegans Hypothetical
protein M03B6.3 protein.
Length = 642
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 156 VIDTEFSSIRERFDAEMRKMEEEMSKFRSELMNEKATISSRAQLARRHLHS 308
V+ TE + R + + + +KMEEE+ K +L EK + R + + HS
Sbjct: 297 VLQTELTEQRMKIEVQ-KKMEEELRKKEKQLEEEKQQMEQRLKEQLSNWHS 346
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 501 DTNLCTXITPGEFC-CPKGNKS*GPLSLSLFPGRCCLPVGN 620
D +CT G C C +G P S+S+ PGR C P+ N
Sbjct: 1241 DRAVCTDTDDGYMCRCRQGFLDISP-SISVKPGRLCKPLQN 1280
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 501 DTNLCTXITPGEFC-CPKGNKS*GPLSLSLFPGRCCLPVGN 620
D +CT G C C +G P S+S+ PGR C P+ N
Sbjct: 1825 DRAVCTDTDDGYMCRCRQGFLDISP-SISVKPGRLCKPLQN 1864
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 501 DTNLCTXITPGEFC-CPKGNKS*GPLSLSLFPGRCCLPVGN 620
D +CT G C C +G P S+S+ PGR C P+ N
Sbjct: 1241 DRAVCTDTDDGYMCRCRQGFLDISP-SISVKPGRLCKPLQN 1280
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 501 DTNLCTXITPGEFC-CPKGNKS*GPLSLSLFPGRCCLPVGN 620
D +CT G C C +G P S+S+ PGR C P+ N
Sbjct: 1825 DRAVCTDTDDGYMCRCRQGFLDISP-SISVKPGRLCKPLQN 1864
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 501 DTNLCTXITPGEFC-CPKGNKS*GPLSLSLFPGRCCLPVGN 620
D +CT G C C +G P S+S+ PGR C P+ N
Sbjct: 1825 DRAVCTDTDDGYMCRCRQGFLDISP-SISVKPGRLCKPLQN 1864
>Z82095-7|CAN86628.1| 390|Caenorhabditis elegans Hypothetical
protein ZK849.2c protein.
Length = 390
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +3
Query: 195 DAEMRKMEEEMSKFRSELMNEKATISSRAQLARRHL-HSIVTADSLPSQVTGIA*TRRSF 371
D +K+E ++++FRSEL +T+ ++AR+ S T +L ++V G +
Sbjct: 126 DMIKKKLETQLTQFRSELTQGLSTV-CELEIARKECDRSKRTIQALETEVFGARLAAKYL 184
Query: 372 KTRVTGKTLQASL 410
+ G+ Q L
Sbjct: 185 DKELAGRIQQIQL 197
>Z82095-6|CAI79281.2| 412|Caenorhabditis elegans Hypothetical
protein ZK849.2b protein.
Length = 412
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +3
Query: 195 DAEMRKMEEEMSKFRSELMNEKATISSRAQLARRHL-HSIVTADSLPSQVTGIA*TRRSF 371
D +K+E ++++FRSEL +T+ ++AR+ S T +L ++V G +
Sbjct: 148 DMIKKKLETQLTQFRSELTQGLSTV-CELEIARKECDRSKRTIQALETEVFGARLAAKYL 206
Query: 372 KTRVTGKTLQASL 410
+ G+ Q L
Sbjct: 207 DKELAGRIQQIQL 219
>Z82095-5|CAB05026.2| 414|Caenorhabditis elegans Hypothetical
protein ZK849.2a protein.
Length = 414
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +3
Query: 195 DAEMRKMEEEMSKFRSELMNEKATISSRAQLARRHL-HSIVTADSLPSQVTGIA*TRRSF 371
D +K+E ++++FRSEL +T+ ++AR+ S T +L ++V G +
Sbjct: 150 DMIKKKLETQLTQFRSELTQGLSTV-CELEIARKECDRSKRTIQALETEVFGARLAAKYL 208
Query: 372 KTRVTGKTLQASL 410
+ G+ Q L
Sbjct: 209 DKELAGRIQQIQL 221
>Z68751-6|CAA92976.1| 202|Caenorhabditis elegans Hypothetical
protein T05E11.8 protein.
Length = 202
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +3
Query: 120 KRNIPIKLGDFSVIDTEFSSIRERFDAEMRKMEEEMSKFRSELMNEKATISSRAQLAR 293
K+N + + S + T+ S+IRE D + E + R+E E TI A+ +R
Sbjct: 101 KKNTTTVINNLSSVATKLSAIRENKDQTRKAQHEAIEALRNENGVEVDTIEFIAKRSR 158
>Z75532-3|CAA99810.1| 660|Caenorhabditis elegans Hypothetical
protein C54G10.3 protein.
Length = 660
Score = 27.9 bits (59), Expect = 7.4
Identities = 25/84 (29%), Positives = 31/84 (36%), Gaps = 2/84 (2%)
Frame = +3
Query: 432 PKRSVVKTVDNKLLGPRQTRGESDTNLCTX-ITPGEFCCPKGNKS*GPLSL-SLFPGRCC 605
P V TVD+ L P L + I G+ G+ G SL +F G
Sbjct: 416 PDDGVAITVDSATLSPPNDHSHLIVQLLSLQIIQGQTLLITGDSGCGKSSLLRMFAGLWH 475
Query: 606 LPVGNALCHNSAITXQEHFLFQKP 677
G CH +T FL QKP
Sbjct: 476 CSSGKMDCHWRRLTSNLFFLAQKP 499
>AC024772-2|AAF60537.2| 756|Caenorhabditis elegans Osm-9 and
capsaicin receptor-relatedprotein 4 protein.
Length = 756
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 186 ERFDAEMRKMEEEMSKFRSEL 248
E F+ + +KM EE KFR EL
Sbjct: 701 EEFECQRKKMHEERRKFREEL 721
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = +3
Query: 513 CTXITPGEFCCPKGNKS*GPLSLSLFPGRCCLPVGNALC 629
C+ + CCP+ NK G + RC LP C
Sbjct: 510 CSVVQHSSVCCPENNKVVGLQTSGARATRCSLPKERGPC 548
>Z83221-6|CAB05703.3| 210|Caenorhabditis elegans Hypothetical
protein C49A1.10 protein.
Length = 210
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = -1
Query: 142 SLMGIFLLRPLSAIFHVICRVEIVETKQTLKRSRVNDFHWNNTHST 5
+L+ IF L + ++ +C E ++ + + VNDF +N H +
Sbjct: 141 ALLEIFFLYIVYRLYKHLCHYESIDNENRVNWQVVNDFPKDNKHGS 186
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,768,895
Number of Sequences: 27780
Number of extensions: 343797
Number of successful extensions: 1077
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1071
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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