Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30302
(658 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 186 1e-47
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 185 2e-47
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 185 2e-47
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 182 2e-46
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 181 3e-46
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 178 2e-45
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 177 4e-45
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 177 7e-45
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 176 1e-44
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 70 1e-12
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 70 1e-12
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 70 1e-12
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 70 2e-12
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 70 2e-12
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 68 6e-12
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 68 6e-12
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 54 1e-07
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 53 1e-07
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 31 0.51
At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding ... 29 2.1
At4g22070.1 68417.m03192 WRKY family transcription factor identi... 29 2.7
At2g40940.1 68415.m05055 ethylene response sensor / ethylene-res... 29 3.6
At1g76440.2 68414.m08888 expressed protein 29 3.6
At1g76440.1 68414.m08887 expressed protein 29 3.6
At1g17450.1 68414.m02137 ATP phosphoribosyltransferase -related ... 28 4.8
At3g50660.1 68416.m05541 steroid 22-alpha-hydroxylase (CYP90B1) ... 27 8.3
At2g47830.2 68415.m05970 cation efflux family protein / metal to... 27 8.3
At2g47830.1 68415.m05969 cation efflux family protein / metal to... 27 8.3
At2g28880.1 68415.m03510 para-aminobenzoate (PABA) synthase fami... 27 8.3
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 186 bits (453), Expect = 1e-47
Identities = 108/211 (51%), Positives = 125/211 (59%), Gaps = 7/211 (3%)
Frame = +2
Query: 2 FWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGQVRAPR------HPRRLGARH 160
FWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+ PR P + +
Sbjct: 20 FWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY-VPRAVLMDLEPGTMDSIR 78
Query: 161 HGLCPLWTFRTDLPSXXXXXXXXXXXXXXXXXHYTEGSELVDSVLDVVRKEAESCDCLQG 340
G FR D HYTEG+EL+D+VLDVVRKEAE+CDCLQG
Sbjct: 79 SGPYGQ-IFRPD----NFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQG 133
Query: 341 FQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSFIN* 520
FQ KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLS
Sbjct: 134 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 193
Query: 521 LKTQTKPTVSTTRLSTISAFRTLKLSTPTYG 613
++ + V FRTLKLSTP++G
Sbjct: 194 VENADECMVLDNEALYDICFRTLKLSTPSFG 224
Score = 99.5 bits (237), Expect = 2e-21
Identities = 41/46 (89%), Positives = 46/46 (100%)
Frame = +3
Query: 117 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAK 254
+YVPRA+L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAK
Sbjct: 59 RYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAK 104
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/50 (62%), Positives = 35/50 (70%)
Frame = +1
Query: 508 IHQLVENTDETYCIDNEALYDICFPHAKTIHTHIRATLNHLVSLTMSGVT 657
+HQLVEN DE +DNEALYDICF K + T LNHL+S TMSGVT
Sbjct: 190 VHQLVENADECMVLDNEALYDICFRTLK-LSTPSFGDLNHLISATMSGVT 238
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 185 bits (451), Expect = 2e-47
Identities = 107/210 (50%), Positives = 123/210 (58%), Gaps = 6/210 (2%)
Frame = +2
Query: 2 FWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRAPR------HPRRLGARHH 163
FWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G+ PR P + +
Sbjct: 20 FWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRF-VPRAVLMDLEPGTMDSLRS 78
Query: 164 GLCPLWTFRTDLPSXXXXXXXXXXXXXXXXXHYTEGSELVDSVLDVVRKEAESCDCLQGF 343
G TFR D HYTEG+EL+DSVLDVVRKEAE+CDCLQGF
Sbjct: 79 GPYGQ-TFRPD----NFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF 133
Query: 344 QXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSFIN*L 523
Q KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLS +
Sbjct: 134 QVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLV 193
Query: 524 KTQTKPTVSTTRLSTISAFRTLKLSTPTYG 613
+ + V FRTLKL+TP++G
Sbjct: 194 ENADECMVLDNEALYDICFRTLKLTTPSFG 223
Score = 95.1 bits (226), Expect = 4e-20
Identities = 39/46 (84%), Positives = 45/46 (97%)
Frame = +3
Query: 117 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAK 254
++VPRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAK
Sbjct: 58 RFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAK 103
Score = 62.5 bits (145), Expect = 2e-10
Identities = 31/50 (62%), Positives = 35/50 (70%)
Frame = +1
Query: 508 IHQLVENTDETYCIDNEALYDICFPHAKTIHTHIRATLNHLVSLTMSGVT 657
+HQLVEN DE +DNEALYDICF K + T LNHL+S TMSGVT
Sbjct: 189 VHQLVENADECMVLDNEALYDICFRTLK-LTTPSFGDLNHLISATMSGVT 237
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 185 bits (451), Expect = 2e-47
Identities = 107/210 (50%), Positives = 123/210 (58%), Gaps = 6/210 (2%)
Frame = +2
Query: 2 FWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRAPR------HPRRLGARHH 163
FWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G+ PR P + +
Sbjct: 20 FWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRF-VPRAVLMDLEPGTMDSLRS 78
Query: 164 GLCPLWTFRTDLPSXXXXXXXXXXXXXXXXXHYTEGSELVDSVLDVVRKEAESCDCLQGF 343
G TFR D HYTEG+EL+DSVLDVVRKEAE+CDCLQGF
Sbjct: 79 GPYGQ-TFRPD----NFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF 133
Query: 344 QXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSFIN*L 523
Q KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLS +
Sbjct: 134 QVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLV 193
Query: 524 KTQTKPTVSTTRLSTISAFRTLKLSTPTYG 613
+ + V FRTLKL+TP++G
Sbjct: 194 ENADECMVLDNEALYDICFRTLKLTTPSFG 223
Score = 95.1 bits (226), Expect = 4e-20
Identities = 39/46 (84%), Positives = 45/46 (97%)
Frame = +3
Query: 117 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAK 254
++VPRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAK
Sbjct: 58 RFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAK 103
Score = 62.5 bits (145), Expect = 2e-10
Identities = 31/50 (62%), Positives = 35/50 (70%)
Frame = +1
Query: 508 IHQLVENTDETYCIDNEALYDICFPHAKTIHTHIRATLNHLVSLTMSGVT 657
+HQLVEN DE +DNEALYDICF K + T LNHL+S TMSGVT
Sbjct: 189 VHQLVENADECMVLDNEALYDICFRTLK-LTTPSFGDLNHLISATMSGVT 237
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 182 bits (442), Expect = 2e-46
Identities = 108/212 (50%), Positives = 124/212 (58%), Gaps = 8/212 (3%)
Frame = +2
Query: 2 FWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGQVRAPR------HPRRLGARH 160
FWE+I DEHGID TG Y GD+ DLQLERINVYYNEASGG+ PR P + +
Sbjct: 20 FWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY-VPRAVLMDLEPGTMDSIR 78
Query: 161 HGLCPLWT-FRTDLPSXXXXXXXXXXXXXXXXXHYTEGSELVDSVLDVVRKEAESCDCLQ 337
G P FR D HYTEG+EL+D+VLDVVRKEAE+CDCLQ
Sbjct: 79 SG--PFGQIFRPD----NFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQ 132
Query: 338 GFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSFIN 517
GFQ KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLS
Sbjct: 133 GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ 192
Query: 518 *LKTQTKPTVSTTRLSTISAFRTLKLSTPTYG 613
++ + V FRTLKLSTP++G
Sbjct: 193 LVENADECMVLDNEALYDICFRTLKLSTPSFG 224
