Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30309
(815 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) 123 2e-28
SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) 98 7e-21
SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) 96 3e-20
SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 3e-17
SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 1e-11
SB_32481| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_10621| Best HMM Match : Peptidase_M24 (HMM E-Value=4.3e-14) 29 4.5
SB_3265| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_5537| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_30638| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 28 7.9
>SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 123 bits (297), Expect = 2e-28
Identities = 73/146 (50%), Positives = 92/146 (63%), Gaps = 5/146 (3%)
Frame = +1
Query: 256 IEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGD 435
IEQK EGSERK+Q + YR +E EL E+C VL LL+ LIP A + ESKVFYLKMKGD
Sbjct: 44 IEQKLEGSERKKQNTETYRQTIENELNEVCETVLKLLESKLIPNAQSTESKVFYLKMKGD 103
Query: 436 YYRYLAEVATGETRHSVVEDSQKASKMLLKSARR--KCSPHTP*GWVWR*ISQSF-IMRY 606
YYRY EVA + R VV+ + KA + A + K P P + ++ +F + Y
Sbjct: 104 YYRYEGEVAGADRRREVVQKAMKAYSEAQEIAEKDPKLPPTDP---IRLGLALNFSVFYY 160
Query: 607 *IRQ--TRACQLAKQAFDDAIAELDT 678
I + +AC LAK+AFDDAIAELDT
Sbjct: 161 EIVEDSKQACDLAKKAFDDAIAELDT 186
Score = 70.9 bits (166), Expect = 1e-12
Identities = 35/70 (50%), Positives = 43/70 (61%)
Frame = +3
Query: 510 QDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKGVSTRQTGFRRCHRRTGHLNED 689
++A E K+ PT PIRLGLALNFSVF+YEI + ++ + F LNED
Sbjct: 220 KEAAETGDGKLAPTDPIRLGLALNFSVFHYEIQENQEEACKLAKQAFDDAIAELDSLNED 279
Query: 690 SYKDSTLIMQ 719
YKDSTLIMQ
Sbjct: 280 QYKDSTLIMQ 289
Score = 67.3 bits (157), Expect = 1e-11
Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Frame = +3
Query: 501 ESIQDAFEISKA--KMQPTHPIRLGLALNFSVFYYEILNSPDKGVSTRQTGFRRCHRRTG 674
++ +A EI++ K+ PT PIRLGLALNFSVFYYEI+ + + F
Sbjct: 126 KAYSEAQEIAEKDPKLPPTDPIRLGLALNFSVFYYEIVEDSKQACDLAKKAFDDAIAELD 185
Query: 675 HLNEDSYKDSTLIMQ 719
L+ED YKDSTLIMQ
Sbjct: 186 TLSEDQYKDSTLIMQ 200
Score = 64.5 bits (150), Expect = 1e-10
Identities = 32/47 (68%), Positives = 35/47 (74%)
Frame = +2
Query: 128 MAAAMKEVTETGVEXSNXERNLLSVAYKNVVGARRSSWRVIS*LNRK 268
MA AMKE TE ERNLLSVAYKNVVGA+RSSWRVIS + +K
Sbjct: 1 MAKAMKEATEISETLEQEERNLLSVAYKNVVGAKRSSWRVISSIEQK 47
Score = 47.6 bits (108), Expect = 1e-05
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +1
Query: 616 QTRACQLAKQAFDDAIAELDT*TKIRTKILR**CSCCEINLTLWTSDTSGD-GDE 777
Q AC+LAKQAFDDAIAELD+ + + K NLTLW+S+ D GD+
Sbjct: 255 QEEACKLAKQAFDDAIAELDSLNEDQYKDSTLIMQLLRDNLTLWSSENQEDQGDD 309
>SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0)
Length = 248
Score = 98.3 bits (234), Expect = 7e-21
Identities = 66/177 (37%), Positives = 90/177 (50%), Gaps = 3/177 (1%)
Frame = +1
