Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30291
         (718 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   2.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   4.3  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    22   5.7  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   7.6  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 8   GPGRRVAAEASIWRLLELMLR 70
           GP  +VA   S+W LL  ++R
Sbjct: 258 GPSSQVADYRSLWMLLSKLIR 278


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 11/35 (31%), Positives = 13/35 (37%)
 Frame = -1

Query: 607 SGSPGFGCDWCLTAAYRTAMVEAPRQLVRHVGHMR 503
           +G   F C+W       T   E  R L  H G  R
Sbjct: 340 TGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKR 374


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
          transcription factor protein.
          Length = 249

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 66 SISSNNLQIEASAATRRPGPER 1
          +I + N QIE +AAT+R    R
Sbjct: 14 AIPTTNNQIEMAAATKRVSDNR 35


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = -1

Query: 472 SLSLFAFTYVPSF 434
           S+S+F+F ++PSF
Sbjct: 213 SISVFSFFFMPSF 225


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,677
Number of Sequences: 336
Number of extensions: 3708
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)