Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30293
         (726 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX641037-1|CAE46023.1|  441|Homo sapiens hypothetical protein pr...    31   3.2  
BC107570-1|AAI07571.1|  520|Homo sapiens BAZ2B protein protein.        31   3.2  
BC012576-1|AAH12576.1|  643|Homo sapiens BAZ2B protein protein.        31   3.2  
AB040909-1|BAA96000.2| 2142|Homo sapiens KIAA1476 protein protein.     31   3.2  
AB032255-1|BAA89212.1| 1972|Homo sapiens bromodomain adjacent to...    31   3.2  
M85234-1|AAA36569.1|  322|Homo sapiens nuclease sensitive elemen...    30   7.3  
M83234-1|AAA59949.1|  320|Homo sapiens DNA-binding protein protein.    30   7.3  

>BX641037-1|CAE46023.1|  441|Homo sapiens hypothetical protein
           protein.
          Length = 441

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 16/58 (27%), Positives = 31/58 (53%)
 Frame = +2

Query: 284 DARFETLVVKQTKQSVLEEARARANDSGLESDFIQDGVHIGNGDNSPTVEDGTQQDET 457
           DAR + +  K+ ++  +E +    +DSG  SD   +G  I + D+    ED  ++D++
Sbjct: 221 DARVDKIKDKKPRKKAMESSSNSDSDSGTSSDTSSEG--ISSSDSDDLEEDEEEEDQS 276


>BC107570-1|AAI07571.1|  520|Homo sapiens BAZ2B protein protein.
          Length = 520

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 16/58 (27%), Positives = 31/58 (53%)
 Frame = +2

Query: 284 DARFETLVVKQTKQSVLEEARARANDSGLESDFIQDGVHIGNGDNSPTVEDGTQQDET 457
           DAR + +  K+ ++  +E +    +DSG  SD   +G  I + D+    ED  ++D++
Sbjct: 160 DARVDKIKDKKPRKKAMESSSNSDSDSGTSSDTSSEG--ISSSDSDDLEEDEEEEDQS 215


>BC012576-1|AAH12576.1|  643|Homo sapiens BAZ2B protein protein.
          Length = 643

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 16/58 (27%), Positives = 31/58 (53%)
 Frame = +2

Query: 284 DARFETLVVKQTKQSVLEEARARANDSGLESDFIQDGVHIGNGDNSPTVEDGTQQDET 457
           DAR + +  K+ ++  +E +    +DSG  SD   +G  I + D+    ED  ++D++
Sbjct: 27  DARVDKIKDKKPRKKAMESSSNSDSDSGTSSDTSSEG--ISSSDSDDLEEDEEEEDQS 82


>AB040909-1|BAA96000.2| 2142|Homo sapiens KIAA1476 protein protein.
          Length = 2142

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 16/58 (27%), Positives = 31/58 (53%)
 Frame = +2

Query: 284 DARFETLVVKQTKQSVLEEARARANDSGLESDFIQDGVHIGNGDNSPTVEDGTQQDET 457
           DAR + +  K+ ++  +E +    +DSG  SD   +G  I + D+    ED  ++D++
Sbjct: 231 DARVDKIKDKKPRKKAMESSSNSDSDSGTSSDTSSEG--ISSSDSDDLEEDEEEEDQS 286


>AB032255-1|BAA89212.1| 1972|Homo sapiens bromodomain adjacent to
           zinc finger domain 2B protein.
          Length = 1972

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 16/58 (27%), Positives = 31/58 (53%)
 Frame = +2

Query: 284 DARFETLVVKQTKQSVLEEARARANDSGLESDFIQDGVHIGNGDNSPTVEDGTQQDET 457
           DAR + +  K+ ++  +E +    +DSG  SD   +G  I + D+    ED  ++D++
Sbjct: 27  DARVDKIKDKKPRKKAMESSSNSDSDSGTSSDTSSEG--ISSSDSDDLEEDEEEEDQS 82


>M85234-1|AAA36569.1|  322|Homo sapiens nuclease sensitive element
           binding protein-1 protein.
          Length = 322

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 164 EEDKEYNGSRSSPEEPRNVRHQEILQYRERYP 259
           EEDKE  G  +  ++P   R++    YR R P
Sbjct: 259 EEDKENQGDETQGQQPPQARYRRNFNYRRRRP 290


>M83234-1|AAA59949.1|  320|Homo sapiens DNA-binding protein protein.
          Length = 320

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 164 EEDKEYNGSRSSPEEPRNVRHQEILQYRERYP 259
           EEDKE  G  +  ++P   R++    YR R P
Sbjct: 257 EEDKENQGDETQGQQPPQARYRRNFNYRRRRP 288


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,577,030
Number of Sequences: 237096
Number of extensions: 2212514
Number of successful extensions: 5304
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5296
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)