Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30299
         (707 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061085-1|AAL28633.1|  491|Drosophila melanogaster LD07362p pro...    78   1e-14
AE014297-1514|AAF54806.2|  491|Drosophila melanogaster CG5663-PA...    78   1e-14

>AY061085-1|AAL28633.1|  491|Drosophila melanogaster LD07362p
           protein.
          Length = 491

 Score = 78.2 bits (184), Expect = 1e-14
 Identities = 47/98 (47%), Positives = 60/98 (61%), Gaps = 15/98 (15%)
 Frame = +1

Query: 259 MGPGTLEVPLSLFATNRRRLAN----------KLKSGQIVVL-QGGEDVNHYDTDVQYVF 405
           MG G   VP++LF  NR R             K   G ++VL +GG+D + Y+TDV YVF
Sbjct: 6   MGSG-YAVPMTLFRNNRDRAGKAILKELLPGLKFNDGNLLVLLEGGKDQSLYNTDVDYVF 64

Query: 406 RQEAYFTWVCGVREPGCY--FALDVSTG--KSYLFVPR 507
           RQE+YF ++ GV+EPGCY    +DV TG  KS LFVPR
Sbjct: 65  RQESYFQYLFGVKEPGCYGILTIDVKTGAQKSVLFVPR 102



 Score = 58.4 bits (135), Expect = 9e-09
 Identities = 29/66 (43%), Positives = 40/66 (60%)
 Frame = +3

Query: 510 PEEYEVWMGKLHACSDFKNIYAVDEVYYVDEIKDVLKSLMPETLA*HCLGPNTDSGLTAR 689
           P+EY  WMG+L    +FK +Y VDEV+YVDE+   L+   P+ +     G N+DSGLT +
Sbjct: 104 PDEYGTWMGELLGLQEFKAMYEVDEVFYVDEMSVYLEGASPKLIL-TLSGTNSDSGLTLQ 162

Query: 690 *AIFNG 707
              F G
Sbjct: 163 PPDFAG 168


>AE014297-1514|AAF54806.2|  491|Drosophila melanogaster CG5663-PA
           protein.
          Length = 491

 Score = 78.2 bits (184), Expect = 1e-14
 Identities = 47/98 (47%), Positives = 60/98 (61%), Gaps = 15/98 (15%)
 Frame = +1

Query: 259 MGPGTLEVPLSLFATNRRRLAN----------KLKSGQIVVL-QGGEDVNHYDTDVQYVF 405
           MG G   VP++LF  NR R             K   G ++VL +GG+D + Y+TDV YVF
Sbjct: 6   MGSG-YAVPMTLFRNNRDRAGKAILKELLPGLKFNDGNLLVLLEGGKDQSLYNTDVDYVF 64

Query: 406 RQEAYFTWVCGVREPGCY--FALDVSTG--KSYLFVPR 507
           RQE+YF ++ GV+EPGCY    +DV TG  KS LFVPR
Sbjct: 65  RQESYFQYLFGVKEPGCYGILTIDVKTGAQKSVLFVPR 102



 Score = 58.4 bits (135), Expect = 9e-09
 Identities = 29/66 (43%), Positives = 40/66 (60%)
 Frame = +3

Query: 510 PEEYEVWMGKLHACSDFKNIYAVDEVYYVDEIKDVLKSLMPETLA*HCLGPNTDSGLTAR 689
           P+EY  WMG+L    +FK +Y VDEV+YVDE+   L+   P+ +     G N+DSGLT +
Sbjct: 104 PDEYGTWMGELLGLQEFKAMYEVDEVFYVDEMSVYLEGASPKLIL-TLSGTNSDSGLTLQ 162

Query: 690 *AIFNG 707
              F G
Sbjct: 163 PPDFAG 168


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,187,269
Number of Sequences: 53049
Number of extensions: 736546
Number of successful extensions: 1568
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1564
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)