Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30299
         (707 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   1.6  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   1.6  
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    23   2.1  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   5.0  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          22   6.6  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   6.6  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   6.6  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   8.7  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 188 QYVIKLWWGYKTDYMSF 138
           QY  ++W GYK D  SF
Sbjct: 631 QYNSRIWGGYKFDKRSF 647


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 188 QYVIKLWWGYKTDYMSF 138
           QY  ++W GYK D  SF
Sbjct: 631 QYNSRIWGGYKFDKRSF 647


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 561 KNIYAVDEVYYVDEIKDVLKSLMPETLA*HC 653
           K ++ + +  + D I   +K L+PE L  HC
Sbjct: 35  KQLHCILDRGHCDVIGKKIKELLPEVLNNHC 65


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 325 YLLIFVGLLRTKITALQ 275
           YLL+F+GL    +T +Q
Sbjct: 247 YLLVFIGLQSLSLTNIQ 263


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = -1

Query: 203 GLKKYQYVIKLWWGYK 156
           G+ + + ++ +WW YK
Sbjct: 60  GIHRKKVLLSVWWDYK 75


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = -1

Query: 203 GLKKYQYVIKLWWGYK 156
           G+ + + ++ +WW YK
Sbjct: 182 GIHRKKVLLSVWWDYK 197


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -1

Query: 176 KLWWGYKTDYMSFD 135
           K WW  K   +SFD
Sbjct: 365 KWWWNMKISNLSFD 378


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
 Frame = -3

Query: 279 FKSARAHRHVAAMFDDIMKGNF--IFE--WFEKISIRDKT 172
           + SA+ HR +    DD  KG +  +++  W + I+ R  T
Sbjct: 264 YLSAKGHRPIDDNIDDEFKGTYKTLYKQMWSQNITERPTT 303


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,295
Number of Sequences: 438
Number of extensions: 5242
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)