Score = 100 bits (240), Expect = 7e-22
Identities = 42/46 (91%), Positives = 46/46 (100%)
Frame = +3
Query: 117 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAK 254
+YVPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAK
Sbjct: 59 RYVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAK 104
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/50 (62%), Positives = 35/50 (70%)
Frame = +1
Query: 508 IHQLVENTDETYCIDNEALYDICFPHAKTIHTHIRATLNHLVSLTMSGVT 657
+HQLVEN DE +DNEALYDICF K + T LNHL+S TMSGVT
Sbjct: 190 VHQLVENADECMVLDNEALYDICFRTLK-LSTPSFGDLNHLISATMSGVT 238
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 181 bits (441), Expect = 3e-46
Identities = 104/210 (49%), Positives = 123/210 (58%), Gaps = 6/210 (2%)
Frame = +2
Query: 2 FWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRAPR------HPRRLGARHH 163
FWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+ PR P + +
Sbjct: 20 FWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRY-VPRAILMDLEPGTMDSVRT 78
Query: 164 GLCPLWTFRTDLPSXXXXXXXXXXXXXXXXXHYTEGSELVDSVLDVVRKEAESCDCLQGF 343
G FR D HYTEG+EL+D+VLDVVRKEAE+CDCLQGF
Sbjct: 79 GPYGQ-IFRPD----NFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGF 133
Query: 344 QXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSFIN*L 523
Q KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLS +
Sbjct: 134 QVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLV 193
Query: 524 KTQTKPTVSTTRLSTISAFRTLKLSTPTYG 613
+ + V FRTLKL+TP++G
Sbjct: 194 ENADECMVLDNEALYDICFRTLKLTTPSFG 223
Score = 99.1 bits (236), Expect = 2e-21
Identities = 42/46 (91%), Positives = 46/46 (100%)
Frame = +3
Query: 117 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAK 254
+YVPRAIL+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAK
Sbjct: 58 RYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAK 103
Score = 62.5 bits (145), Expect = 2e-10
Identities = 31/50 (62%), Positives = 35/50 (70%)
Frame = +1
Query: 508 IHQLVENTDETYCIDNEALYDICFPHAKTIHTHIRATLNHLVSLTMSGVT 657
+HQLVEN DE +DNEALYDICF K + T LNHL+S TMSGVT
Sbjct: 189 VHQLVENADECMVLDNEALYDICFRTLK-LTTPSFGDLNHLISATMSGVT 237
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 178 bits (434), Expect = 2e-45
Identities = 104/210 (49%), Positives = 122/210 (58%), Gaps = 6/210 (2%)
Frame = +2
Query: 2 FWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRAPR------HPRRLGARHH 163
FWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+ PR P + +
Sbjct: 20 FWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRY-VPRAVLMDLEPGTMDSVRS 78
Query: 164 GLCPLWTFRTDLPSXXXXXXXXXXXXXXXXXHYTEGSELVDSVLDVVRKEAESCDCLQGF 343
G FR D HYTEG+EL+DSVLDVVRKEAE+CDCLQGF
Sbjct: 79 GPYGQ-IFRPD----NFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF 133
Query: 344 QXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSFIN*L 523
Q KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLS +
Sbjct: 134 QVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLV 193
Query: 524 KTQTKPTVSTTRLSTISAFRTLKLSTPTYG 613
+ + V FRTLKLSTP++G
Sbjct: 194 ENADECMVLDNEALYDICFRTLKLSTPSFG 223
Score = 99 bits (238), Expect = 1e-21
Identities = 42/46 (91%), Positives = 46/46 (100%)
Frame = +3
Query: 117 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAK 254
+YVPRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAK
Sbjct: 58 RYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAK 103
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/50 (62%), Positives = 35/50 (70%)
Frame = +1
Query: 508 IHQLVENTDETYCIDNEALYDICFPHAKTIHTHIRATLNHLVSLTMSGVT 657
+HQLVEN DE +DNEALYDICF K + T LNHL+S TMSGVT
Sbjct: 189 VHQLVENADECMVLDNEALYDICFRTLK-LSTPSFGDLNHLISATMSGVT 237
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 177 bits (432), Expect = 4e-45
