Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30290
(750 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6VYI5 Cluster: TARDBP S8; n=8; Coelomata|Rep: TARDBP S... 80 7e-14
UniRef50_Q05C33 Cluster: Tardbp protein; n=14; Coelomata|Rep: Ta... 80 7e-14
UniRef50_Q13148 Cluster: TAR DNA-binding protein 43; n=36; Coelo... 78 3e-13
UniRef50_Q5BXS3 Cluster: SJCHGC01369 protein; n=2; Schistosoma j... 73 8e-12
UniRef50_Q4RX96 Cluster: Chromosome 11 SCAF14979, whole genome s... 71 3e-11
UniRef50_Q4H2Q6 Cluster: Ci-Tardbp protein; n=1; Ciona intestina... 63 6e-09
UniRef50_A4GUK6 Cluster: TDP43 splice variant 2; n=1; Homo sapie... 55 2e-06
UniRef50_UPI0000EB05D2 Cluster: TAR DNA-binding protein 43 (TDP-... 53 9e-06
UniRef50_Q20414 Cluster: Putative uncharacterized protein tag-16... 50 6e-05
UniRef50_UPI0000D639AF Cluster: UPI0000D639AF related cluster; n... 50 8e-05
UniRef50_UPI0000E47947 Cluster: PREDICTED: similar to GA10247-PA... 49 1e-04
UniRef50_A7RU25 Cluster: Predicted protein; n=1; Nematostella ve... 44 0.005
UniRef50_O94432 Cluster: mRNA cleavage factor complex subunit; n... 41 0.028
UniRef50_Q7XDI5 Cluster: RNA recognition motif family protein, e... 41 0.037
UniRef50_Q9HEH4 Cluster: Related to heterogeneous nuclear ribonu... 41 0.037
UniRef50_UPI000023D975 Cluster: hypothetical protein FG10273.1; ... 40 0.065
UniRef50_Q4WHA5 Cluster: Heterogeneous nuclear ribonucleoprotein... 40 0.065
UniRef50_Q5ZAN1 Cluster: Putative uncharacterized protein OSJNBb... 40 0.086
UniRef50_A7SCX6 Cluster: Predicted protein; n=1; Nematostella ve... 40 0.086
UniRef50_Q4PBU3 Cluster: Putative uncharacterized protein; n=1; ... 39 0.11
UniRef50_Q5ZAN0 Cluster: Putative uncharacterized protein OSJNBb... 39 0.15
UniRef50_Q08473 Cluster: RNA-binding protein squid; n=22; Endopt... 39 0.15
UniRef50_O43347 Cluster: RNA-binding protein Musashi homolog 1; ... 39 0.15
UniRef50_A7QJZ9 Cluster: Chromosome undetermined scaffold_109, w... 38 0.20
UniRef50_Q5CRM8 Cluster: T8M16_190-plant like protein with RRM d... 38 0.20
UniRef50_Q4S8N9 Cluster: Chromosome 7 SCAF14703, whole genome sh... 38 0.26
UniRef50_Q8CD63 Cluster: 13 days embryo male testis cDNA, RIKEN ... 38 0.26
UniRef50_Q32LZ4 Cluster: Msi2h protein; n=4; Eutheria|Rep: Msi2h... 38 0.26
UniRef50_Q22037 Cluster: Heterogeneous nuclear ribonucleoprotein... 38 0.26
UniRef50_Q94AC3 Cluster: AT4g36960/C7A10_400; n=11; Magnoliophyt... 38 0.35
UniRef50_Q5N7W0 Cluster: Pentatricopeptide (PPR) repeat-containi... 38 0.35
UniRef50_O23189 Cluster: RNA-binding like protein; n=1; Arabidop... 38 0.35
UniRef50_Q4UI71 Cluster: RNA-binding (SR) protein, putative; n=2... 38 0.35
UniRef50_Q6CC04 Cluster: Yarrowia lipolytica chromosome C of str... 38 0.35
UniRef50_UPI0000F1F0C3 Cluster: PREDICTED: similar to LOC561459 ... 37 0.46
UniRef50_Q4SEZ3 Cluster: Chromosome 1 SCAF14609, whole genome sh... 37 0.46
UniRef50_Q9FX45 Cluster: RNA-binding glycine-rich protein, putat... 37 0.46
UniRef50_Q8W555 Cluster: AT3g07810/F17A17_15; n=11; Magnoliophyt... 37 0.46
UniRef50_A2YHR7 Cluster: Putative uncharacterized protein; n=2; ... 37 0.46
UniRef50_A4V6N1 Cluster: HnRNP A2/B1 protein; n=1; Dugesia japon... 37 0.46
UniRef50_UPI0000499D3C Cluster: RNA-binding protein; n=1; Entamo... 37 0.61
UniRef50_Q9FIU6 Cluster: Similarity to RNA-binding protein; n=4;... 37 0.61
UniRef50_Q9VVE5 Cluster: CG32169-PA; n=9; Endopterygota|Rep: CG3... 37 0.61
UniRef50_Q6PNM9 Cluster: AUF1 similar protein; n=3; Paracentrotu... 37 0.61
UniRef50_Q21911 Cluster: Putative uncharacterized protein msi-1;... 37 0.61
UniRef50_A7RG33 Cluster: Predicted protein; n=1; Nematostella ve... 37 0.61
UniRef50_Q96EP5 Cluster: DAZ-associated protein 1; n=39; Euteleo... 37 0.61
UniRef50_Q9C5A7 Cluster: Putative uncharacterized protein At5g08... 36 0.81
UniRef50_Q501B0 Cluster: At2g46780; n=3; core eudicotyledons|Rep... 36 0.81
UniRef50_Q5WRT9 Cluster: Putative uncharacterized protein; n=4; ... 36 0.81
UniRef50_Q4E5H3 Cluster: RNA-binding protein, putative; n=1; Try... 36 0.81
UniRef50_A2DHF2 Cluster: Putative uncharacterized protein; n=2; ... 36 0.81
UniRef50_Q6CG61 Cluster: Similar to sp|P31209 Schizosaccharomyce... 36 0.81
UniRef50_Q9SU99 Cluster: HnRNP-like protein; n=10; core eudicoty... 36 1.1
UniRef50_Q259G3 Cluster: H0124B04.13 protein; n=5; Oryza sativa|... 36 1.1
UniRef50_Q9VU18 Cluster: CG10948-PC, isoform C; n=6; Sophophora|... 36 1.1
UniRef50_Q4QHE5 Cluster: Putative uncharacterized protein; n=3; ... 36 1.1
UniRef50_A7SIF0 Cluster: Predicted protein; n=1; Nematostella ve... 36 1.1
UniRef50_Q9LNP1 Cluster: F1L3.34; n=2; Arabidopsis thaliana|Rep:... 36 1.4
UniRef50_Q75KB4 Cluster: Putative RNA binding protein; n=4; Oryz... 36 1.4
UniRef50_Q1ENZ5 Cluster: RNA-binding protein, putative; n=2; Mag... 36 1.4
