Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30300
(777 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 150 9e-37
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 150 9e-37
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 149 2e-36
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 149 2e-36
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 139 2e-33
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 139 2e-33
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 134 6e-32
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 81 6e-16
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 79 2e-15
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 79 2e-15
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 79 2e-15
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 78 7e-15
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 77 1e-14
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 77 1e-14
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 77 2e-14
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 73 3e-13
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 55 5e-08
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 55 5e-08
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 29 2.6
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 3.4
At1g52160.1 68414.m05887 metallo-beta-lactamase family protein 29 3.4
At1g62700.1 68414.m07077 no apical meristem (NAM) family protein... 28 6.0
At1g07160.1 68414.m00762 protein phosphatase 2C, putative / PP2C... 28 6.0
At3g19180.1 68416.m02435 cell division protein-related weak simi... 28 7.9
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 150 bits (364), Expect = 9e-37
Identities = 61/68 (89%), Positives = 68/68 (100%)
Frame = +1
Query: 43 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 222
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 223 HVPRAVFV 246
HVPRAVFV
Sbjct: 61 HVPRAVFV 68
Score = 140 bits (339), Expect = 9e-34
Identities = 65/85 (76%), Positives = 71/85 (83%)
Frame = +3
Query: 255 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 434
PTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTG
Sbjct: 72 PTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTG 131
Query: 435 LQGFLIFHXXXXXXXXXXXXLLMER 509
LQGFL+F+ LL+ER
Sbjct: 132 LQGFLVFNAVGGGTGSGLGSLLLER 156
Score = 96.7 bits (230), Expect = 2e-20
Identities = 49/86 (56%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +2
Query: 509 LSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIWPP* 688
LSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDI
Sbjct: 157 LSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICR-- 214
Query: 689 SRH*AAQPTPT*I-RSSDKIVSSITA 763
+PT T + R +++SS+TA
Sbjct: 215 RSLSIERPTYTNLNRLVSQVISSLTA 240
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 150 bits (364), Expect = 9e-37
Identities = 61/68 (89%), Positives = 68/68 (100%)
Frame = +1
Query: 43 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 222
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 223 HVPRAVFV 246
HVPRAVFV
Sbjct: 61 HVPRAVFV 68
Score = 140 bits (339), Expect = 9e-34
Identities = 65/85 (76%), Positives = 71/85 (83%)
Frame = +3
Query: 255 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 434
PTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTG
Sbjct: 72 PTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTG 131
Query: 435 LQGFLIFHXXXXXXXXXXXXLLMER 509
LQGFL+F+ LL+ER
Sbjct: 132 LQGFLVFNAVGGGTGSGLGSLLLER 156
Score = 96.7 bits (230), Expect = 2e-20
Identities = 49/86 (56%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +2
Query: 509 LSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIWPP* 688
LSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDI
Sbjct: 157 LSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICR-- 214
Query: 689 SRH*AAQPTPT*I-RSSDKIVSSITA 763
+PT T + R +++SS+TA
Sbjct: 215 RSLSIERPTYTNLNRLVSQVISSLTA 240
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 149 bits (361), Expect = 2e-36
Identities = 61/68 (89%), Positives = 67/68 (98%)
Frame = +1
Query: 43 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 222
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 223 HVPRAVFV 246
HVPRAVFV
Sbjct: 61 HVPRAVFV 68
Score = 140 bits (339), Expect = 9e-34
Identities = 65/85 (76%), Positives = 71/85 (83%)
Frame = +3
Query: 255 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 434
PTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTG
Sbjct: 72 PTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTG 131
Query: 435 LQGFLIFHXXXXXXXXXXXXLLMER 509
LQGFL+F+ LL+ER
Sbjct: 132 LQGFLVFNAVGGGTGSGLGSLLLER 156
Score = 97.1 bits (231), Expect = 1e-20
Identities = 49/86 (56%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +2
Query: 509 LSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIWPP* 688
LSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDI
Sbjct: 157 LSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRS 216
Query: 689 SRH*AAQPTPT*I-RSSDKIVSSITA 763
+PT T + R +++SS+TA
Sbjct: 217 LN--IERPTYTNLNRLVSQVISSLTA 240
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 149 bits (361), Expect = 2e-36
Identities = 61/68 (89%), Positives = 67/68 (98%)
Frame = +1
Query: 43 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 222
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 223 HVPRAVFV 246
HVPRAVFV
Sbjct: 61 HVPRAVFV 68
Score = 140 bits (339), Expect = 9e-34
Identities = 65/85 (76%), Positives = 71/85 (83%)
Frame = +3
Query: 255 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 434
PTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTG
Sbjct: 72 PTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTG 131
Query: 435 LQGFLIFHXXXXXXXXXXXXLLMER 509
LQGFL+F+ LL+ER
Sbjct: 132 LQGFLVFNAVGGGTGSGLGSLLLER 156
Score = 97.1 bits (231), Expect = 1e-20
Identities = 49/86 (56%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +2
Query: 509 LSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIWPP* 688
LSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDI
Sbjct: 157 LSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRS 216
Query: 689 SRH*AAQPTPT*I-RSSDKIVSSITA 763
+PT T + R +++SS+TA
Sbjct: 217 LN--IERPTYTNLNRLVSQVISSLTA 240
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 139 bits (337), Expect = 2e-33
Identities = 63/85 (74%), Positives = 71/85 (83%)
Frame = +3
Query: 255 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 434
PTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RKLAD CTG
Sbjct: 72 PTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTG 131
Query: 435 LQGFLIFHXXXXXXXXXXXXLLMER 509
LQGFL+F+ LL+ER
Sbjct: 132 LQGFLVFNAVGGGTGSGLGSLLLER 156
Score = 132 bits (318), Expect = 3e-31
Identities = 54/68 (79%), Positives = 62/68 (91%)
Frame = +1
Query: 43 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 222
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 223 HVPRAVFV 246
HVPRAVFV
Sbjct: 61 HVPRAVFV 68
Score = 98.7 bits (235), Expect = 4e-21
Identities = 44/56 (78%), Positives = 51/56 (91%)
Frame = +2
Query: 509 LSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 676
LSVDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDI
Sbjct: 157 LSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDI 212
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 139 bits (337), Expect = 2e-33
Identities = 63/85 (74%), Positives = 71/85 (83%)
Frame = +3
Query: 255 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 434
PTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RKLAD CTG
Sbjct: 72 PTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTG 131
Query: 435 LQGFLIFHXXXXXXXXXXXXLLMER 509
LQGFL+F+ LL+ER
Sbjct: 132 LQGFLVFNAVGGGTGSGLGSLLLER 156
Score = 132 bits (318), Expect = 3e-31
Identities = 54/68 (79%), Positives = 62/68 (91%)
Frame = +1
Query: 43 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 222
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 223 HVPRAVFV 246
HVPRAVFV
Sbjct: 61 HVPRAVFV 68
Score = 98.7 bits (235), Expect = 4e-21
Identities = 44/56 (78%), Positives = 51/56 (91%)
Frame = +2
Query: 509 LSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 676
LSVDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDI
Sbjct: 157 LSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDI 212
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 134 bits (324), Expect = 6e-32
Identities = 60/85 (70%), Positives = 70/85 (82%)
Frame = +3
Query: 255 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 434
PTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIVD L+R+RKLAD CTG
Sbjct: 72 PTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADNCTG 131
Query: 435 LQGFLIFHXXXXXXXXXXXXLLMER 509
LQGFL+F+ LL+ER
Sbjct: 132 LQGFLVFNAVGGGTGSGLGSLLLER 156
Score = 125 bits (302), Expect = 3e-29
Identities = 50/68 (73%), Positives = 61/68 (89%)
Frame = +1
Query: 43 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 222
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 223 HVPRAVFV 246
HVPRAVF+
Sbjct: 61 HVPRAVFL 68
Score = 95.5 bits (227), Expect = 3e-20
Identities = 42/56 (75%), Positives = 50/56 (89%)
Frame = +2
Query: 509 LSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 676
LSVD+GKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D ++DNEAIYDI
Sbjct: 157 LSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDI 212
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 81.4 bits (192), Expect = 6e-16
Identities = 34/68 (50%), Positives = 46/68 (67%)
Frame = +3
Query: 255 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 434
P +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 70 PGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDC 129
Query: 435 LQGFLIFH 458
LQGF + H
Sbjct: 130 LQGFQVCH 137
Score = 61.3 bits (142), Expect = 7e-10
Identities = 25/61 (40%), Positives = 42/61 (68%)
Frame = +2
Query: 494 LIDGALSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 673
L+ + +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YD
Sbjct: 150 LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 674 I 676
I
Sbjct: 210 I 210
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +1
Query: 43 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 213
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGNSDLQLERVNVYYNEAS 55
Query: 214 AGKHVPRAVFV 246
G++VPRA+ +
Sbjct: 56 CGRYVPRAILM 66
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 79.4 bits (187), Expect = 2e-15
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = +3
Query: 255 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 434
P +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 70 PGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDC 129
Query: 435 LQGFLIFH 458
LQGF + H
Sbjct: 130 LQGFQVCH 137
Score = 61.3 bits (142), Expect = 7e-10
Identities = 25/61 (40%), Positives = 42/61 (68%)
Frame = +2
Query: 494 LIDGALSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 673
L+ + +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YD
Sbjct: 150 LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 674 I 676
I
Sbjct: 210 I 210