Query: 256 IEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKAS---NPESKVFYLKM 426
+EQK E + K+YR + EL C +VL +L+ +L+ N E+KVFYLKM
Sbjct: 73 MEQKAP--EEMAALTKKYREDITNELNGKCAEVLDILENYLLKDGQDDINTEAKVFYLKM 130
Query: 427 KGDYYRYLAEVATGETRHSVVEDSQKASKMLLKSARRKCSPHTP*GWVWR*ISQSFIMRY 606
+GDY+RYL EVA G++R +E S++A K A + SP P F
Sbjct: 131 RGDYHRYLVEVAEGDSRKENIEKSREAYKDASAKA-EELSPSHPIRLGLALNFSVFYYEI 189
Query: 607 *IRQTRACQLAKQAFDDAIAELDT*TKIRTKILR**CSCCEINLTLWTSDTSGDGDE 777
+ AC+LAK+AFDDAIA LD K NLTLWTS+ +G +
Sbjct: 190 ENKPPEACKLAKEAFDDAIAVLDNLKDESYKDSTLIMQLLRDNLTLWTSEQDQEGQD 246
Score = 94.3 bits (224), Expect = 1e-19
Identities = 46/74 (62%), Positives = 55/74 (74%)
Frame = +2
Query: 47 PSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVEXSNXERNLLSVAYKNVVGA 226
P+ +EEL+ AK+AEQAERYDDM AM VT+ G ++ ERNLLSVAYKNVVGA
Sbjct: 3 PNFVSKCSREELIHLAKMAEQAERYDDMVNAMSAVTKEGKPLNDEERNLLSVAYKNVVGA 62
Query: 227 RRSSWRVIS*LNRK 268
RRSSWRVIS + +K
Sbjct: 63 RRSSWRVISSMEQK 76
Score = 72.1 bits (169), Expect = 5e-13
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Frame = +3
Query: 501 ESIQDAFEISKAK---MQPTHPIRLGLALNFSVFYYEILNSPDKGVSTRQTGFRRCHRRT 671
E ++A++ + AK + P+HPIRLGLALNFSVFYYEI N P + + F
Sbjct: 152 EKSREAYKDASAKAEELSPSHPIRLGLALNFSVFYYEIENKPPEACKLAKEAFDDAIAVL 211
Query: 672 GHLNEDSYKDSTLIMQ 719
+L ++SYKDSTLIMQ
Sbjct: 212 DNLKDESYKDSTLIMQ 227
>SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44)
Length = 251
Score = 96.3 bits (229), Expect = 3e-20
Identities = 46/74 (62%), Positives = 57/74 (77%)
Frame = +2
Query: 68 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVEXSNXERNLLSVAYKNVVGARRSSWRV 247
DKEE V AKLAEQAERYDDM +MKEV + G E S +RNLLSVAYKNV+GARR+SWR+
Sbjct: 3 DKEEHVYMAKLAEQAERYDDMVNSMKEVAKMGTELSTEDRNLLSVAYKNVIGARRASWRI 62
Query: 248 IS*LNRKPRVQKEN 289
I+ + +K + E+
Sbjct: 63 ITSIEQKEESKGED 76
Score = 51.6 bits (118), Expect = 7e-07
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Frame = +1
Query: 256 IEQKTEGSER---KQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKM 426
IEQK E K +M + YR +E+EL+ IC ++L LLD LI + + ESKVFY K+
Sbjct: 66 IEQKEESKGEDMAKLEMIRNYRKTIEEELKTICGEILSLLDDSLIKNSQSEESKVFYNKI 125
>SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 86.2 bits (204), Expect = 3e-17
Identities = 42/70 (60%), Positives = 52/70 (74%)
Frame = +2
Query: 59 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVEXSNXERNLLSVAYKNVVGARRSS 238
M V +E L+ AKL+EQ +RYD+MA MKEV+E + S ERNLLSV+YKN+VG RRSS
Sbjct: 80 MMVVRETLIYNAKLSEQCDRYDEMAKIMKEVSEKYPKLSKEERNLLSVSYKNIVGQRRSS 139
Query: 239 WRVIS*LNRK 268
WRVIS + K
Sbjct: 140 WRVISSIEEK 149
Score = 78.6 bits (185), Expect = 6e-15
Identities = 37/72 (51%), Positives = 54/72 (75%)
Frame = +1
Query: 256 IEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGD 435
IE+KT S + K+Y+ +EKEL+++C +VLG+L++ LIP A + E+KVFY K+KGD
Sbjct: 146 IEEKTAESS-SLAIVKKYKACIEKELKDLCKEVLGILER-LIPGAEDEENKVFYFKLKGD 203
Query: 436 YYRYLAEVATGE 471
YYRYLAE + G+