UniRef50_A2YR27 Cluster: Putative uncharacterized protein; n=3; ... 36 1.4
UniRef50_A4RNA8 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_Q9FI04 Cluster: Arabidopsis thaliana genomic DNA, chrom... 35 1.9
UniRef50_Q0ITI7 Cluster: Os11g0250000 protein; n=5; Oryza sativa... 35 1.9
UniRef50_Q5CS11 Cluster: Musashi. RRM domain containing protein,... 35 1.9
UniRef50_Q57XH6 Cluster: RNA-binding protein, putative; n=1; Try... 35 1.9
UniRef50_Q14103 Cluster: Heterogeneous nuclear ribonucleoprotein... 35 1.9
UniRef50_UPI0000E476D6 Cluster: PREDICTED: hypothetical protein;... 35 2.5
UniRef50_Q9LHL2 Cluster: Similarity to RNA binding protein; n=13... 35 2.5
UniRef50_Q8W4A6 Cluster: Putative uncharacterized protein MJH23.... 35 2.5
UniRef50_Q8LEE2 Cluster: Glycine-rich RNA-binding protein-like; ... 35 2.5
UniRef50_Q5JK61 Cluster: RNA recognition motif (RRM)-containing ... 35 2.5
UniRef50_Q5BRN0 Cluster: SJCHGC07795 protein; n=1; Schistosoma j... 35 2.5
UniRef50_A4V6K1 Cluster: DAZ-associated protein; n=2; Platyhelmi... 35 2.5
UniRef50_A2GMP0 Cluster: Putative uncharacterized protein; n=2; ... 35 2.5
UniRef50_A2EGD1 Cluster: Putative uncharacterized protein; n=2; ... 35 2.5
UniRef50_O14979 Cluster: Heterogeneous nuclear ribonucleoprotein... 35 2.5
UniRef50_UPI00015560CE Cluster: PREDICTED: similar to heterogene... 34 3.3
UniRef50_UPI0000E4626F Cluster: PREDICTED: similar to heterogene... 34 3.3
UniRef50_Q8LPB0 Cluster: Glycine-rich RNA-binding protein; n=1; ... 34 3.3
UniRef50_Q3ED69 Cluster: Uncharacterized protein At1g22910.3; n=... 34 3.3
UniRef50_Q1PES4 Cluster: RNA recognition motif-containing protei... 34 3.3
UniRef50_A7PX80 Cluster: Chromosome chr12 scaffold_36, whole gen... 34 3.3
UniRef50_A2XEH7 Cluster: Putative uncharacterized protein; n=1; ... 34 3.3
UniRef50_Q6X9Z2 Cluster: HnRNP core protein A1; n=2; Laurasiathe... 34 3.3
UniRef50_A6SJV1 Cluster: Putative uncharacterized protein; n=2; ... 34 3.3
UniRef50_A3LZT4 Cluster: Predicted protein; n=1; Pichia stipitis... 34 3.3
UniRef50_P09651 Cluster: Heterogeneous nuclear ribonucleoprotein... 34 3.3
UniRef50_A7MXD2 Cluster: Putative uncharacterized protein; n=1; ... 34 4.3
UniRef50_A7QXI3 Cluster: Chromosome undetermined scaffold_225, w... 34 4.3
UniRef50_A7PIB0 Cluster: Chromosome chr13 scaffold_17, whole gen... 34 4.3
UniRef50_Q6GYB0 Cluster: Splice factor; n=1; Toxoplasma gondii|R... 34 4.3
UniRef50_Q552K5 Cluster: Putative uncharacterized protein; n=1; ... 34 4.3
UniRef50_A4V6K2 Cluster: PRM10 protein; n=1; Dugesia japonica|Re... 34 4.3
UniRef50_A0CCB3 Cluster: Chromosome undetermined scaffold_167, w... 34 4.3
UniRef50_Q6BL35 Cluster: Debaryomyces hansenii chromosome F of s... 34 4.3
UniRef50_UPI00015B4D1C Cluster: PREDICTED: similar to conserved ... 33 5.7
UniRef50_UPI0000F2CBBE Cluster: PREDICTED: similar to musashi ho... 33 5.7
UniRef50_UPI0000DB6DF2 Cluster: PREDICTED: similar to squid CG16... 33 5.7
UniRef50_Q9FI08 Cluster: Similarity to RNA-binding protein; n=1;... 33 5.7
UniRef50_Q99383 Cluster: Nuclear polyadenylated RNA-binding prot... 33 5.7
UniRef50_UPI0000DB6D53 Cluster: PREDICTED: similar to CG32169-PA... 33 7.5
UniRef50_UPI00006CBFBB Cluster: probable RNA-binding protein; n=... 33 7.5
UniRef50_UPI0000211FC5 Cluster: PREDICTED: RNA binding motif pro... 33 7.5
UniRef50_Q5PPI5 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_Q5E219 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_Q3W0A8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_Q0FT73 Cluster: Putative hypothetical Gifsy-1 prophage ... 33 7.5
UniRef50_Q0C5E3 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_Q0AKQ5 Cluster: Redoxin domain protein precursor; n=1; ... 33 7.5
UniRef50_A0U7R7 Cluster: Putative uncharacterized protein; n=3; ... 33 7.5
UniRef50_Q9M9E6 Cluster: F3F9.20; n=8; Arabidopsis thaliana|Rep:... 33 7.5
UniRef50_Q40437 Cluster: RGP-3; n=2; Nicotiana|Rep: RGP-3 - Nico... 33 7.5
UniRef50_Q0DEI3 Cluster: Os06g0151100 protein; n=5; Oryza sativa... 33 7.5
UniRef50_Q8MS04 Cluster: RH49436p; n=9; Endopterygota|Rep: RH494... 33 7.5
UniRef50_Q5DH48 Cluster: SJCHGC06087 protein; n=1; Schistosoma j... 33 7.5
UniRef50_Q4DDV5 Cluster: Putative uncharacterized protein; n=2; ... 33 7.5
UniRef50_Q6FSA7 Cluster: Candida glabrata strain CBS138 chromoso... 33 7.5
UniRef50_Q4PH97 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_UPI0000E806AC Cluster: PREDICTED: hypothetical protein;... 33 9.9
UniRef50_Q4RA72 Cluster: Chromosome undetermined SCAF24356, whol... 33 9.9
UniRef50_A4B4X2 Cluster: RNA-binding protein; n=1; Alteromonas m... 33 9.9
UniRef50_Q8W034 Cluster: Ribonucleoprotein 1; n=5; core eudicoty... 33 9.9
UniRef50_A7QJF1 Cluster: Chromosome chr8 scaffold_106, whole gen... 33 9.9
