Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30294
         (753 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68343-3|CAA92778.1|  412|Caenorhabditis elegans Hypothetical pr...   138   3e-33
Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical pr...   123   2e-28
U41540-8|AAW30667.1|  571|Caenorhabditis elegans Hypothetical pr...    30   2.0  
U41540-7|AAM54182.1|  930|Caenorhabditis elegans Hypothetical pr...    30   2.0  
U41540-6|AAM54183.1|  934|Caenorhabditis elegans Hypothetical pr...    30   2.0  
X75331-1|CAA53080.1|  620|Caenorhabditis elegans acetylcholinest...    29   4.7  
U58731-1|AAB00593.1|  620|Caenorhabditis elegans Abnormal acetyl...    29   4.7  

>Z68343-3|CAA92778.1|  412|Caenorhabditis elegans Hypothetical
           protein F59B8.2 protein.
          Length = 412

 Score =  138 bits (335), Expect = 3e-33
 Identities = 63/94 (67%), Positives = 77/94 (81%)
 Frame = +3

Query: 3   KIKAGPVVDILGDEMTRIIWDLIKEKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAEA 182
           KI+ G +V++ GDEMTRIIWDLIKEKLILP++D+ +H +DLG+E+RD TDDQVTID A A
Sbjct: 5   KIQGGDIVEMQGDEMTRIIWDLIKEKLILPYVDLNVHFFDLGIEHRDATDDQVTIDAANA 64

Query: 183 IKKYNVGIKCATITPDEKRVEEFK*RKCGKALMG 284
             KYNV +KCATITPDE RVEEFK +K  K+  G
Sbjct: 65  TLKYNVAVKCATITPDEARVEEFKLKKMWKSPNG 98



 Score =  136 bits (330), Expect = 1e-32
 Identities = 64/86 (74%), Positives = 70/86 (81%), Gaps = 1/86 (1%)
 Frame = +2

Query: 254 MKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWDKPIIIGRHAHADQYKATDFVVP 433
           +KKMWKSPNGTIRNILGGTVFRE II KN+PRLV  W KPIIIGRHAHADQYKATDFVVP
Sbjct: 89  LKKMWKSPNGTIRNILGGTVFREPIIVKNVPRLVNTWSKPIIIGRHAHADQYKATDFVVP 148

Query: 434 GAGTLEIIFKPESG-EAIKHVVHEYK 508
           GAG LEI F    G + I+  V ++K
Sbjct: 149 GAGKLEIKFVSADGTQTIQETVFDFK 174



 Score =  130 bits (313), Expect = 1e-30
 Identities = 59/79 (74%), Positives = 70/79 (88%)
 Frame = +1

Query: 505 QGAGVALAMFNTDASIIDFAHSSFKFALDRKYPLYLSTKNTILKKYDGRFKDIFQDIYDR 684
           +G GV+L+M+NTD SI DFAH+SFK+AL RK+PLYLSTKNTILKKYDGRFKDIF +IY  
Sbjct: 174 KGPGVSLSMYNTDDSIRDFAHASFKYALQRKFPLYLSTKNTILKKYDGRFKDIFAEIYP- 232

Query: 685 EYKKQFEDAGIWYEHRLID 741
           EY+ +F+ AGIWYEHRLID
Sbjct: 233 EYEAEFKAAGIWYEHRLID 251


>Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical
           protein C34F6.8 protein.
          Length = 435

 Score =  123 bits (296), Expect = 2e-28
 Identities = 53/85 (62%), Positives = 63/85 (74%)
 Frame = +2

Query: 254 MKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWDKPIIIGRHAHADQYKATDFVVP 433
           +KKMW SPNGTIRNILGGTVFRE I+CKNIPRLV GW +PI IGRHA  DQYK TD V+P
Sbjct: 111 LKKMWLSPNGTIRNILGGTVFREPILCKNIPRLVPGWTQPITIGRHAFGDQYKCTDLVIP 170

Query: 434 GAGTLEIIFKPESGEAIKHVVHEYK 508
              TL+++     G    H V+++K
Sbjct: 171 SGSTLQLLVNKPDGSKDVHNVYDFK 195



 Score =  123 bits (296), Expect = 2e-28
 Identities = 54/79 (68%), Positives = 67/79 (84%)
 Frame = +1

Query: 505 QGAGVALAMFNTDASIIDFAHSSFKFALDRKYPLYLSTKNTILKKYDGRFKDIFQDIYDR 684
           +  GV LAM+NTD SI  FAHS F++AL +++PLYLSTKNTILKKYDGRFKDIFQDIY++
Sbjct: 196 KSGGVGLAMYNTDESIKGFAHSCFQYALMKQWPLYLSTKNTILKKYDGRFKDIFQDIYEK 255

Query: 685 EYKKQFEDAGIWYEHRLID 741
           +Y+  F++  IWYEHRLID
Sbjct: 256 KYEADFKNNKIWYEHRLID 274



 Score =  122 bits (295), Expect = 2e-28
 Identities = 58/88 (65%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
 Frame = +3

Query: 3   KIKA-GPVVDILGDEMTRIIWDLIKEKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAE 179
           KIK   PVVD+ GDEMTRIIW  IK KLILP+LD+++  YDLG+E RD+T+DQVTID A 
Sbjct: 26  KIKVDNPVVDLDGDEMTRIIWKEIKNKLILPYLDLDIKYYDLGLEYRDETNDQVTIDAAH 85

Query: 180 AIKKYNVGIKCATITPDEKRVEEFK*RK 263
           AI +++VGIKCATITPDE R++EF  +K
Sbjct: 86  AILEHSVGIKCATITPDEARIKEFNLKK 113


>U41540-8|AAW30667.1|  571|Caenorhabditis elegans Hypothetical
           protein F35H12.2c protein.
          Length = 571

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +1

Query: 538 TDASIIDFAHSS--FKFALDRKYPLYLSTKNTILKKYDGRFKDIFQDIYDREYKK 696
           TD   +DF  +   F+ +L RKY    STK  I K    R      ++Y+ EYK+
Sbjct: 266 TDLLQLDFEGTLKYFRVSLPRKYRTEASTKCLIHKAVKFRLNHSKLEVYENEYKR 320


>U41540-7|AAM54182.1|  930|Caenorhabditis elegans Hypothetical
           protein F35H12.2a protein.
          Length = 930

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +1

Query: 538 TDASIIDFAHSS--FKFALDRKYPLYLSTKNTILKKYDGRFKDIFQDIYDREYKK 696
           TD   +DF  +   F+ +L RKY    STK  I K    R      ++Y+ EYK+
Sbjct: 625 TDLLQLDFEGTLKYFRVSLPRKYRTEASTKCLIHKAVKFRLNHSKLEVYENEYKR 679


>U41540-6|AAM54183.1|  934|Caenorhabditis elegans Hypothetical
           protein F35H12.2b protein.
          Length = 934

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +1

Query: 538 TDASIIDFAHSS--FKFALDRKYPLYLSTKNTILKKYDGRFKDIFQDIYDREYKK 696
           TD   +DF  +   F+ +L RKY    STK  I K    R      ++Y+ EYK+
Sbjct: 629 TDLLQLDFEGTLKYFRVSLPRKYRTEASTKCLIHKAVKFRLNHSKLEVYENEYKR 683


>X75331-1|CAA53080.1|  620|Caenorhabditis elegans
           acetylcholinesterase protein.
          Length = 620

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = -1

Query: 186 LWPQHNQL*LDHQSYH-DFPYPSRRHVIQCPRKEESAF 76
           +WP++N + +++ +   +  YPS + +   PR++E AF
Sbjct: 523 VWPKYNSVSMEYMNMTVESSYPSMKRIGHGPRRKECAF 560


>U58731-1|AAB00593.1|  620|Caenorhabditis elegans Abnormal
           acetylcholinesterase protein1 protein.
          Length = 620

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = -1

Query: 186 LWPQHNQL*LDHQSYH-DFPYPSRRHVIQCPRKEESAF 76
           +WP++N + +++ +   +  YPS + +   PR++E AF
Sbjct: 523 VWPKYNSVSMEYMNMTVESSYPSMKRIGHGPRRKECAF 560


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,182,511
Number of Sequences: 27780
Number of extensions: 362650
Number of successful extensions: 1033
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1032
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)