Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30296
         (509 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            25   1.1  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   2.6  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   6.0  
DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    23   6.0  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -3

Query: 114  PGCVSTDRNVRSKCRCSNVSCSSHYDAQLTAFFIDPR 4
            P    T  NVR+  + + V+ S+  + QLTA   DPR
Sbjct: 1230 PNISLTHSNVRNSYQLTRVAPSNRTNNQLTAQHQDPR 1266


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = -3

Query: 462 LIQRQQQNNETKTTKIHIHEXLYAHAKHNA 373
           L+Q+QQQ  + +  + H H+  + HA+H++
Sbjct: 637 LLQQQQQQQQHQHHQAHQHQGQH-HAQHHS 665


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 244 KTTRNDEYERVNAERVNATDHERGTS 167
           + T +DE E ++  R N+T   R +S
Sbjct: 257 RLTEDDEDENISVTRTNSTIRSRSSS 282


>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 337 KIFIITSNLSGARVMFSVRVEXLVY 411
           K+FIIT+ +SG     S  +  L+Y
Sbjct: 308 KLFIITTYISGILYYLSTCINPLLY 332


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,848
Number of Sequences: 2352
Number of extensions: 7971
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46091631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)