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/68 (36%), Positives = 37/68 (54%)
Frame = +1
Query: 43 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 222
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDL--QLERVNVYYNEASCGR 58
Query: 223 HVPRAVFV 246
VPRAV +
Sbjct: 59 FVPRAVLM 66
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 79.4 bits (187), Expect = 2e-15
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = +3
Query: 255 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 434
P +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 70 PGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDC 129
Query: 435 LQGFLIFH 458
LQGF + H
Sbjct: 130 LQGFQVCH 137
Score = 60.5 bits (140), Expect = 1e-09
Identities = 24/61 (39%), Positives = 42/61 (68%)
Frame = +2
Query: 494 LIDGALSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 673
L+ + +Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YD
Sbjct: 150 LLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 674 I 676
I
Sbjct: 210 I 210
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/68 (38%), Positives = 39/68 (57%)
Frame = +1
Query: 43 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 222
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSEL--QLERVNVYYNEASCGR 58
Query: 223 HVPRAVFV 246
+VPRAV +
Sbjct: 59 YVPRAVLM 66
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 79.4 bits (187), Expect = 2e-15
Identities = 32/68 (47%), Positives = 46/68 (67%)
Frame = +3
Query: 255 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 434
P +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 71 PGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDC 130
Query: 435 LQGFLIFH 458
LQGF + H
Sbjct: 131 LQGFQVCH 138
Score = 61.3 bits (142), Expect = 7e-10
Identities = 25/61 (40%), Positives = 42/61 (68%)
Frame = +2
Query: 494 LIDGALSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 673
L+ + +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YD
Sbjct: 151 LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 210
Query: 674 I 676
I
Sbjct: 211 I 211
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/68 (39%), Positives = 40/68 (58%)
Frame = +1
Query: 43 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 222
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + + N +++E G+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD-SADLQLERINVYYNEASGGR 59
Query: 223 HVPRAVFV 246
+VPRAV +
Sbjct: 60 YVPRAVLM 67
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 77.8 bits (183), Expect = 7e-15
Identities = 31/68 (45%), Positives = 46/68 (67%)
Frame = +3
Query: 255 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 434
P +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 71 PGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDC 130
Query: 435 LQGFLIFH 458
LQGF + H
Sbjct: 131 LQGFQVCH 138
Score = 61.3 bits (142), Expect = 7e-10
Identities = 25/61 (40%), Positives = 42/61 (68%)
Frame = +2
Query: 494 LIDGALSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 673
L+ + +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YD
Sbjct: 151 LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 210
Query: 674 I 676
I
Sbjct: 211 I 211
Score = 56.0 bits (129), Expect = 3e-08
Identities = 27/68 (39%), Positives = 39/68 (57%)
Frame = +1
Query: 43 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 222
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 223 HVPRAVFV 246
+VPRAV +
Sbjct: 60 YVPRAVLM 67
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 77.0 bits (181), Expect = 1e-14
Identities = 32/68 (47%), Positives = 45/68 (66%)
Frame = +3
Query: 255 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 434
P +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 70 PGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDC 129
Query: 435 LQGFLIFH 458
LQGF + H
Sbjct: 130 LQGFQVCH 137
Score = 61.3 bits (142), Expect = 7e-10
Identities = 25/61 (40%), Positives = 42/61 (68%)
Frame = +2
Query: 494 LIDGALSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 673
L+ + +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YD
Sbjct: 150 LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 674 I 676
I
Sbjct: 210 I 210
Score = 58.0 bits (134), Expect = 6e-09
Identities = 27/68 (39%), Positives = 38/68 (55%)
Frame = +1
Query: 43 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 222
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 223 HVPRAVFV 246
VPRAV +
Sbjct: 59 FVPRAVLM 66
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 77.0 bits (181), Expect = 1e-14
Identities = 32/68 (47%), Positives = 45/68 (66%)
Frame = +3
Query: 255 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 434
P +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 70 PGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDC 129
Query: 435 LQGFLIFH 458
LQGF + H
Sbjct: 130 LQGFQVCH 137
Score = 61.3 bits (142), Expect = 7e-10
Identities = 25/61 (40%), Positives = 42/61 (68%)
Frame = +2
Query: 494 LIDGALSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 673
L+ + +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YD
Sbjct: 150 LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 674 I 676
I
Sbjct: 210 I 210
Score = 58.0 bits (134), Expect = 6e-09
Identities = 27/68 (39%), Positives = 38/68 (55%)
Frame = +1
Query: 43 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 222
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 223 HVPRAVFV 246
VPRAV +
Sbjct: 59 FVPRAVLM 66
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 76.6 bits (180), Expect = 2e-14
