Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30292
(756 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 3.1
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 3.1
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 21 9.4
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 21 9.4
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 21 9.4
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 21 9.4
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 21 9.4
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 21 9.4
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 21 9.4
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 9.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 9.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 9.4
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 9.4
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 9.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 9.4
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 9.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 9.4
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 674 SILAAPPFKPKRITASR*K*AGRGNTYTCGLTRG 573
+++ P P TA R G T TC +TRG
Sbjct: 606 AVIVPPKISP--FTADRDLHLGERTTLTCSVTRG 637
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = -3
Query: 478 PVRLDNVKSLNPFLDDKLTVAINKIVGIIILC 383
P R DN+ N ++D +A + +I++C
Sbjct: 799 PTREDNLLVCNSYVDASYMIAFAYPIMLIVVC 830
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 9.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 625 GRNRQGAVIPTHADSQEVLPPVKIYINIF 539
GR+R+ +IP+H Q PV +Y F
Sbjct: 74 GRSREHRIIPSHYIEQ---IPVPVYYGNF 99
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 9.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 625 GRNRQGAVIPTHADSQEVLPPVKIYINIF 539
GR+R+ +IP+H Q PV +Y F
Sbjct: 74 GRSREHRIIPSHYIEQ---IPVPVYYGNF 99
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 9.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 625 GRNRQGAVIPTHADSQEVLPPVKIYINIF 539
GR+R+ +IP+H Q PV +Y F
Sbjct: 74 GRSREHRIIPSHYIEQ---IPVPVYYGNF 99
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 9.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 625 GRNRQGAVIPTHADSQEVLPPVKIYINIF 539
GR+R+ +IP+H Q PV +Y F
Sbjct: 74 GRSREHRIIPSHYIEQ---IPVPVYYGNF 99
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 9.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 625 GRNRQGAVIPTHADSQEVLPPVKIYINIF 539
GR+R+ +IP+H Q PV +Y F
Sbjct: 74 GRSREHRIIPSHYIEQ---IPVPVYYGNF 99
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 9.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 625 GRNRQGAVIPTHADSQEVLPPVKIYINIF 539
GR+R+ +IP+H Q PV +Y F
Sbjct: 74 GRSREHRIIPSHYIEQ---IPVPVYYGNF 99
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 9.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 625 GRNRQGAVIPTHADSQEVLPPVKIYINIF 539
GR+R+ +IP+H Q PV +Y F
Sbjct: 74 GRSREHRIIPSHYIEQ---IPVPVYYGNF 99
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 625 GRNRQGAVIPTHADSQEVLPPVKIYINIF 539
GR+R+ +IP+H Q PV +Y F
Sbjct: 323 GRSREHRIIPSHYIEQ---IPVPVYYGNF 348
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 625 GRNRQGAVIPTHADSQEVLPPVKIYINIF 539
GR+R+ +IP+H Q PV +Y F
Sbjct: 323 GRSREHRIIPSHYIEQ---IPVPVYYGNF 348
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 625 GRNRQGAVIPTHADSQEVLPPVKIYINIF 539
GR+R+ +IP+H Q PV +Y F
Sbjct: 323 GRSREHRIIPSHYIEQ---IPVPVYYGNF 348
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 625 GRNRQGAVIPTHADSQEVLPPVKIYINIF 539
GR+R+ +IP+H Q PV +Y F
Sbjct: 323 GRSREHRIIPSHYIEQ---IPVPVYYGNF 348
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 625 GRNRQGAVIPTHADSQEVLPPVKIYINIF 539
GR+R+ +IP+H Q PV +Y F
Sbjct: 323 GRSREHRIIPSHYIEQ---IPVPVYYGNF 348
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 625 GRNRQGAVIPTHADSQEVLPPVKIYINIF 539
GR+R+ +IP+H Q PV +Y F
Sbjct: 323 GRSREHRIIPSHYIEQ---IPVPVYYGNF 348
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.4 bits (43), Expect = 9.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 625 GRNRQGAVIPTHADSQEVLPPVKIYINIF 539
GR+R+ +IP+H Q PV +Y F
Sbjct: 307 GRSREHRIIPSHYIEQ---IPVPVYYGNF 332
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 9.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 625 GRNRQGAVIPTHADSQEVLPPVKIYINIF 539
GR+R+ +IP+H Q PV +Y F
Sbjct: 323 GRSREHRIIPSHYIEQ---IPVPVYYGNF 348
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,463
Number of Sequences: 438
Number of extensions: 4442
Number of successful extensions: 18
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -