Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30310
         (725 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF174120-1|AAD53866.1|  124|Homo sapiens immunoglobulin heavy ch...    34   0.45 

>AF174120-1|AAD53866.1|  124|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 124

 Score = 34.3 bits (75), Expect = 0.45
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = +3

Query: 261 YCARWYPHYTALVD*LYYY 317
           YCARW P+Y  L+D +YYY
Sbjct: 95  YCARWGPYYGDLLDEIYYY 113


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,113,217
Number of Sequences: 237096
Number of extensions: 1577156
Number of successful extensions: 1945
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1945
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)