Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30310
         (725 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8ID83 Cluster: MAL13P1.310 protein; n=1; Plasmodium fa...    33   7.2  
UniRef50_Q5AGZ5 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  

>UniRef50_Q8ID83 Cluster: MAL13P1.310 protein; n=1; Plasmodium
           falciparum 3D7|Rep: MAL13P1.310 protein - Plasmodium
           falciparum (isolate 3D7)
          Length = 2030

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 18/72 (25%), Positives = 32/72 (44%)
 Frame = +3

Query: 309 YYYDRFANRLVLAQWTHA*SQRKKLSLICSRCNSMTVNRYAHKYISTNKAIEQLINNNFT 488
           YYY+     +   ++    S+   L  +   CN +   +Y  K     K  ++L+ N+FT
Sbjct: 151 YYYNEVYTNIEPNKYDICKSRSMDLENVKINCNLIEDKKYKIKNYENKKRNDKLLKNSFT 210

Query: 489 NVL*QISKLYTN 524
           N++  IS    N
Sbjct: 211 NIIHTISNTLLN 222


>UniRef50_Q5AGZ5 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 161

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
 Frame = +3

Query: 393 CSRCNSMTV---NRYAHKYISTNKAIEQLINNNFTNVL*QIS--KLYTNSEVNVFTLS 551
           C   N +TV    + +HKY   N ++E  +N+NF+N L  ++  + + N  V + TLS
Sbjct: 51  CDISNFLTVLFVAKNSHKYFHPNSSMETFLNDNFSNCLLYVNDPRKFFNISVVIVTLS 108


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 586,561,696
Number of Sequences: 1657284
Number of extensions: 10171774
Number of successful extensions: 17190
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17188
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)