Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30299
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    28   0.065
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    24   1.4  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    23   2.4  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   3.2  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   9.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   9.8  

>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 28.3 bits (60), Expect = 0.065
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -3

Query: 612 HLLSHQHNRLHQLHICF*SHYRHGVCPSRLHTPQESGHKEVRL 484
           HL+ H+ N  H+L   F  H  H +    LH  + + H+EV+L
Sbjct: 87  HLMIHRPNWWHELETKFNPH--HEIKLQHLHQSKFNPHEEVKL 127


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 215 LSLNGLKKYQYVIKLWWGY 159
           L+   LK+Y   +KLWW +
Sbjct: 45  LAKGSLKQYTCELKLWWEF 63


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 371 TSSPPCKTTICP 336
           T + PCK TICP
Sbjct: 3   THTLPCKCTICP 14


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +3

Query: 216 NCLSLYHRTWQRRVYGPWHS 275
           +C + +   W +R Y  W+S
Sbjct: 189 DCWATFQEPWGKRAYVTWYS 208


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 525 LHTPQESGHKEVRLACTNI 469
           L  PQ   H+EV+  C+++
Sbjct: 262 LVNPQSLNHQEVKAECSDL 280


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -2

Query: 391 HQYHSGSHLH 362
           H +H+G H+H
Sbjct: 322 HHHHAGHHIH 331


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,161
Number of Sequences: 336
Number of extensions: 4424
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)