Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30302
(658 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 138 2e-34
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 138 2e-34
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 138 2e-34
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 138 2e-34
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 24 4.9
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 138 bits (333), Expect = 2e-34
Identities = 75/121 (61%), Positives = 82/121 (67%), Gaps = 2/121 (1%)
Frame = +2
Query: 257 HYTEGSELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 436
HYTEG+ELVD+VLDVVRKE E+CDCLQGFQ KIREEYPDRIM
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 437 NTYSVVPSPKVSDTVVEPYNATLSFIN*LKTQTKPT--VSTTRLSTISAFRTLKLSTPTY 610
NTYSVVPSPKVSDTVVEPYNATLS I+ L T T + L I FRTLK+ P+Y
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLS-IHQLVENTDETYCIDNEALYDI-CFRTLKVPNPSY 118
Query: 611 G 613
G
Sbjct: 119 G 119
Score = 76.6 bits (180), Expect = 7e-16
Identities = 38/50 (76%), Positives = 39/50 (78%)
Frame = +1
Query: 508 IHQLVENTDETYCIDNEALYDICFPHAKTIHTHIRATLNHLVSLTMSGVT 657
IHQLVENTDETYCIDNEALYDICF K + LNHLVSLTMSGVT
Sbjct: 85 IHQLVENTDETYCIDNEALYDICFRTLKVPNPSY-GDLNHLVSLTMSGVT 133
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 138 bits (333), Expect = 2e-34
Identities = 75/121 (61%), Positives = 82/121 (67%), Gaps = 2/121 (1%)
Frame = +2
Query: 257 HYTEGSELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 436
HYTEG+ELVD+VLDVVRKE E+CDCLQGFQ KIREEYPDRIM
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 437 NTYSVVPSPKVSDTVVEPYNATLSFIN*LKTQTKPT--VSTTRLSTISAFRTLKLSTPTY 610
NTYSVVPSPKVSDTVVEPYNATLS I+ L T T + L I FRTLK+ P+Y
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLS-IHQLVENTDETYCIDNEALYDI-CFRTLKVPNPSY 118
Query: 611 G 613
G
Sbjct: 119 G 119
Score = 76.6 bits (180), Expect = 7e-16
Identities = 38/50 (76%), Positives = 39/50 (78%)
Frame = +1
Query: 508 IHQLVENTDETYCIDNEALYDICFPHAKTIHTHIRATLNHLVSLTMSGVT 657
IHQLVENTDETYCIDNEALYDICF K + LNHLVSLTMSGVT
Sbjct: 85 IHQLVENTDETYCIDNEALYDICFRTLKVPNPSY-GDLNHLVSLTMSGVT 133
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 138 bits (333), Expect = 2e-34
Identities = 75/121 (61%), Positives = 82/121 (67%), Gaps = 2/121 (1%)
Frame = +2
Query: 257 HYTEGSELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 436
HYTEG+ELVD+VLDVVRKE E+CDCLQGFQ KIREEYPDRIM
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 437 NTYSVVPSPKVSDTVVEPYNATLSFIN*LKTQTKPT--VSTTRLSTISAFRTLKLSTPTY 610
NTYSVVPSPKVSDTVVEPYNATLS I+ L T T + L I FRTLK+ P+Y
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLS-IHQLVENTDETYCIDNEALYDI-CFRTLKVPNPSY 118
Query: 611 G 613
G
Sbjct: 119 G 119
Score = 76.6 bits (180), Expect = 7e-16
Identities = 38/50 (76%), Positives = 39/50 (78%)
Frame = +1
Query: 508 IHQLVENTDETYCIDNEALYDICFPHAKTIHTHIRATLNHLVSLTMSGVT 657
IHQLVENTDETYCIDNEALYDICF K + LNHLVSLTMSGVT
Sbjct: 85 IHQLVENTDETYCIDNEALYDICFRTLKVPNPSY-GDLNHLVSLTMSGVT 133
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 138 bits (333), Expect = 2e-34
Identities = 75/121 (61%), Positives = 82/121 (67%), Gaps = 2/121 (1%)
Frame = +2
Query: 257 HYTEGSELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 436
HYTEG+ELVD+VLDVVRKE E+CDCLQGFQ KIREEYPDRIM
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 437 NTYSVVPSPKVSDTVVEPYNATLSFIN*LKTQTKPT--VSTTRLSTISAFRTLKLSTPTY 610
NTYSVVPSPKVSDTVVEPYNATLS I+ L T T + L I FRTLK+ P+Y
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLS-IHQLVENTDETYCIDNEALYDI-CFRTLKVPNPSY 118
Query: 611 G 613
G
Sbjct: 119 G 119
Score = 76.6 bits (180), Expect = 7e-16
Identities = 38/50 (76%), Positives = 39/50 (78%)
Frame = +1
Query: 508 IHQLVENTDETYCIDNEALYDICFPHAKTIHTHIRATLNHLVSLTMSGVT 657
IHQLVENTDETYCIDNEALYDICF K + LNHLVSLTMSGVT
Sbjct: 85 IHQLVENTDETYCIDNEALYDICFRTLKVPNPSY-GDLNHLVSLTMSGVT 133
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
promoter protein.
Length = 1197
Score = 23.8 bits (49), Expect = 4.9
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Frame = -1
Query: 214 KLSGRKICPKGPERTESMVPG-----SKSTRMARGTYLSAGGFI 98
+LS K PKG E MVP S+ + RG L +G +
Sbjct: 1036 RLSHSKSWPKGTENENYMVPPSPRPVSEELHLVRGVRLGSGTLV 1079
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 687,459
Number of Sequences: 2352
Number of extensions: 14492
Number of successful extensions: 41
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -