Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30294
         (753 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    27   0.82 
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          25   2.5  
AY146731-1|AAO12091.1|  150|Anopheles gambiae odorant-binding pr...    25   3.3  
AF437887-1|AAL84182.1|  150|Anopheles gambiae odorant binding pr...    25   3.3  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   4.4  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   4.4  

>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 26.6 bits (56), Expect = 0.82
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +2

Query: 380 IGRHAHADQYKATDFVVPGAGTLEIIFKPESGEAIKHVVHEYKVQV*HW 526
           +GR  +AD+Y A D+ +  AG   ++   E    +KH+VH    Q   W
Sbjct: 500 LGRPTYADRYDANDYHL-HAGRNAMV--KEFAAKLKHLVHSRLQQANGW 545


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -2

Query: 449 QEYQHLGQQSQLLCIDQHEHDVQ**WV-CPTLLQVS 345
           +E + +   ++++C+DQH   +   W+ C TL  +S
Sbjct: 293 EEMRKVRLAARVVCVDQHRPSIPSRWIACDTLHAIS 328


>AY146731-1|AAO12091.1|  150|Anopheles gambiae odorant-binding
           protein AgamOBP4 protein.
          Length = 150

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -3

Query: 106 SMSKKGRISFSLIRSQIILVISSPRMST 23
           +M+KKG ISFS   +QI  ++  P M T
Sbjct: 83  TMTKKGEISFSKTMAQIEAML-PPEMKT 109


>AF437887-1|AAL84182.1|  150|Anopheles gambiae odorant binding
           protein protein.
          Length = 150

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -3

Query: 106 SMSKKGRISFSLIRSQIILVISSPRMST 23
           +M+KKG ISFS   +QI  ++  P M T
Sbjct: 83  TMTKKGEISFSKTMAQIEAML-PPEMKT 109


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 427  NKVSCFVLISMSMTSNDDGFV 365
            ++V+C  L+SM+M  N DG V
Sbjct: 1485 HRVACKRLVSMNMPLNSDGTV 1505


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
 Frame = -3

Query: 730 CVHTRYQHPQTVSCTPCHKYLERC--L*NDH 644
           C    Y + +T  C PCH+    C  L +DH
Sbjct: 672 CPQDFYANEETRICLPCHQECRGCHGLGDDH 702


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 786,353
Number of Sequences: 2352
Number of extensions: 15688
Number of successful extensions: 41
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)