Sbjct: 204 YYRYLAEFSHGQ 215
>SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 67.7 bits (158), Expect = 1e-11
Identities = 32/62 (51%), Positives = 41/62 (66%)
Frame = +2
Query: 59 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVEXSNXERNLLSVAYKNVVGARRSS 238
M + ELVQ AKLAEQ ER++D+ MK+ E + RNLLSV YKNVVG++R +
Sbjct: 186 MQDSRNELVQLAKLAEQTERFEDVILYMKKAIEINPSLNKEHRNLLSVGYKNVVGSKRFA 245
Query: 239 WR 244
WR
Sbjct: 246 WR 247
>SB_32481| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 499
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +3
Query: 486 CRGFTESIQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNS 614
C+G TE++Q+AFE S+ T P ++G A ++ Y+ NS
Sbjct: 212 CKGKTENLQNAFEGSE-----TDPAKIGFAFYIGLWAYDGWNS 249
>SB_10621| Best HMM Match : Peptidase_M24 (HMM E-Value=4.3e-14)
Length = 708
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 116 RYDDMAAAMKEVTETGVEXSNXERNLLSV 202
+YD++ AA+K+ T TG+ S + L V
Sbjct: 57 KYDNLLAAVKDATNTGIRESGIDARLCDV 85
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 116 RYDDMAAAMKEVTETGVEXSNXERNLLSV 202
+YD++ AA+K+ T TG+ S + L V
Sbjct: 163 KYDNLLAAVKDATNTGIRESGIDARLCDV 191
>SB_3265| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 468 RNQTFCCRGFTESIQDAFEISKAKMQPTHPIR 563
+N+T CC G T S ++ F + K K P R
Sbjct: 10 KNKTICCPGRTFSYKEVFSMGKRKSASLSPQR 41
>SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 994
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 35 ISPLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVEXSNXER 187
+SPLPS+ +E+V KLAE+ E ++++ T+ E + E+
Sbjct: 643 VSPLPSTATEDQMQEVVDSNKLAEKKEVTEEVSPVKPLSTKESKENALEEK 693
>SB_5537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 496
Score = 28.7 bits (61), Expect = 6.0
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +1
Query: 334 REICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGET-RHSVVEDSQKAS 510
R + L +HL+P+A + S+ F + R+L A T RH V S S
Sbjct: 393 RHLVPRALDSTSRHLVPRALDSTSRHFVPQALDSTSRHLVPRALDSTSRHLVPRASDSTS 452
Query: 511 KMLLKSARRKCSPH 552
+ L+ A S H
Sbjct: 453 RHLVPQALDSTSRH 466
>SB_30638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 196 FSCL*ECRRCPTVIMACHFLIEQKTEGSERKQQMA--KEYRVKVEKE 330
FSC EC R + + +F IE+ ++G + + KE + K+EK+
Sbjct: 46 FSCTRECSRAEGLCASVNFYIEKGSDGKHLCELLTDDKEQQGKLEKD 92
>SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)
Length = 783
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +1
Query: 286 KQQMAKEYRVKVEKELREICYDVLGLLDKHLIPK 387
K++M ++Y K+EKE+ Y+++ L K ++ K
Sbjct: 292 KEEMKEKYDGKIEKEMSGAIYEIISRLMKAVVGK 325
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,066,802
Number of Sequences: 59808
Number of extensions: 506465
Number of successful extensions: 1408
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1403
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2275631710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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