Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30309
         (815 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    26   1.6  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    26   1.6  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   2.8  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   4.9  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   6.4  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   6.4  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   8.5  
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    23   8.5  

>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
 Frame = +1

Query: 127 HGGRDEGSDGNRRRX*QXREEPPFSCL*ECRRC---PTVIMACHFLIEQ 264
           HGG D   D  +       EE PF C   CR     P V    H+  E+
Sbjct: 222 HGGDDSDGDDTKYEIHSDDEELPFKCY-VCRESFVDPIVTKCKHYFCER 269


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
 Frame = +1

Query: 127 HGGRDEGSDGNRRRX*QXREEPPFSCL*ECRRC---PTVIMACHFLIEQ 264
           HGG D   D  +       EE PF C   CR     P V    H+  E+
Sbjct: 222 HGGDDSDGDDTKYEIHSDDEELPFKCY-VCRESFVDPIVTKCKHYFCER 269


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 636 ELTRPCLANLISHNKRLRNLTPDPALWGVWA 544
           E+T   LAN  + N+  R  T +  ++GVWA
Sbjct: 10  EITDYDLANEFNPNRGRRRPTKNQQIYGVWA 40


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 719 VAARLT*RFGRQTLQAMATSLPEGRRQ 799
           V ARLT R    T  A A + PEGRR+
Sbjct: 468 VRARLTRRTIPPTRVAAAAAAPEGRRR 494


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +1

Query: 220  RCPTVIMAC-HFLIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDK 372
            R P    +C   L    +E + R QQ+  E+R++ E   RE+    L LL K
Sbjct: 1379 RPPVATFSCPDGLAHALSEQNLRLQQIVYEHRLREEALQRELYATRLALLKK 1430


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +1

Query: 220  RCPTVIMAC-HFLIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDK 372
            R P    +C   L    +E + R QQ+  E+R++ E   RE+    L LL K
Sbjct: 1376 RPPVATFSCPDGLAHALSEQNLRLQQIVYEHRLREEALQRELYATRLALLKK 1427


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 253 LIEQKTEGSERKQQMAKEYRVKVEKELRE 339
           L EQ+      K+Q  KE R K E+E ++
Sbjct: 474 LREQREREQREKEQREKEQREKEERERQQ 502


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 51  RPRCPSTRKNWCNVP 95
           RPR PS R N  N+P
Sbjct: 126 RPRTPSMRVNCTNIP 140


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 825,281
Number of Sequences: 2352
Number of extensions: 15792
Number of successful extensions: 37
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)