Identities = 105/211 (49%), Positives = 121/211 (57%), Gaps = 7/211 (3%)
Frame = +2
Query: 2 FWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRAPR------HPRRLGARHH 163
FWE+I EHGID TG GD+DLQLERINVY+NEASGG+ PR P + +
Sbjct: 20 FWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKY-VPRAVLMDLEPGTMDSLRS 78
Query: 164 GLCPLWT-FRTDLPSXXXXXXXXXXXXXXXXXHYTEGSELVDSVLDVVRKEAESCDCLQG 340
G P FR D HYTEG+EL+DSVLDVVRKEAE+CDCLQG
Sbjct: 79 G--PFGQIFRPD----NFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 132
Query: 341 FQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSFIN* 520
FQ KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLS
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 521 LKTQTKPTVSTTRLSTISAFRTLKLSTPTYG 613
++ + V FRTLKL+ PT+G
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLANPTFG 223
Score = 101 bits (241), Expect = 6e-22
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +3
Query: 117 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAK 254
KYVPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAK
Sbjct: 58 KYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAK 103
Score = 61.7 bits (143), Expect = 4e-10
Identities = 30/50 (60%), Positives = 34/50 (68%)
Frame = +1
Query: 508 IHQLVENTDETYCIDNEALYDICFPHAKTIHTHIRATLNHLVSLTMSGVT 657
+HQLVEN DE +DNEALYDICF K + LNHL+S TMSGVT
Sbjct: 189 VHQLVENADECMVLDNEALYDICFRTLKLANPTF-GDLNHLISATMSGVT 237
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 177 bits (430), Expect = 7e-45
Identities = 102/210 (48%), Positives = 121/210 (57%), Gaps = 6/210 (2%)
Frame = +2
Query: 2 FWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRAPR------HPRRLGARHH 163
FWE++ EHGID TG Y G++DLQLER+NVYYNEAS G+ PR P + +
Sbjct: 20 FWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRF-VPRAVLMDLEPGTMDSVRS 78
Query: 164 GLCPLWTFRTDLPSXXXXXXXXXXXXXXXXXHYTEGSELVDSVLDVVRKEAESCDCLQGF 343
G FR D HYTEG+EL+DSVLDVVRKEAE+CDCLQGF
Sbjct: 79 GPYGQ-IFRPD----NFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF 133
Query: 344 QXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSFIN*L 523
Q KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLS +
Sbjct: 134 QVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLV 193
Query: 524 KTQTKPTVSTTRLSTISAFRTLKLSTPTYG 613
+ + V FRTLKL+TP++G
Sbjct: 194 ENADECMVLDNEALYDICFRTLKLTTPSFG 223
Score = 98.3 bits (234), Expect = 4e-21
Identities = 41/46 (89%), Positives = 46/46 (100%)
Frame = +3
Query: 117 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAK 254
++VPRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAK
Sbjct: 58 RFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAK 103
Score = 62.5 bits (145), Expect = 2e-10
Identities = 31/50 (62%), Positives = 35/50 (70%)
Frame = +1
Query: 508 IHQLVENTDETYCIDNEALYDICFPHAKTIHTHIRATLNHLVSLTMSGVT 657
+HQLVEN DE +DNEALYDICF K + T LNHL+S TMSGVT
Sbjct: 189 VHQLVENADECMVLDNEALYDICFRTLK-LTTPSFGDLNHLISATMSGVT 237
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 176 bits (428), Expect = 1e-44
Identities = 105/211 (49%), Positives = 121/211 (57%), Gaps = 7/211 (3%)
Frame = +2
Query: 2 FWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGQVRAPR------HPRRLGARHH 163
FWE+I DEHGID TG Y GDS LQLERI+VY+NEASGG+ PR P + +
Sbjct: 20 FWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKY-VPRAVLMDLEPGTMDSLRS 78
Query: 164 GLCPLWT-FRTDLPSXXXXXXXXXXXXXXXXXHYTEGSELVDSVLDVVRKEAESCDCLQG 340
G P FR D HYTEG+EL+DSVLDVVRKEAE+ DCLQG
Sbjct: 79 G--PFGQIFRPD----NFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENSDCLQG 132
Query: 341 FQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSFIN* 520
FQ KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLS
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 521 LKTQTKPTVSTTRLSTISAFRTLKLSTPTYG 613
++ + V FRTLKL+ PT+G
