Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30306
(334 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY819656-1|AAV70656.1| 56|Tribolium castaneum elongation facto... 39 2e-05
AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxida... 25 0.28
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 1.1
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 1.1
AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory recept... 22 1.5
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 20 5.9
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 20 5.9
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 20 7.8
AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory recept... 20 7.8
AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory recept... 20 7.8
AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esteras... 20 7.8
AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esteras... 20 7.8
AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esteras... 20 7.8
AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esteras... 20 7.8
AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esteras... 20 7.8
>AY819656-1|AAV70656.1| 56|Tribolium castaneum elongation factor
1-alpha protein.
Length = 56
Score = 38.7 bits (86), Expect = 2e-05
Identities = 24/58 (41%), Positives = 31/58 (53%)
Frame = +3
Query: 72 VESVHSIPGRGTVITGRLYRGVLKKGTDCEIVGHGKTMKTTVTGVEMFHKTLEEAQAG 245
++ V+ I G GTV GR+ GVLK G +V + T V VEM H+ L EA G
Sbjct: 1 LQDVYKIGGIGTVPVGRVETGVLKPG--MVVVFAPANITTEVKSVEMHHEALPEAVPG 56
>AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxidase
subunit 1 protein.
Length = 682
Score = 24.6 bits (51), Expect = 0.28
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 203 SGYGCFHCFTMTNNFTISTLLQDTS 129
+GY C H F M +N+ + QDTS
Sbjct: 593 AGYPC-HLFVMISNYADDRVEQDTS 616
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.6 bits (46), Expect = 1.1
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -1
Query: 211 ISTPVTVVFIVLP*PTISQSVPFFKTPLYKRPV 113
+ T +TV F+VL +S+ F T K+ V
Sbjct: 62 VVTIITVFFVVLGAAVVSKGTTLFMTSQIKKNV 94
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.6 bits (46), Expect = 1.1
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -1
Query: 211 ISTPVTVVFIVLP*PTISQSVPFFKTPLYKRPV 113
+ T +TV F+VL +S+ F T K+ V
Sbjct: 62 VVTIITVFFVVLGAAVVSKGTTLFMTSQIKKNV 94
>AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory receptor
candidate 15 protein.
Length = 455
Score = 22.2 bits (45), Expect = 1.5
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +1
Query: 70 QLSLFTQFLDEELSLQAVYT 129
+L+ TQFLD+ELS +++
Sbjct: 345 RLARLTQFLDKELSYLILFS 364
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 20.2 bits (40), Expect = 5.9
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = +1
Query: 7 LKKWTHSFQHLSESSK 54
L++W HS H+ E +
Sbjct: 215 LEQWNHSKVHIREDKR 230
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 20.2 bits (40), Expect = 5.9
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -1
Query: 121 RPVMTVPRPG 92
+PV T P+PG
Sbjct: 425 KPVQTTPKPG 434
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 19.8 bits (39), Expect = 7.8
Identities = 4/11 (36%), Positives = 10/11 (90%)
Frame = -2
Query: 306 MTIPRLICPLL 274
+T+P ++CP++
Sbjct: 284 VTVPMIVCPIV 294
>AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory receptor
candidate 36 protein.
Length = 355
Score = 19.8 bits (39), Expect = 7.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 206 NSGYGCFHCFTMTNNFTISTLL 141
+S Y C + NFTIS +L
Sbjct: 241 SSLYTCIAGYEFNANFTISYIL 262
>AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory receptor
candidate 11 protein.
Length = 344
Score = 19.8 bits (39), Expect = 7.8
Identities = 4/11 (36%), Positives = 10/11 (90%)
Frame = -2
Query: 306 MTIPRLICPLL 274
+T+P ++CP++
Sbjct: 284 VTVPMIVCPIV 294
>AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 19.8 bits (39), Expect = 7.8
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +2
Query: 80 CSLNSWTRNCHY 115
C+LN W R+ Y
Sbjct: 220 CALNLWARSRRY 231
>AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 19.8 bits (39), Expect = 7.8
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +2
Query: 80 CSLNSWTRNCHY 115
C+LN W R+ Y
Sbjct: 220 CALNLWARSRRY 231
>AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 19.8 bits (39), Expect = 7.8
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +2
Query: 80 CSLNSWTRNCHY 115
C+LN W R+ Y
Sbjct: 220 CALNLWARSRRY 231
>AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esterase
protein.
Length = 510
Score = 19.8 bits (39), Expect = 7.8
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +2
Query: 80 CSLNSWTRNCHY 115
C+LN W R+ Y
Sbjct: 220 CALNLWARSRRY 231
>AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esterase
protein.
Length = 509
Score = 19.8 bits (39), Expect = 7.8
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +2
Query: 80 CSLNSWTRNCHY 115
C+LN W R+ Y
Sbjct: 219 CALNLWARSRRY 230
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,848
Number of Sequences: 336
Number of extensions: 1508
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used: 6473381
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
- SilkBase 1999-2023 -