Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30293
         (726 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z29094-14|CAJ43434.1|  893|Caenorhabditis elegans Hypothetical p...    33   0.27 
Z29094-10|CAD45580.2|  965|Caenorhabditis elegans Hypothetical p...    33   0.27 
Z29094-9|CAA82347.3|  960|Caenorhabditis elegans Hypothetical pr...    33   0.27 
AY450852-1|AAR18092.1|  960|Caenorhabditis elegans Tousled-like ...    33   0.27 
U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical pr...    29   2.6  
U80814-2|AAB37993.1|  335|Caenorhabditis elegans Serpentine rece...    29   4.5  
U23510-10|AAC46780.1|  979|Caenorhabditis elegans Hypothetical p...    29   4.5  
AF025457-10|AAB70972.1|  148|Caenorhabditis elegans Hypothetical...    29   4.5  
Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z32683-1|CAA83621.1|  812|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.      28   7.8  
U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein...    28   7.8  
U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein...    28   7.8  

>Z29094-14|CAJ43434.1|  893|Caenorhabditis elegans Hypothetical
           protein C07A9.3c protein.
          Length = 893

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = +2

Query: 200 PEEPRNVRHQEILQYRERYPSRRRSL---VDDARFETLVVKQTKQSVLEEARARANDS 364
           PEEP+ +++QE ++  E Y  RR  L     D   E   +++ KQ  + E +  +N+S
Sbjct: 513 PEEPKEIQYQEYIELDEIYKLRREHLRKEETDLSMEKERLEKEKQHHVRELKRASNES 570


>Z29094-10|CAD45580.2|  965|Caenorhabditis elegans Hypothetical
           protein C07A9.3b protein.
          Length = 965

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = +2

Query: 200 PEEPRNVRHQEILQYRERYPSRRRSL---VDDARFETLVVKQTKQSVLEEARARANDS 364
           PEEP+ +++QE ++  E Y  RR  L     D   E   +++ KQ  + E +  +N+S
Sbjct: 580 PEEPKEIQYQEYIELDEIYKLRREHLRKEETDLSMEKERLEKEKQHHVRELKRASNES 637


>Z29094-9|CAA82347.3|  960|Caenorhabditis elegans Hypothetical
           protein C07A9.3a protein.
          Length = 960

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = +2

Query: 200 PEEPRNVRHQEILQYRERYPSRRRSL---VDDARFETLVVKQTKQSVLEEARARANDS 364
           PEEP+ +++QE ++  E Y  RR  L     D   E   +++ KQ  + E +  +N+S
Sbjct: 580 PEEPKEIQYQEYIELDEIYKLRREHLRKEETDLSMEKERLEKEKQHHVRELKRASNES 637


>AY450852-1|AAR18092.1|  960|Caenorhabditis elegans Tousled-like
           kinase protein.
          Length = 960

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = +2

Query: 200 PEEPRNVRHQEILQYRERYPSRRRSL---VDDARFETLVVKQTKQSVLEEARARANDS 364
           PEEP+ +++QE ++  E Y  RR  L     D   E   +++ KQ  + E +  +N+S
Sbjct: 580 PEEPKEIQYQEYIELDEIYKLRREHLRKEETDLSMEKERLEKEKQHHVRELKRASNES 637


>U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical
           protein T04G9.1 protein.
          Length = 1610

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 19/95 (20%), Positives = 43/95 (45%)
 Frame = +2

Query: 185 GSRSSPEEPRNVRHQEILQYRERYPSRRRSLVDDARFETLVVKQTKQSVLEEARARANDS 364
           G+RS+P+ P+ ++ +E      R   R++ LV D  +++  +    Q    +    +   
Sbjct: 459 GARSTPDTPKQLKPEEPASETPRKRQRKQILVSDHHYQSSHLYSLLQDDPVKHEPPSEKE 518

Query: 365 GLESDFIQDGVHIGNGDNSPTVEDGTQQDETKNGH 469
             +S    + VH  + +N+   ED  + +  ++ H
Sbjct: 519 EEQSRSSSNIVHSASQENTKFDEDIVKVEAPEHNH 553


>U80814-2|AAB37993.1|  335|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 8 protein.
          Length = 335

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
 Frame = -3

Query: 415 ITVTNMHSILDEIRFQARVIGSGASLF--KYALLGLF-DYQCFE--AGVINQGTTARWVP 251
           IT+TN+   +     Q R+I SG SLF   Y    LF +  CF+     ++  T A W+ 
Sbjct: 48  ITLTNIGVCITGFLLQERIIQSGKSLFYVSYGYCSLFGERLCFDIFGAYLHFHTHALWLL 107