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLANPTFG 223
Score = 101 bits (241), Expect = 6e-22
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +3
Query: 117 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAK 254
KYVPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAK
Sbjct: 58 KYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAK 103
Score = 61.7 bits (143), Expect = 4e-10
Identities = 30/50 (60%), Positives = 34/50 (68%)
Frame = +1
Query: 508 IHQLVENTDETYCIDNEALYDICFPHAKTIHTHIRATLNHLVSLTMSGVT 657
+HQLVEN DE +DNEALYDICF K + LNHL+S TMSGVT
Sbjct: 189 VHQLVENADECMVLDNEALYDICFRTLKLANPTF-GDLNHLISATMSGVT 237
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 70.1 bits (164), Expect = 1e-12
Identities = 58/206 (28%), Positives = 85/206 (41%), Gaps = 4/206 (1%)
Frame = +2
Query: 5 WEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQVRAPRHPR-RLGARHHGLCP 175
WE+ EHGI P G GD + + N +++E G+ PR L
Sbjct: 21 WELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK-HVPRAVFVDLEPTVIDEVR 79
Query: 176 LWTFRTDLPSXXXXXXXXXXXXXXXXXHYTEGSELVDSVLDVVRKEAESCDCLQGFQXXX 355
T+R HYT G E+VD LD +RK A++C LQGF
Sbjct: 80 TGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFN 139
Query: 356 XXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSFIN*LK-TQ 532
++ +Y + ++V PSP+VS +VVEPYN+ LS + L+ T
Sbjct: 140 AVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTD 199
Query: 533 TKPTVSTTRLSTISAFRTLKLSTPTY 610
+ + I R+L + PTY
Sbjct: 200 VSILLDNEAIYDICR-RSLNIERPTY 224
Score = 57.2 bits (132), Expect = 9e-09
Identities = 23/48 (47%), Positives = 34/48 (70%)
Frame = +3
Query: 111 ADKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAK 254
A K+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+
Sbjct: 58 AGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFAR 105
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 70.1 bits (164), Expect = 1e-12
Identities = 58/206 (28%), Positives = 85/206 (41%), Gaps = 4/206 (1%)
Frame = +2
Query: 5 WEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQVRAPRHPR-RLGARHHGLCP 175
WE+ EHGI P G GD + + N +++E G+ PR L
Sbjct: 21 WELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK-HVPRAVFVDLEPTVIDEVR 79
Query: 176 LWTFRTDLPSXXXXXXXXXXXXXXXXXHYTEGSELVDSVLDVVRKEAESCDCLQGFQXXX 355
T+R HYT G E+VD LD +RK A++C LQGF
Sbjct: 80 TGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFN 139
Query: 356 XXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSFIN*LK-TQ 532
++ +Y + ++V PSP+VS +VVEPYN+ LS + L+ T
Sbjct: 140 AVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTD 199
Query: 533 TKPTVSTTRLSTISAFRTLKLSTPTY 610
+ + I R+L + PTY
Sbjct: 200 VSILLDNEAIYDICR-RSLNIERPTY 224
Score = 57.2 bits (132), Expect = 9e-09
Identities = 23/48 (47%), Positives = 34/48 (70%)
Frame = +3
Query: 111 ADKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAK 254
A K+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+
Sbjct: 58 AGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFAR 105
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 70.1 bits (164), Expect = 1e-12
Identities = 57/206 (27%), Positives = 86/206 (41%), Gaps = 4/206 (1%)
Frame = +2
Query: 5 WEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQVRAPRHP-RRLGARHHGLCP 175
WE+ EHGI P G DS + + N +++E S GQ PR L
Sbjct: 21 WELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ-HVPRAVFLDLEPTVIDEVR 79
Query: 176 LWTFRTDLPSXXXXXXXXXXXXXXXXXHYTEGSELVDSVLDVVRKEAESCDCLQGFQXXX 355
T+R HYT G E+VD+ L+ +RK A++C LQGF
Sbjct: 80 TGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADNCTGLQGFLVFN 139
Query: 356 XXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSFIN*LK-TQ 532
++ ++ + +++ PSP+VS VVEPYN+ LS + L+ T
Sbjct: 140 AVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTD 199