UniRef50_A3AEN0 Cluster: Putative uncharacterized protein; n=1; ... 33 9.9
UniRef50_A2XBX0 Cluster: Putative uncharacterized protein; n=2; ... 33 9.9
UniRef50_A0E769 Cluster: Chromosome undetermined scaffold_80, wh... 33 9.9
UniRef50_Q9NQU3 Cluster: Putative uncharacterized protein; n=1; ... 33 9.9
UniRef50_Q2H6T1 Cluster: Putative uncharacterized protein; n=4; ... 33 9.9
UniRef50_Q1DPW0 Cluster: Putative uncharacterized protein; n=1; ... 33 9.9
UniRef50_P48809 Cluster: Heterogeneous nuclear ribonucleoprotein... 33 9.9
>UniRef50_Q6VYI5 Cluster: TARDBP S8; n=8; Coelomata|Rep: TARDBP S8 -
Mus musculus (Mouse)
Length = 302
Score = 79.8 bits (188), Expect = 7e-14
Identities = 43/108 (39%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Frame = +1
Query: 394 RCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTPPDYPK--VLASSNSPSTKLNC 567
+ SDLIVLGLPWKTTE+ ++DYFS+FG++LMVQVK+D + K T++
Sbjct: 102 KTSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKV 161
Query: 568 VH*XXXXXXXXXXXMFASXXXXXXXXXLIRKVFVGRCTENITAEDLRE 711
+ + RKVFVGRCTE++TAE+L++
Sbjct: 162 MSQRHMIDGRWCDCKLPNSKQSPDEPLRSRKVFVGRCTEDMTAEELQQ 209
Score = 70.9 bits (166), Expect = 3e-11
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGK 632
TG SKGFGF++F EYE Q++ + +RHMIDGRWCD ++PN K
Sbjct: 141 TGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSK 181
Score = 55.2 bits (127), Expect = 2e-06
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +2
Query: 140 MTEYVPVSEGEQDEPIELPTEEDGSLLLSTVAAQF 244
M+EY+ V+E E DEPIE+P+E+DG++LLSTV AQF
Sbjct: 1 MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQF 35
>UniRef50_Q05C33 Cluster: Tardbp protein; n=14; Coelomata|Rep:
Tardbp protein - Mus musculus (Mouse)
Length = 288
Score = 79.8 bits (188), Expect = 7e-14
Identities = 43/108 (39%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Frame = +1
Query: 394 RCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTPPDYPK--VLASSNSPSTKLNC 567
+ SDLIVLGLPWKTTE+ ++DYFS+FG++LMVQVK+D + K T++
Sbjct: 102 KTSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKV 161
Query: 568 VH*XXXXXXXXXXXMFASXXXXXXXXXLIRKVFVGRCTENITAEDLRE 711
+ + RKVFVGRCTE++TAE+L++
Sbjct: 162 MSQRHMIDGRWCDCKLPNSKQSPDEPLRSRKVFVGRCTEDMTAEELQQ 209
Score = 70.9 bits (166), Expect = 3e-11
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGK 632
TG SKGFGF++F EYE Q++ + +RHMIDGRWCD ++PN K
Sbjct: 141 TGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSK 181
Score = 55.2 bits (127), Expect = 2e-06
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +2
Query: 140 MTEYVPVSEGEQDEPIELPTEEDGSLLLSTVAAQF 244
M+EY+ V+E E DEPIE+P+E+DG++LLSTV AQF
Sbjct: 1 MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQF 35
>UniRef50_Q13148 Cluster: TAR DNA-binding protein 43; n=36;
Coelomata|Rep: TAR DNA-binding protein 43 - Homo sapiens
(Human)
Length = 414
Score = 77.8 bits (183), Expect = 3e-13
Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Frame = +1
Query: 394 RCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTPPDYPK--VLASSNSPSTKLNC 567
+ SDLIVLGLPWKTTE+ +++YFS+FG++LMVQVK+D + K T++
Sbjct: 102 KTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKV 161
Query: 568 VH*XXXXXXXXXXXMFASXXXXXXXXXLIRKVFVGRCTENITAEDLRE 711
+ + RKVFVGRCTE++T ++LRE
Sbjct: 162 MSQRHMIDGRWCDCKLPNSKQSQDEPLRSRKVFVGRCTEDMTEDELRE 209
Score = 70.9 bits (166), Expect = 3e-11
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGK 632
TG SKGFGF++F EYE Q++ + +RHMIDGRWCD ++PN K
Sbjct: 141 TGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSK 181
Score = 55.2 bits (127), Expect = 2e-06
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +2
Query: 140 MTEYVPVSEGEQDEPIELPTEEDGSLLLSTVAAQF 244
M+EY+ V+E E DEPIE+P+E+DG++LLSTV AQF
Sbjct: 1 MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQF 35
>UniRef50_Q5BXS3 Cluster: SJCHGC01369 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC01369 protein - Schistosoma
japonicum (Blood fluke)
Length = 386
Score = 72.9 bits (171), Expect = 8e-12
Identities = 54/174 (31%), Positives = 76/174 (43%), Gaps = 20/174 (11%)
Frame = +1
Query: 250 CHGLKYXXXXXXXXXXXX--DERLSPPAEG-WPAYRYWCAFPRA----------ESPPPR 390
C GLKY D+RL PPA+G W + C FP+ +S +
Sbjct: 35 CTGLKYKSGDSGCFRGVRLLDDRLFPPADGHWYKNTFCCVFPKCSKRKADEDSWDSKMKQ 94
Query: 391 PR-----CSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTPPDYPKVLASSN--SP 549
R C+DLIVL LPW+ E+ +RDYFS +GDL+M+Q+KRD K
Sbjct: 95 KRFDKKTCTDLIVLNLPWRADEDTLRDYFSQYGDLVMIQIKRDPVTQQSKGYGFIRFADY 154
Query: 550 STKLNCVH*XXXXXXXXXXXMFASXXXXXXXXXLIRKVFVGRCTENITAEDLRE 711
+ ++ C+ + RKV VG TE+I+ E LR+
Sbjct: 155 AAQVMCLAERHTIENRQCDVRIPISKMEGDRQDVARKVHVGGLTEDISPETLRQ 208
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/41 (58%), Positives = 29/41 (70%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGK 632
T SKG+GFI+FA+Y AQ+ L RH I+ R CDVRIP K
Sbjct: 140 TQQSKGYGFIRFADYAAQVMCLAERHTIENRQCDVRIPISK 180
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = +2
Query: 149 YVPVSEGEQDEPIELPTEEDGSLLLSTVAAQF 244
YV + E E D+PIE+P E+D +LLLST+ AQF
Sbjct: 1 YVKICETEDDQPIEVPLEDDDTLLLSTLTAQF 32
>UniRef50_Q4RX96 Cluster: Chromosome 11 SCAF14979, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 11
SCAF14979, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 468
Score = 70.9 bits (166), Expect = 3e-11
Identities = 27/41 (65%), Positives = 34/41 (82%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGK 632
TG SKGFGF++FAEY+AQ + + +RHMIDGRWCD + PN K
Sbjct: 172 TGSSKGFGFVRFAEYDAQEKVISQRHMIDGRWCDCKFPNSK 212
Score = 59.3 bits (137), Expect = 1e-07
Identities = 24/34 (70%), Positives = 32/34 (94%)
Frame = +1
Query: 394 RCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQV 495
+ SDLIVLGLPWKTTE+ ++DYFS+FG+++MVQV
Sbjct: 103 KTSDLIVLGLPWKTTEQDLKDYFSTFGEVIMVQV 136
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/36 (61%), Positives = 31/36 (86%), Gaps = 1/36 (2%)
Frame = +2
Query: 140 MTE-YVPVSEGEQDEPIELPTEEDGSLLLSTVAAQF 244
MTE Y+ V+E E +EP+E+P+E+DG++ LSTVAAQF
Sbjct: 1 MTEGYIRVAEEENEEPMEIPSEDDGTVRLSTVAAQF 36
Score = 36.3 bits (80), Expect = 0.81
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = +1
Query: 655 RKVFVGRCTENITAEDLRE 711
RKVFVGRCTE++T +DLR+
Sbjct: 261 RKVFVGRCTEDMTTDDLRQ 279
>UniRef50_Q4H2Q6 Cluster: Ci-Tardbp protein; n=1; Ciona
intestinalis|Rep: Ci-Tardbp protein - Ciona intestinalis
(Transparent sea squirt)
Length = 440
Score = 63.3 bits (147), Expect = 6e-09
Identities = 27/53 (50%), Positives = 35/53 (66%)
Frame = +3
Query: 501 RYATGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGKDGSSTAHSK 659
R G S+G+GFI+F+ YE Q L +RH+I RWCDV+IP+ KD T SK
Sbjct: 172 RDENGKSRGYGFIRFSSYEVQELVLSQRHIIGERWCDVKIPHSKDQKPTVSSK 224
Score = 61.3 bits (142), Expect = 2e-08
Identities = 25/43 (58%), Positives = 34/43 (79%)
Frame = +1
Query: 376 SPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
S P +CSDLIVLGLPWK E+ +++YF+ +G+L+MV VKRD
Sbjct: 131 SKRPAQKCSDLIVLGLPWKIAEDDLKEYFAKYGELVMVLVKRD 173
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/40 (57%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = +2
Query: 128 SVSKMTEYVPVSEGEQDE-PIELPTEEDGSLLLSTVAAQF 244
+V YV ++E EQ+E PIE+PTEEDG+L LS+V AQF
Sbjct: 20 TVKMSASYVKIAEDEQEEEPIEIPTEEDGTLYLSSVTAQF 59
>UniRef50_A4GUK6 Cluster: TDP43 splice variant 2; n=1; Homo
sapiens|Rep: TDP43 splice variant 2 - Homo sapiens
(Human)
Length = 260
Score = 55.2 bits (127), Expect = 2e-06
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +2
Query: 140 MTEYVPVSEGEQDEPIELPTEEDGSLLLSTVAAQF 244
M+EY+ V+E E DEPIE+P+E+DG++LLSTV AQF
Sbjct: 1 MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQF 35
>UniRef50_UPI0000EB05D2 Cluster: TAR DNA-binding protein 43
(TDP-43).; n=1; Canis lupus familiaris|Rep: TAR
DNA-binding protein 43 (TDP-43). - Canis familiaris
Length = 294
Score = 52.8 bits (121), Expect = 9e-06
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGK 632
T S+ FG + F EYE Q++ ++HMIDG+WC ++PN K
Sbjct: 26 TSCSRQFGSVHFMEYETQVKVTSQQHMIDGQWCHCKLPNSK 66
Score = 33.5 bits (73), Expect = 5.7
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +1
Query: 436 TEEAVRDYFSSFGDLLMVQVKRDT 507
T E ++YF++FGD+L+ Q+K+DT
Sbjct: 1 TTETSKEYFNTFGDVLVDQIKKDT 24
>UniRef50_Q20414 Cluster: Putative uncharacterized protein tag-169;
n=3; Caenorhabditis|Rep: Putative uncharacterized
protein tag-169 - Caenorhabditis elegans
Length = 411
Score = 50.0 bits (114), Expect = 6e-05
Identities = 22/46 (47%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Frame = +3
Query: 501 RYATGLSKGFGFIKFAEYEAQLRALG-RRHMIDGRWCDVRIPNGKD 635
R + G SKGFGF++ + Q + L +HMIDGR CDV++P+G+D
Sbjct: 206 RKSDGNSKGFGFVRMSSVGEQNKVLAIPQHMIDGRRCDVKVPDGRD 251
Score = 39.5 bits (88), Expect = 0.086
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Frame = +1
Query: 403 DLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTPPD---YPKVLASSNSPSTKLNCVH 573
DLIVLG+ +KTT+E + YF G ++ ++KR + + + V SS K+ +
Sbjct: 174 DLIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSSVGEQNKVLAI- 232
Query: 574 *XXXXXXXXXXXMFASXXXXXXXXXLIRKVFVGRCTENITAEDLREV 714
+ I ++FVGR T+ + LR+V
Sbjct: 233 -PQHMIDGRRCDVKVPDGRDKQGRPSISRIFVGRLTDKVDEHQLRKV 278
Score = 34.3 bits (75), Expect = 3.3
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +2
Query: 146 EYVPVSEGEQDEPIELPTEEDGSLLLSTVAAQF 244
E++ V + DEPIELPT DG +L++T+ A F
Sbjct: 46 EFITVQDPNGDEPIELPT-VDGVVLMTTLQASF 77
>UniRef50_UPI0000D639AF Cluster: UPI0000D639AF related cluster; n=3;
Murinae|Rep: UPI0000D639AF UniRef100 entry - Mus
musculus
Length = 371
Score = 49.6 bits (113), Expect = 8e-05
