Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30311
         (494 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY629351-1|AAV41218.1|  513|Homo sapiens DHHC domain-containing ...    83   5e-16
AK026677-1|BAB15524.1|  279|Homo sapiens protein ( Homo sapiens ...    83   5e-16
BC016914-1|AAH16914.1|  205|Homo sapiens ZCCHC4 protein protein.       32   1.3  
AY007239-1|AAG09636.1|  545|Homo sapiens monooxygenase X protein.      29   6.7  
AL357034-1|CAI15715.1|  545|Homo sapiens monooxygenase, DBH-like...    29   6.7  
AL023578-1|CAI19937.1|  545|Homo sapiens monooxygenase, DBH-like...    29   6.7  

>AY629351-1|AAV41218.1|  513|Homo sapiens DHHC domain-containing
           zinc finger protein protein.
          Length = 513

 Score = 83.0 bits (196), Expect = 5e-16
 Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
 Frame = +2

Query: 230 KITKKVL*ESRDGGICVVVDPPFGGRVEPLAKTLRELTDMYNKICEKDDTL--LPVLWAF 403
           ++ +  L E +  GI +V DPPFGG VEPLA T ++L  M+ +   +DD+   LP+ W F
Sbjct: 257 EVCRAFLQEDKGEGIIMVTDPPFGGLVEPLAITFKKLIAMWKEGQSQDDSHKELPIFWIF 316

Query: 404 PYFSEPYITNMLPEIKMHDYQVEYENH 484
           PYF E  I    P  +M DYQV+Y+NH
Sbjct: 317 PYFFESRICQFFPSFQMLDYQVDYDNH 343



 Score = 39.1 bits (87), Expect = 0.008
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
 Frame = +3

Query: 3   FTKKSAGTVLGILKNNSIRNILCIGTPTVHE------AAQTHPDFNSILLDYDKRYHVFH 164
           F  +S   ++ +L     R +LC+GTP +HE      +     +  S+LLD D RY  F+
Sbjct: 175 FADRSCQFLVDLLSALGFRRVLCVGTPRLHELIKLTASGDKKSNIKSLLLDIDFRYSQFY 234

Query: 165 PPDKY 179
             D +
Sbjct: 235 MEDSF 239


>AK026677-1|BAB15524.1|  279|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23024 fis, clone LNG01684. ).
          Length = 279

 Score = 83.0 bits (196), Expect = 5e-16
 Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
 Frame = +2

Query: 230 KITKKVL*ESRDGGICVVVDPPFGGRVEPLAKTLRELTDMYNKICEKDDTL--LPVLWAF 403
           ++ +  L E +  GI +V DPPFGG VEPLA T ++L  M+ +   +DD+   LP+ W F
Sbjct: 23  EVCRAFLQEDKGEGIIMVTDPPFGGLVEPLAITFKKLIAMWKEGQSQDDSHKELPIFWIF 82

Query: 404 PYFSEPYITNMLPEIKMHDYQVEYENH 484
           PYF E  I    P  +M DYQV+Y+NH
Sbjct: 83  PYFFESRICQFFPSFQMLDYQVDYDNH 109


>BC016914-1|AAH16914.1|  205|Homo sapiens ZCCHC4 protein protein.
          Length = 205

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
 Frame = +3

Query: 3   FTKKSAGTVLGILKNNSIRNILCIGTPTVHE------AAQTHPDFNSILLDYDKR 149
           F  +S   ++ +L     R +LC+GTP +HE      +     +  S+LLD D R
Sbjct: 151 FADRSCQFLVDLLSALGFRRVLCVGTPRLHELIKLTASGDKKSNIKSLLLDIDFR 205


>AY007239-1|AAG09636.1|  545|Homo sapiens monooxygenase X protein.
          Length = 545

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = +2

Query: 395 WAFPYFSEPYITNMLPEIK---MHDYQVEY 475
           ++FPYF + Y TN   E+K     DY +EY
Sbjct: 13  FSFPYFPQDYFTNANRELKKDAQQDYHLEY 42


>AL357034-1|CAI15715.1|  545|Homo sapiens monooxygenase, DBH-like 1
           protein.
          Length = 545

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = +2

Query: 395 WAFPYFSEPYITNMLPEIK---MHDYQVEY 475
           ++FPYF + Y TN   E+K     DY +EY
Sbjct: 13  FSFPYFPQDYFTNANRELKKDAQQDYHLEY 42


>AL023578-1|CAI19937.1|  545|Homo sapiens monooxygenase, DBH-like 1
           protein.
          Length = 545

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = +2

Query: 395 WAFPYFSEPYITNMLPEIK---MHDYQVEY 475
           ++FPYF + Y TN   E+K     DY +EY
Sbjct: 13  FSFPYFPQDYFTNANRELKKDAQQDYHLEY 42


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,356,754
Number of Sequences: 237096
Number of extensions: 1427211
Number of successful extensions: 10531
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10529
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4479766258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)