Query: 533 TKPTVSTTRLSTISAFRTLKLSTPTY 610
+ + I R+L + PTY
Sbjct: 200 VVVLLDNEAIYDICR-RSLDIERPTY 224
Score = 53.2 bits (122), Expect = 1e-07
Identities = 20/46 (43%), Positives = 33/46 (71%)
Frame = +3
Query: 117 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAK 254
++VPRA+ +DLEP +D VR+G + Q+F P+ + G+ A NN+A+
Sbjct: 60 QHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFAR 105
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 69.7 bits (163), Expect = 2e-12
Identities = 57/206 (27%), Positives = 85/206 (41%), Gaps = 4/206 (1%)
Frame = +2
Query: 5 WEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQVRAPRHPR-RLGARHHGLCP 175
WE+ EHGI P G D+ + + + N +++E G+ PR L
Sbjct: 21 WELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK-HVPRAVFVDLEPTVIDEVR 79
Query: 176 LWTFRTDLPSXXXXXXXXXXXXXXXXXHYTEGSELVDSVLDVVRKEAESCDCLQGFQXXX 355
T+R HYT G E+VD LD VRK A++C LQGF
Sbjct: 80 TGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFN 139
Query: 356 XXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSFIN*LK-TQ 532
++ +Y + +++ PSP+VS VVEPYN+ LS + L+ T
Sbjct: 140 AVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTD 199
Query: 533 TKPTVSTTRLSTISAFRTLKLSTPTY 610
+ + I R+L + PTY
Sbjct: 200 VAVLLDNEAIYDICR-RSLDIERPTY 224
Score = 57.2 bits (132), Expect = 9e-09
Identities = 23/48 (47%), Positives = 34/48 (70%)
Frame = +3
Query: 111 ADKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAK 254
A K+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+
Sbjct: 58 AGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFAR 105
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 69.7 bits (163), Expect = 2e-12
Identities = 57/206 (27%), Positives = 85/206 (41%), Gaps = 4/206 (1%)
Frame = +2
Query: 5 WEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQVRAPRHPR-RLGARHHGLCP 175
WE+ EHGI P G D+ + + + N +++E G+ PR L
Sbjct: 21 WELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK-HVPRAVFVDLEPTVIDEVR 79
Query: 176 LWTFRTDLPSXXXXXXXXXXXXXXXXXHYTEGSELVDSVLDVVRKEAESCDCLQGFQXXX 355
T+R HYT G E+VD LD VRK A++C LQGF
Sbjct: 80 TGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFN 139
Query: 356 XXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSFIN*LK-TQ 532
++ +Y + +++ PSP+VS VVEPYN+ LS + L+ T
Sbjct: 140 AVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTD 199
Query: 533 TKPTVSTTRLSTISAFRTLKLSTPTY 610
+ + I R+L + PTY
Sbjct: 200 VAVLLDNEAIYDICR-RSLDIERPTY 224
Score = 57.2 bits (132), Expect = 9e-09
Identities = 23/48 (47%), Positives = 34/48 (70%)
Frame = +3
Query: 111 ADKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAK 254
A K+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+
Sbjct: 58 AGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFAR 105
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 67.7 bits (158), Expect = 6e-12
Identities = 57/206 (27%), Positives = 84/206 (40%), Gaps = 4/206 (1%)
Frame = +2
Query: 5 WEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQVRAPRHPR-RLGARHHGLCP 175
WE+ EHGI P G D + + N +++E G+ PR L
Sbjct: 21 WELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK-HVPRAVFVDLEPTVIDEVR 79
Query: 176 LWTFRTDLPSXXXXXXXXXXXXXXXXXHYTEGSELVDSVLDVVRKEAESCDCLQGFQXXX 355
T+R HYT G E+VD LD +RK A++C LQGF
Sbjct: 80 TGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFN 139
Query: 356 XXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSFIN*LK-TQ 532
++ +Y + ++V PSP+VS +VVEPYN+ LS + L+ T
Sbjct: 140 AVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTD 199
Query: 533 TKPTVSTTRLSTISAFRTLKLSTPTY 610
+ + I R+L + PTY
Sbjct: 200 VSILLDNEAIYDICR-RSLSIERPTY 224
Score = 57.2 bits (132), Expect = 9e-09
Identities = 23/48 (47%), Positives = 34/48 (70%)
Frame = +3
Query: 111 ADKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAK 254