Identities = 26/46 (56%), Positives = 30/46 (65%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ E R S LI L PWKTTE+ + DY SSFG+ LMVQVKRD
Sbjct: 73 KTEKGDSSKRTSGLIALDFPWKTTEQDLIDY-SSFGEGLMVQVKRD 117
>UniRef50_UPI0000E47947 Cluster: PREDICTED: similar to GA10247-PA;
n=4; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to GA10247-PA - Strongylocentrotus purpuratus
Length = 519
Score = 48.8 bits (111), Expect = 1e-04
Identities = 20/34 (58%), Positives = 27/34 (79%)
Frame = +1
Query: 403 DLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
DLIVLGL + TT+E +++YF +G+LLM VKRD
Sbjct: 120 DLIVLGLDYNTTDEEMKEYFGKYGELLMAHVKRD 153
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRHMID--GRWCDVRIPN 626
T SKGFGFI++ + ++Q + +RH ID RWC+V+ PN
Sbjct: 156 TQKSKGFGFIRYKDVDSQEGVVEKRHKIDLSSRWCEVKYPN 196
Score = 37.1 bits (82), Expect = 0.46
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +2
Query: 161 SEGEQDEPIELPTEEDGSLLLSTVAAQF 244
+E + D IELP E+DG+++LST+ AQF
Sbjct: 11 NETDPDSIIELPVEQDGTIMLSTIIAQF 38
>UniRef50_A7RU25 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 291
Score = 43.6 bits (98), Expect = 0.005
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = +1
Query: 403 DLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
DLIVLGLP+ TTE +++YF+ FG++ +VK D
Sbjct: 116 DLIVLGLPYATTESEMKEYFTRFGEIDFCEVKLD 149
Score = 42.3 bits (95), Expect = 0.012
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGKD 635
T S+GFGF++F + E L H I GR C+VR+P K+
Sbjct: 152 TRRSRGFGFVRFKKDEDAKNVLSTSHRIQGRLCEVRLPRPKE 193
Score = 33.5 bits (73), Expect = 5.7
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Frame = +2
Query: 140 MTE-YVPVSEGEQ--DEPIELPTEEDGSLLLSTVAAQF 244
MT+ YV V + E D+ IE+ EEDG+LLLS V QF
Sbjct: 1 MTQIYVRVVDDETCPDQAIEIEAEEDGTLLLSNVNGQF 38
>UniRef50_O94432 Cluster: mRNA cleavage factor complex subunit; n=1;
Schizosaccharomyces pombe|Rep: mRNA cleavage factor
complex subunit - Schizosaccharomyces pombe (Fission
yeast)
Length = 474
Score = 41.1 bits (92), Expect = 0.028
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1
Query: 373 ESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDT 507
E+ P + + GL W+TT++++RDYF FG++L V RD+
Sbjct: 154 ETSPFNREDGKMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDS 198
>UniRef50_Q7XDI5 Cluster: RNA recognition motif family protein,
expressed; n=5; Magnoliophyta|Rep: RNA recognition motif
family protein, expressed - Oryza sativa subsp. japonica
(Rice)
Length = 464
Score = 40.7 bits (91), Expect = 0.037
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTPPDYPK 525
L + G+ W+TTEE +RD+F+++GD+ V RD P+
Sbjct: 8 LFIGGISWETTEEKLRDHFAAYGDVSQAAVMRDKLTGRPR 47
Score = 32.7 bits (71), Expect = 9.9
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVR 617
TG +GFGF+ F++ + AL H +DGR DV+
Sbjct: 43 TGRPRGFGFVVFSDPSSVDAALVDPHTLDGRTVDVK 78
>UniRef50_Q9HEH4 Cluster: Related to heterogeneous nuclear
ribonucleoprotein; n=13; Fungi/Metazoa group|Rep:
Related to heterogeneous nuclear ribonucleoprotein -
Neurospora crassa
Length = 503
Score = 40.7 bits (91), Expect = 0.037
Identities = 15/33 (45%), Positives = 25/33 (75%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ + GL W+TT++++RDYFS FG+++ V RD
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRD 33
>UniRef50_UPI000023D975 Cluster: hypothetical protein FG10273.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG10273.1 - Gibberella zeae PH-1
Length = 552
Score = 39.9 bits (89), Expect = 0.065
Identities = 14/34 (41%), Positives = 26/34 (76%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDT 507
+ + GL W+TT++++RDYF+ FG+++ V RD+
Sbjct: 123 MFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDS 156
>UniRef50_Q4WHA5 Cluster: Heterogeneous nuclear ribonucleoprotein
HRP1; n=1; Aspergillus fumigatus|Rep: Heterogeneous
nuclear ribonucleoprotein HRP1 - Aspergillus fumigatus
(Sartorya fumigata)
Length = 608
Score = 39.9 bits (89), Expect = 0.065
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDT 507
+ + GL W+TT++++RDYFS FG++ V RD+
Sbjct: 107 MFIGGLNWETTDQSLRDYFSQFGEVQECTVMRDS 140
>UniRef50_Q5ZAN1 Cluster: Putative uncharacterized protein
OSJNBb0053G03.9; n=5; Oryza sativa|Rep: Putative
uncharacterized protein OSJNBb0053G03.9 - Oryza sativa
subsp. japonica (Rice)
Length = 407
Score = 39.5 bits (88), Expect = 0.086
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGR-RHMIDGRWCDVRI--PNGKDGSSTAHSKGIR-RPL 677
T + +GFGFI+FA E+ RAL + +H + G+W +V + P ++ +S ++ RP
Sbjct: 256 TKMPRGFGFIQFASEESTARALKKDKHFLCGQWVEVSLAMPKQQNAASGTSKLSVQARPF 315
Query: 678 Y 680
Y
Sbjct: 316 Y 316
>UniRef50_A7SCX6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 305
Score = 39.5 bits (88), Expect = 0.086
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTPPDYPKVLA 534
L V GL ++TT+E++++YFS +G+L+ V +K D P+ A
Sbjct: 31 LFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFA 73
>UniRef50_Q4PBU3 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 588
Score = 39.1 bits (87), Expect = 0.11
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
R+ P P + + GL W TTE+++R YFS FG++ + RD
Sbjct: 158 RSAMPHEMPEEGKMFIGGLNWDTTEDSLRRYFSQFGEVGNCAIMRD 203
>UniRef50_Q5ZAN0 Cluster: Putative uncharacterized protein
OSJNBb0053G03.10; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBb0053G03.10 - Oryza sativa subsp. japonica (Rice)
Length = 230
Score = 38.7 bits (86), Expect = 0.15
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGR-RHMIDGRWCDVRI--PNGKDGSSTAHSKGIR-RPL 677
T + +GFG I+FA E+ RAL + RH + G+W +V + P ++ +S ++ RP
Sbjct: 154 TKMPRGFGLIQFASEESTARALKKDRHFLCGQWVEVSLAMPKQQNAASGTSKLSVQARP- 212
Query: 678 YGEYYSRRSQRSTSAP 725
+Y S T+AP
Sbjct: 213 ---FYLATSSNFTAAP 225
>UniRef50_Q08473 Cluster: RNA-binding protein squid; n=22;
Endopterygota|Rep: RNA-binding protein squid -
Drosophila melanogaster (Fruit fly)
Length = 344
Score = 38.7 bits (86), Expect = 0.15
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
L V GL W+TTE+ +RD+F +G++ + VK D
Sbjct: 58 LFVGGLSWETTEKELRDHFGKYGEIESINVKTD 90
>UniRef50_O43347 Cluster: RNA-binding protein Musashi homolog 1;
n=65; Euteleostomi|Rep: RNA-binding protein Musashi
homolog 1 - Homo sapiens (Human)
Length = 362
Score = 38.7 bits (86), Expect = 0.15
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 364 PRAESPP-PRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
P SP P C + + GL W+TT+E +R+YF FG++ V RD
Sbjct: 8 PGLASPDSPHDPCK-MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRD 54
Score = 33.5 bits (73), Expect = 5.7
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +1
Query: 358 AFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFG 474
AFPR P R + V GL TT E V+ YF FG
Sbjct: 95 AFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFG 133
>UniRef50_A7QJZ9 Cluster: Chromosome undetermined scaffold_109,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_109, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 170
Score = 38.3 bits (85), Expect = 0.20
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = +1
Query: 322 PAEGWPAYRYWCAFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKR 501
P G + C P + + P P+ + L V GL ++TTEE++R+ F +FG L+ V +
Sbjct: 55 PRNGNDLFAVAC-LPSSPNQPSIPK-TRLYVSGLSFRTTEESLRNAFETFGQLVEVNLVM 112
Query: 502 DTPPDYPKVLA 534
D + P+ A
Sbjct: 113 DKIANRPRGFA 123
>UniRef50_Q5CRM8 Cluster: T8M16_190-plant like protein with RRM
domain; n=2; Cryptosporidium|Rep: T8M16_190-plant like
protein with RRM domain - Cryptosporidium parvum Iowa II
Length = 600
Score = 38.3 bits (85), Expect = 0.20
Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 501 RYATGLSKGFGFIKFAEYEAQLRALGR-RHMIDGR 602
R +G SKG+GF+ FA EA ++AL + H+IDGR
Sbjct: 218 RTKSGESKGYGFVTFASSEATIKALQQPHHLIDGR 252
>UniRef50_Q4S8N9 Cluster: Chromosome 7 SCAF14703, whole genome
shotgun sequence; n=4; Clupeocephala|Rep: Chromosome 7
SCAF14703, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 157
Score = 37.9 bits (84), Expect = 0.26
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ + GL W+T+ +++RDYFS FG++ V RD
Sbjct: 23 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRD 55
>UniRef50_Q8CD63 Cluster: 13 days embryo male testis cDNA, RIKEN
full-length enriched library, clone:6030413L18
product:Musashi homolog 2 (Drosophila), full insert
sequence; n=3; Deuterostomia|Rep: 13 days embryo male
testis cDNA, RIKEN full-length enriched library,
clone:6030413L18 product:Musashi homolog 2 (Drosophila),
full insert sequence - Mus musculus (Mouse)
Length = 192
Score = 37.9 bits (84), Expect = 0.26
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ + GL W+T+ +++RDYFS FG++ V RD
Sbjct: 23 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRD 55
>UniRef50_Q32LZ4 Cluster: Msi2h protein; n=4; Eutheria|Rep: Msi2h
protein - Mus musculus (Mouse)
Length = 193
Score = 37.9 bits (84), Expect = 0.26
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ + GL W+T+ +++RDYFS FG++ V RD
Sbjct: 23 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRD 55
>UniRef50_Q22037 Cluster: Heterogeneous nuclear ribonucleoprotein
A1; n=5; Caenorhabditis|Rep: Heterogeneous nuclear
ribonucleoprotein A1 - Caenorhabditis elegans
Length = 346
Score = 37.9 bits (84), Expect = 0.26
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 507 ATGLSKGFGFIKFAEYEAQLRA-LGRRHMIDGRWCDVRIPNGKDGSSTAHSKGIRRPLYG 683
AT +GFGF+ F ++++ + L + HM++G CDVR KD S A R G
Sbjct: 150 ATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMSKAQMNRDRETRGG 209
Query: 684 EYYSRRSQR 710
SR QR
Sbjct: 210 R--SRDGQR 216
>UniRef50_Q94AC3 Cluster: AT4g36960/C7A10_400; n=11;