Identities = 31/68 (45%), Positives = 46/68 (67%)
Frame = +3
Query: 255 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 434
P +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 70 PGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDC 129
Query: 435 LQGFLIFH 458
LQGF + H
Sbjct: 130 LQGFQVCH 137
Score = 60.5 bits (140), Expect = 1e-09
Identities = 24/61 (39%), Positives = 42/61 (68%)
Frame = +2
Query: 494 LIDGALSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 673
L+ + +Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YD
Sbjct: 150 LLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 674 I 676
I
Sbjct: 210 I 210
Score = 57.6 bits (133), Expect = 9e-09
Identities = 29/68 (42%), Positives = 38/68 (55%)
Frame = +1
Query: 43 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 222
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNEASGGK 58
Query: 223 HVPRAVFV 246
+VPRAV +
Sbjct: 59 YVPRAVLM 66
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 72.5 bits (170), Expect = 3e-13
Identities = 30/68 (44%), Positives = 45/68 (66%)
Frame = +3
Query: 255 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 434
P +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+
Sbjct: 70 PGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENSDC 129
Query: 435 LQGFLIFH 458
LQGF + H
Sbjct: 130 LQGFQVCH 137
Score = 60.5 bits (140), Expect = 1e-09
Identities = 24/61 (39%), Positives = 42/61 (68%)
Frame = +2
Query: 494 LIDGALSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 673
L+ + +Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YD
Sbjct: 150 LLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 674 I 676
I
Sbjct: 210 I 210
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/68 (41%), Positives = 38/68 (55%)
Frame = +1
Query: 43 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 222
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL--QLERIDVYFNEASGGK 58
Query: 223 HVPRAVFV 246
+VPRAV +
Sbjct: 59 YVPRAVLM 66
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/67 (41%), Positives = 38/67 (56%)
Frame = +1
Query: 46 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 225
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 226 VPRAVFV 246
+PRA+ +
Sbjct: 61 IPRALLI 67
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 521 YGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 667
Y KK ++++P + S VV+PYNS+LT ++DC ++DN A+
Sbjct: 161 YSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTAL 210
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/67 (41%), Positives = 38/67 (56%)
Frame = +1
Query: 46 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 225
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 226 VPRAVFV 246
+PRA+ +
Sbjct: 61 IPRALLI 67
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 521 YGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 667
Y KK ++++P + S VV+PYNS+LT ++DC ++DN A+
Sbjct: 161 YSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTAL 210
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 479 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYD 381
+G TEGVED S LV D ++ QI D
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRD 641
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -2
Query: 212 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 87
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At1g52160.1 68414.m05887 metallo-beta-lactamase family protein
Length = 890
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = -1
Query: 249 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITD---LDS 79
+ E G+ + SG + E + ++ D + H A DA+++ T +D
Sbjct: 748 VGEQILGWKMVYSGDSRPCPETVEASRDATILIHEATFEDALIEEALAKNHSTTKEAIDV 807
Query: 78 G-LANVYRDALTHF 40
G ANVYR LTHF
Sbjct: 808 GSAANVYRIVLTHF 821
>At1g62700.1 68414.m07077 no apical meristem (NAM) family protein
similar to NAC2 (GI:6456751) [Arabidopsis thaliana];
contains Pfam PF02365 : No apical meristem (NAM) protein
Length = 394
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = -1
Query: 306 DETTVCMCQCGPHQQQ*VKIDEDSTGYVLASSG--LAEESVERIVSTPDGLVCGHLA 142
DE + HQ VKID +TGY + G L E ER+V + H A
Sbjct: 329 DEEAAAVVSSSSHQNN-VKIDTRNTGYHVIDEGINLPENDSERVVEMGEEYSNAHAA 384
>At1g07160.1 68414.m00762 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase 2C GI:2582800
from [Medicago sativa]
Length = 380
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 119 WSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPVLSSSILTYC 262
+S +SSL P ET+ +LS P ++ST P +S +C
Sbjct: 13 FSPSSSLFCNKPLNTSPAHETLTLSLSHLNPPVSSTSPSAASPTSPFC 60
>At3g19180.1 68416.m02435 cell division protein-related weak
similarity to cell division protein Ftn2 [Synechococcus
sp. PCC 7942] GI:16226084
Length = 819
Score = 27.9 bits (59), Expect = 7.9
Identities = 29/98 (29%), Positives = 41/98 (41%)
Frame = +2
Query: 26 KKLKSKCVSASLYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSA 205
K+L+S SA ++ ESRS S AW S++A P TR G L+ A
Sbjct: 427 KQLESNSDSAVRNSILGKESRSTSATPSLEAWL-MESVLANFPDTR--GCSPSLANFFRA 483
Query: 206 RPELASTYPVLSSSILTYCC**GPHWHIQTVVSSRTTY 319
+ + S SI+ + P Q V SS+ Y
Sbjct: 484 EKKYPENKKMGSPSIMNHKTNQRPLSTTQFVNSSQHLY 521
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,852,693
Number of Sequences: 28952
Number of extensions: 398195
Number of successful extensions: 1251
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1245
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1736283200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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