A K+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+
Sbjct: 58 AGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFAR 105
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 67.7 bits (158), Expect = 6e-12
Identities = 57/206 (27%), Positives = 84/206 (40%), Gaps = 4/206 (1%)
Frame = +2
Query: 5 WEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGQVRAPRHPR-RLGARHHGLCP 175
WE+ EHGI P G D + + N +++E G+ PR L
Sbjct: 21 WELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK-HVPRAVFVDLEPTVIDEVR 79
Query: 176 LWTFRTDLPSXXXXXXXXXXXXXXXXXHYTEGSELVDSVLDVVRKEAESCDCLQGFQXXX 355
T+R HYT G E+VD LD +RK A++C LQGF
Sbjct: 80 TGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFN 139
Query: 356 XXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSFIN*LK-TQ 532
++ +Y + ++V PSP+VS +VVEPYN+ LS + L+ T
Sbjct: 140 AVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTD 199
Query: 533 TKPTVSTTRLSTISAFRTLKLSTPTY 610
+ + I R+L + PTY
Sbjct: 200 VSILLDNEAIYDICR-RSLSIERPTY 224
Score = 57.2 bits (132), Expect = 9e-09
Identities = 23/48 (47%), Positives = 34/48 (70%)
Frame = +3
Query: 111 ADKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAK 254
A K+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+
Sbjct: 58 AGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFAR 105
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 53.6 bits (123), Expect = 1e-07
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Frame = +2
Query: 260 YTEGSELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 439
Y +G + + ++D++ +EA+ D L+GF + + Y +++
Sbjct: 108 YHQGKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQ 167
Query: 440 TYSVVPSP-KVSDTVVEPYNATLSFIN-*LKTQTKPTVSTTRLSTISAFRTLKLSTPTYG 613
TYSV P+ + SD VV+PYN+ L+ L + T L+ I+ R L L+ PT+
Sbjct: 168 TYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVER-LHLTNPTFA 226
Query: 614 R 616
+
Sbjct: 227 Q 227
Score = 47.6 bits (108), Expect = 7e-06
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Frame = +3
Query: 120 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWA 251
Y+PRA+L+DLEP ++ +++G + ++ +N GAGNNWA
Sbjct: 60 YIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWA 105
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 53.2 bits (122), Expect = 1e-07
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Frame = +2
Query: 260 YTEGSELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 439
Y +G + + ++D++ +EA+ D L+GF + + Y +++
Sbjct: 108 YHQGKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQ 167
Query: 440 TYSVVPSP-KVSDTVVEPYNATLSFIN-*LKTQTKPTVSTTRLSTISAFRTLKLSTPTYG 613
TYSV P+ + SD VV+PYN+ L+ L + T L I+ R L L+ PT+
Sbjct: 168 TYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVER-LHLTNPTFA 226
Query: 614 R 616
+
Sbjct: 227 Q 227
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Frame = +3
Query: 120 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWA 251
Y+PRA+L+DLEP ++ +++G + ++ +N GAGNNWA
Sbjct: 60 YIPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWA 105
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 31.5 bits (68), Expect = 0.51
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = +2
Query: 278 LVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVP 457
+++SV VVRKEAE+C+CLQ F RE D + Y V
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF--FVSGSFKVDSVEAKKKEENFRETLRDMANSKYEYVK 57
Query: 458 SPKVSDTVVEP 490
S ++ D V+ P
Sbjct: 58 SFELEDEVMLP 68
>At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 656
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -3
Query: 395 GGCPYRNRCRRRASVSVGIPGGNHTIPLPFERRLKLNRRAQNPPCS 258
G CP R R S G GG P+P RR KL P CS
Sbjct: 32 GSCPRRRIQERFKSEQGGGGGGGDDFPVPVTRR-KLRAEPNCPRCS 76