Magnoliophyta|Rep: AT4g36960/C7A10_400 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 379
Score = 37.5 bits (83), Expect = 0.35
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
L+VLG+PW + ++DY S FGDL V +D
Sbjct: 5 LVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKD 37
Score = 34.7 bits (76), Expect = 2.5
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 507 ATGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGKD 635
+TG S+GFG++ FA E AL H + R +V++ K+
Sbjct: 39 STGRSRGFGYVTFASAEDAKNALKGEHFLGNRILEVKVATPKE 81
>UniRef50_Q5N7W0 Cluster: Pentatricopeptide (PPR) repeat-containing
protein-like; n=3; Oryza sativa|Rep: Pentatricopeptide
(PPR) repeat-containing protein-like - Oryza sativa
subsp. japonica (Rice)
Length = 712
Score = 37.5 bits (83), Expect = 0.35
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +1
Query: 364 PRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFG 474
P PP P S L V GL W E ++ D FSSFG
Sbjct: 45 PHPPPPPTPPSNSKLFVAGLSWSADERSLTDAFSSFG 81
>UniRef50_O23189 Cluster: RNA-binding like protein; n=1; Arabidopsis
thaliana|Rep: RNA-binding like protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 306
Score = 37.5 bits (83), Expect = 0.35
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
L+VLG+PW + ++DY S FGDL V +D
Sbjct: 5 LVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKD 37
>UniRef50_Q4UI71 Cluster: RNA-binding (SR) protein, putative; n=2;
Theileria|Rep: RNA-binding (SR) protein, putative -
Theileria annulata
Length = 303
Score = 37.5 bits (83), Expect = 0.35
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGKDGS 641
TG S+GFGF+ FA+ ++ L + H IDG DV++ K+ S
Sbjct: 65 TGRSRGFGFVTFADRDSVNTVLRKVHKIDGVEADVKLAVRKEKS 108
>UniRef50_Q6CC04 Cluster: Yarrowia lipolytica chromosome C of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome C of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 367
Score = 37.5 bits (83), Expect = 0.35
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ + GL W+TT+E++ +YF+ FG++L V RD
Sbjct: 1 MFIGGLNWETTDESLTNYFAQFGEVLECTVMRD 33
>UniRef50_UPI0000F1F0C3 Cluster: PREDICTED: similar to LOC561459
protein; n=1; Danio rerio|Rep: PREDICTED: similar to
LOC561459 protein - Danio rerio
Length = 329
Score = 37.1 bits (82), Expect = 0.46
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
L V GL W TT+E +R+YFS +G+++ + +D
Sbjct: 25 LFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKD 57
>UniRef50_Q4SEZ3 Cluster: Chromosome 1 SCAF14609, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 1
SCAF14609, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 476
Score = 37.1 bits (82), Expect = 0.46
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
L V GL W TT+E +R+YFS +G+++ + +D
Sbjct: 2 LFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKD 34
>UniRef50_Q9FX45 Cluster: RNA-binding glycine-rich protein,
putative; n=1; Arabidopsis thaliana|Rep: RNA-binding
glycine-rich protein, putative - Arabidopsis thaliana
(Mouse-ear cress)
Length = 181
Score = 37.1 bits (82), Expect = 0.46
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +1
Query: 364 PRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTPPDYPKVLA 534
P + S P+ + L V GL ++TTE+ +RD F FG+L+ + + D + PK A
Sbjct: 68 PPSSSSGPKTK---LYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGFA 121
>UniRef50_Q8W555 Cluster: AT3g07810/F17A17_15; n=11;
Magnoliophyta|Rep: AT3g07810/F17A17_15 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 494
Score = 37.1 bits (82), Expect = 0.46
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
L + G+ W T EE +++YFSSFG+++ + +D
Sbjct: 8 LFIGGISWDTNEERLKEYFSSFGEVIEAVILKD 40
>UniRef50_A2YHR7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 377
Score = 37.1 bits (82), Expect = 0.46
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALG----RRHMIDGRWCDVR 617
TG +GFGF++F E E RALG RH+I GR DV+
Sbjct: 57 TGHGRGFGFVEFEEEEDAARALGDGEHPRHLICGRVVDVK 96
>UniRef50_A4V6N1 Cluster: HnRNP A2/B1 protein; n=1; Dugesia
japonica|Rep: HnRNP A2/B1 protein - Dugesia japonica
(Planarian)
Length = 386
Score = 37.1 bits (82), Expect = 0.46
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = +1
Query: 358 AFPRAESPPPRPRCSD--LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
A P+ ES P C+ + + G+ TE+ ++DYFS+FG+++ +KRD
Sbjct: 93 AMPKEESLNPDIHCNSKRIFIGGIRRFFTEDDLKDYFSTFGEIVDCTIKRD 143
Score = 34.7 bits (76), Expect = 2.5
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ V GLP +TTE +R YFS +GD+ V RD
Sbjct: 20 IFVGGLPPQTTESDMRQYFSKYGDVCDVVAMRD 52
>UniRef50_UPI0000499D3C Cluster: RNA-binding protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: RNA-binding protein -
Entamoeba histolytica HM-1:IMSS
Length = 199
Score = 36.7 bits (81), Expect = 0.61
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 3/109 (2%)