Query: 250 F 248
           F
Sbjct: 108 F 108


>U23510-10|AAC46780.1|  979|Caenorhabditis elegans Hypothetical
           protein R12C12.1a protein.
          Length = 979

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/72 (23%), Positives = 32/72 (44%)
 Frame = +2

Query: 179 YNGSRSSPEEPRNVRHQEILQYRERYPSRRRSLVDDARFETLVVKQTKQSVLEEARARAN 358
           Y+G +   E  R V H+          +    +V    F+TL ++   ++ LEE + RA 
Sbjct: 370 YHGPQRLTEIARGV-HKSTAYLAYHLRNAGHEIVHKDYFDTLKIRLKDKAALEETKKRAE 428

Query: 359 DSGLESDFIQDG 394
           +  +   + +DG
Sbjct: 429 EMKMNFRYYEDG 440


>AF025457-10|AAB70972.1|  148|Caenorhabditis elegans Hypothetical
           protein C08E3.11 protein.
          Length = 148

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -2

Query: 221 EHFAVLLGCCDCHCTLYLLLRTH 153
           E +  LLGCC C    YL L TH
Sbjct: 85  ECYEPLLGCCVCWIIFYLPLNTH 107


>Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical protein
            ZK662.4 protein.
          Length = 1440

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +2

Query: 182  NGSRSSPEEPRNVRHQEILQYRERYPSRRRSLVDDARFETLVVKQTKQSVLE 337
            N  R +P E + +  Q+   YRE  P   R+ VD+      + +Q ++ VLE
Sbjct: 1054 NHLRETPAELKKLG-QQYFDYREPEPEPERNDVDEQEIIPKLFRQPRKQVLE 1104


>Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical protein
            ZK662.4 protein.
          Length = 1440

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +2

Query: 182  NGSRSSPEEPRNVRHQEILQYRERYPSRRRSLVDDARFETLVVKQTKQSVLE 337
            N  R +P E + +  Q+   YRE  P   R+ VD+      + +Q ++ VLE
Sbjct: 1054 NHLRETPAELKKLG-QQYFDYREPEPEPERNDVDEQEIIPKLFRQPRKQVLE 1104


>Z32683-1|CAA83621.1|  812|Caenorhabditis elegans Hypothetical
           protein R07E5.1 protein.
          Length = 812

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 21/67 (31%), Positives = 26/67 (38%)
 Frame = +2

Query: 188 SRSSPEEPRNVRHQEILQYRERYPSRRRSLVDDARFETLVVKQTKQSVLEEARARANDSG 367
           S S  EE      QEIL+ RE    RRR +V+    E     + +   LE          
Sbjct: 660 SNSEDEEAEEKERQEILKKREEDLKRRREIVEKKEEENRKRVEKELKELENRDLLRVSKQ 719

Query: 368 LESDFIQ 388
            E D IQ
Sbjct: 720 QEDDDIQ 726


>Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.
          Length = 1440

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +2

Query: 182  NGSRSSPEEPRNVRHQEILQYRERYPSRRRSLVDDARFETLVVKQTKQSVLE 337
            N  R +P E + +  Q+   YRE  P   R+ VD+      + +Q ++ VLE
Sbjct: 1054 NHLRETPAELKKLG-QQYFDYREPEPEPERNDVDEQEIIPKLFRQPRKQVLE 1104


>U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein
            protein.
          Length = 1440

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +2

Query: 182  NGSRSSPEEPRNVRHQEILQYRERYPSRRRSLVDDARFETLVVKQTKQSVLE 337
            N  R +P E + +  Q+   YRE  P   R+ VD+      + +Q ++ VLE
Sbjct: 1054 NHLRETPAELKKLG-QQYFDYREPEPEPERNDVDEQEIIPKLFRQPRKQVLE 1104


>U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein
            protein.
          Length = 1440

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +2

Query: 182  NGSRSSPEEPRNVRHQEILQYRERYPSRRRSLVDDARFETLVVKQTKQSVLE 337
            N  R +P E + +  Q+   YRE  P   R+ VD+      + +Q ++ VLE
Sbjct: 1054 NHLRETPAELKKLG-QQYFDYREPEPEPERNDVDEQEIIPKLFRQPRKQVLE 1104


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,185,139
Number of Sequences: 27780
Number of extensions: 328557
Number of successful extensions: 995
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)