>At4g22070.1 68417.m03192 WRKY family transcription factor identical
to WRKY transcription factor 31 (WRKY31) GI:15990589
from [Arabidopsis thaliana]
Length = 538
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Frame = -3
Query: 395 GGCPYRN---RCRRRASVSVGIPGGNHTIPLP 309
GGCP R RC S+ + GNH PLP
Sbjct: 326 GGCPVRKQVQRCAEDRSILITTYEGNHNHPLP 357
>At2g40940.1 68415.m05055 ethylene response sensor /
ethylene-responsive sensor (ERS) identical to ethylene
response sensor (ERS) [Arabidopsis thaliana] GI:1046225
Length = 613
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +1
Query: 484 RTVQRHTFIHQLVENTDETYCIDNEALYDICFPHAKTIHTHIRATLNHLVSLTMS 648
RT+ RHT + + +T C++ AL+ P ++ + TL+H + + S
Sbjct: 155 RTLDRHTILRTTLVELGKTLCLEECALW---MPSQSGLYLQLSHTLSHKIQVGSS 206
>At1g76440.2 68414.m08888 expressed protein
Length = 143
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = -1
Query: 214 KLSGRKICPKGPERTESMVPGSKSTRMARGTYLSAGGFIVVYIDALQLQVRVP 56
++ +++CP GP +PG R+ + S G F VV + +L VR+P
Sbjct: 92 RMQVQQLCPPGPFSITFNLPGQVDPRLFSPNFRSDGIFEVVVV---KLGVRIP 141
>At1g76440.1 68414.m08887 expressed protein
Length = 143
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = -1
Query: 214 KLSGRKICPKGPERTESMVPGSKSTRMARGTYLSAGGFIVVYIDALQLQVRVP 56
++ +++CP GP +PG R+ + S G F VV + +L VR+P
Sbjct: 92 RMQVQQLCPPGPFSITFNLPGQVDPRLFSPNFRSDGIFEVVVV---KLGVRIP 141
>At1g17450.1 68414.m02137 ATP phosphoribosyltransferase -related
contains weak similarity to Swiss-Prot:P10366 ATP
phosphoribosyltransferase [Escherichia coli]
Length = 1402
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -3
Query: 257 VLGPVVAGAGLSEDEVVRTEDLSERSRADRVHGAGLQVDEDGAGHVLVRR 108
VLG V+ G+ EDE++ D+ +A V + +G G + R
Sbjct: 1340 VLGTVMQNPGIPEDEIINLMDILNPQKASGVDDTRRLYESEGNGANQIHR 1389
>At3g50660.1 68416.m05541 steroid 22-alpha-hydroxylase (CYP90B1)
(DWF4) identical to gi:2935342
Length = 513
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -3
Query: 221 EDEVVRTEDLSERSRADRVHGAGLQVDEDGAGHVLVRRRL 102
E+E V+TED +E S++D V + D+D G VL L
Sbjct: 259 EEEEVKTEDEAEMSKSDHVRKQ--RTDDDLLGWVLKHSNL 296
>At2g47830.2 68415.m05970 cation efflux family protein / metal
tolerance protein, putative (MTPc1) member of the cation
diffusion facilitator (CDF) family, or cation efflux
(CE) family, PMID:11500563
Length = 468
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 373 RFRYGHPPHLQNQRRVP*QNNEHIFSCTIT*SVGHS 480
R+ +GHP H Q Q + P + E IF +T +G S
Sbjct: 54 RWHFGHPDHHQ-QYQKPGEEGEKIFRLGLTADIGLS 88
>At2g47830.1 68415.m05969 cation efflux family protein / metal
tolerance protein, putative (MTPc1) member of the cation
diffusion facilitator (CDF) family, or cation efflux
(CE) family, PMID:11500563
Length = 471
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 373 RFRYGHPPHLQNQRRVP*QNNEHIFSCTIT*SVGHS 480
R+ +GHP H Q Q + P + E IF +T +G S
Sbjct: 54 RWHFGHPDHHQ-QYQKPGEEGEKIFRLGLTADIGLS 88
>At2g28880.1 68415.m03510 para-aminobenzoate (PABA) synthase family
protein similar to PABA synthase from Streptomyces
griseus [SP|P32483], Streptomyces pristinaespiralis
[gi:1575336]; contains Pfam profiles PF00425:
chorismate binding enzyme, PF00117: glutamine
amidotransferase class-I, PF04715: Anthranilate synthase
component I, N terminal region
Length = 919
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -3
Query: 305 ERRLKLNRRAQNPPCSVLGPVVAGAGLSEDEVVRTE-DLSERSRADRV 165
ER LKL+R + G + G+ EDE ++ + LSE+++A+ +
Sbjct: 715 ERFLKLDRNGMLEAKPIKGTIARGSTPEEDEFLKLQLKLSEKNQAENL 762
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,127,705
Number of Sequences: 28952
Number of extensions: 286093
Number of successful extensions: 921
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1373722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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