Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30311
         (494 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81525-3|CAB04258.1|  467|Caenorhabditis elegans Hypothetical pr...    51   4e-07
AF067623-5|AAC17555.3| 1043|Caenorhabditis elegans Guanylyl cycl...    30   1.1  
AB201390-1|BAE78830.1| 1073|Caenorhabditis elegans recepotor typ...    30   1.1  
AF045646-5|AAK29828.1|  225|Caenorhabditis elegans Hypothetical ...    29   1.9  
Z82057-3|CAB04860.2|  303|Caenorhabditis elegans Hypothetical pr...    28   4.3  
Z68316-2|CAA92681.1|  352|Caenorhabditis elegans Hypothetical pr...    27   9.9  
U41558-1|AAK39248.1|  333|Caenorhabditis elegans Hypothetical pr...    27   9.9  

>Z81525-3|CAB04258.1|  467|Caenorhabditis elegans Hypothetical
           protein F33A8.4 protein.
          Length = 467

 Score = 51.2 bits (117), Expect = 4e-07
 Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 6/135 (4%)
 Frame = +3

Query: 3   FTKKSAGTVLGILKNNSIRNILCIGTPTVHEAAQT-HPDFNSILLDYDKRYHVFHPPDKY 179
           F+ ++   +   ++ + +  ILCIG P + E  +  HP+ N  LLDYDKR+  F P  +Y
Sbjct: 216 FSTETLDVITKAVEKSKVDGILCIGAPRIFENIRALHPEKNVFLLDYDKRFAKFFPSKQY 275

Query: 180 IWXXXXXXXXXXXXXXEKLLKKFFKSQEMVV-----FVL*WTLLLEAVWNHSQRH*GSSQ 344
                            KL++ F KS+ +++     F +    LL+++    +R   + +
Sbjct: 276 AQYSMLVDHFFDKIAEPKLMEFFDKSKSILMITDPPFGVFMEPLLKSIEKMKKRFVSTGK 335

Query: 345 ICTIKYVRKTIPCYL 389
             T+ Y    +P Y+
Sbjct: 336 EETLFYSMIVLPIYI 350



 Score = 44.4 bits (100), Expect = 5e-05
 Identities = 23/74 (31%), Positives = 39/74 (52%)
 Frame = +2

Query: 272 ICVVVDPPFGGRVEPLAKTLRELTDMYNKICEKDDTLLPVLWAFPYFSEPYITNMLPEIK 451
           I ++ DPPFG  +EPL K++ ++   +     K++TL   +   P +   Y+ +      
Sbjct: 304 ILMITDPPFGVFMEPLLKSIEKMKKRFVST-GKEETLFYSMIVLPIYIRKYVLH--GNFW 360

Query: 452 MHDYQVEYENHKKF 493
           M DY+V YE HK +
Sbjct: 361 MSDYRVTYEGHKLY 374


>AF067623-5|AAC17555.3| 1043|Caenorhabditis elegans Guanylyl cyclase
           protein 23 protein.
          Length = 1043

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +3

Query: 81  PTVHEAAQTHPDFNSILLD 137
           PTVH+  Q HPD  ++LLD
Sbjct: 737 PTVHDRTQIHPDLVALLLD 755


>AB201390-1|BAE78830.1| 1073|Caenorhabditis elegans recepotor type
           guanyly cyclase protein.
          Length = 1073

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +3

Query: 81  PTVHEAAQTHPDFNSILLD 137
           PTVH+  Q HPD  ++LLD
Sbjct: 767 PTVHDRTQIHPDLVALLLD 785


>AF045646-5|AAK29828.1|  225|Caenorhabditis elegans Hypothetical
           protein F56B3.3 protein.
          Length = 225

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 306 RPPKGGSTTTQIPPSLDS*RTFLVIFHHH*H 214
           RPP   ++++  P S      FL IFHHH H
Sbjct: 50  RPPSLSASSSPAPGSARKPYFFLYIFHHHQH 80


>Z82057-3|CAB04860.2|  303|Caenorhabditis elegans Hypothetical
           protein T26H8.2 protein.
          Length = 303

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = -1

Query: 176 FIRGVEHMVSLVVVQEYRVKVWVGLCCLMNSWSSNA*DISYAIVF 42
           F++   ++V  +++  Y V  +  LC  +N + S    ISY  +F
Sbjct: 74  FLKSYSYIVGHILIITYEVSTYSHLCISLNRFCSIVAPISYESIF 118


>Z68316-2|CAA92681.1|  352|Caenorhabditis elegans Hypothetical
           protein K08E4.3 protein.
          Length = 352

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 11/27 (40%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
 Frame = +1

Query: 253 RVKRWWY--LCCSGPSFWRPCGTTRKD 327
           R   WW    C   PSF +PC T   D
Sbjct: 227 RCSSWWLSGFCSPDPSFGKPCSTILGD 253


>U41558-1|AAK39248.1|  333|Caenorhabditis elegans Hypothetical
           protein K02B2.3 protein.
          Length = 333

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 281 VVDPPFGGRVEPLAKTLRELTDMYNKICE 367
           ++D P   R EP   T+R L+D    +CE
Sbjct: 61  LLDVPLPSRNEPCQFTMRPLSDTIGSLCE 89


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,384,452
Number of Sequences: 27780
Number of extensions: 221011
Number of successful extensions: 515
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)