Frame = +3
Query: 399 LRSYSSRLTMEDDRRSCTRLLLLLWRFADGSSKTRYATGLSKGFGFIKFAEYEAQLRALG 578
L Y L++ D+ + + + T + G SKGFGF+ F + E +A+
Sbjct: 4 LEVYVGNLSLNTDKDKLKEVFASVGEIKNSRVAT-HKDGASKGFGFVTFNDEETAEKAVN 62
Query: 579 RRH--MIDGRWCDVRIPNGKDGSSTAHSK-GIRRPLYGEYYSRRSQRST 716
+ IDG V+I +D H + R +G Y R RS+
Sbjct: 63 EMNGKEIDGSIVVVQISRPQDRKRRDHYRSSYRHSYHGRSYDRSRSRSS 111
>UniRef50_Q9FIU6 Cluster: Similarity to RNA-binding protein; n=4;
Magnoliophyta|Rep: Similarity to RNA-binding protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 156
Score = 36.7 bits (81), Expect = 0.61
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +1
Query: 340 AYRYWCAFPRAESPPP-RPRC---SDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDT 507
A R+ P+AES P RP+ ++L V GL +TT E +R F+ FG++ +V D
Sbjct: 32 ASRFSFLSPQAESQTPARPQAEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDR 91
Query: 508 PPDYPK 525
Y K
Sbjct: 92 VSGYSK 97
Score = 33.9 bits (74), Expect = 4.3
Identities = 24/83 (28%), Positives = 37/83 (44%)
Frame = +3
Query: 363 PTRGIAAASTTMLRSYSSRLTMEDDRRSCTRLLLLLWRFADGSSKTRYATGLSKGFGFIK 542
P R A ST + S S+ T + R+ AD T +G SKGFGF++
Sbjct: 47 PARPQAEPSTNLFVSGLSKRTTSEGLRTA---FAQFGEVADAKVVTDRVSGYSKGFGFVR 103
Query: 543 FAEYEAQLRALGRRHMIDGRWCD 611
+A E + + +DG++ D
Sbjct: 104 YATLEDSAKGIAG---MDGKFLD 123
>UniRef50_Q9VVE5 Cluster: CG32169-PA; n=9; Endopterygota|Rep:
CG32169-PA - Drosophila melanogaster (Fruit fly)
Length = 369
Score = 36.7 bits (81), Expect = 0.61
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ + GL W+T+ E++RDYF +GD+ V +D
Sbjct: 31 MFIGGLSWQTSPESLRDYFGRYGDISEAMVMKD 63
Score = 32.7 bits (71), Expect = 9.9
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +1
Query: 358 AFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDL 480
AFPR P R + V GL TT E V+ YF FG +
Sbjct: 104 AFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPI 144
>UniRef50_Q6PNM9 Cluster: AUF1 similar protein; n=3; Paracentrotus
lividus|Rep: AUF1 similar protein - Paracentrotus
lividus (Common sea urchin)
Length = 361
Score = 36.7 bits (81), Expect = 0.61
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTPPDYPK 525
L V GL W TT E ++ YFS++G + ++K+D P+
Sbjct: 52 LFVGGLAWNTTPETLQQYFSAYGTVQDCEIKKDQVTKKPR 91
>UniRef50_Q21911 Cluster: Putative uncharacterized protein msi-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein msi-1 - Caenorhabditis elegans
Length = 320
Score = 36.7 bits (81), Expect = 0.61
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ + GL W+TT E +RDYF FG++ V RD
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRD 79
>UniRef50_A7RG33 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 177
Score = 36.7 bits (81), Expect = 0.61
Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLL-MVQVKRD 504
+ + GL W TTEE ++DYFS +G ++ V +KRD
Sbjct: 2 IFIGGLNWNTTEEGLKDYFSQWGTIVDCVIMKRD 35
>UniRef50_Q96EP5 Cluster: DAZ-associated protein 1; n=39;
Euteleostomi|Rep: DAZ-associated protein 1 - Homo
sapiens (Human)
Length = 407
Score = 36.7 bits (81), Expect = 0.61
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
L V GL W TT+E +R YFS +G+++ + +D
Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKD 44
>UniRef50_Q9C5A7 Cluster: Putative uncharacterized protein
At5g08700; n=1; Arabidopsis thaliana|Rep: Putative
uncharacterized protein At5g08700 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 768
Score = 36.3 bits (80), Expect = 0.81
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
L V GLP+ TTEE + ++FS FGD+ V + D
Sbjct: 257 LFVHGLPYSTTEEELMEHFSKFGDISEVHLVLD 289
>UniRef50_Q501B0 Cluster: At2g46780; n=3; core eudicotyledons|Rep:
At2g46780 - Arabidopsis thaliana (Mouse-ear cress)
Length = 336
Score = 36.3 bits (80), Expect = 0.81
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +3
Query: 390 TTMLRSYSSRLTMEDDRRSCTRLLLLLWRFADGSSKTRYATGLSKGFGFIKFAEYEAQLR 569
T + + + L E R + R + T TG SKG+GF+ F E EA +R
Sbjct: 19 TKLTKIFVGGLAWETQRDTMRRYFEQFGEIVEAVVITDKNTGRSKGYGFVTFKEAEAAMR 78
Query: 570 ALGRRH-MIDGR 602
A + +IDGR
Sbjct: 79 ACQNMNPVIDGR 90
>UniRef50_Q5WRT9 Cluster: Putative uncharacterized protein; n=4;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1987
Score = 36.3 bits (80), Expect = 0.81
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -3
Query: 643 DEPSLPFGMRTSHQRPSIMCRRPNARS*ASYSANLMKPKPLDSPVA 506
+EP G++TS Q PS +RP+ A S+N++ P P +P +
Sbjct: 1465 NEPDQTTGLKTSQQPPSFAAKRPSFGRQAQSSSNVIPPAPAPTPTS 1510
>UniRef50_Q4E5H3 Cluster: RNA-binding protein, putative; n=1;
Trypanosoma cruzi|Rep: RNA-binding protein, putative -
Trypanosoma cruzi
Length = 383
Score = 36.3 bits (80), Expect = 0.81
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +1
Query: 325 AEGWPAYRYWCAFPRAESPPPRPRC---SDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQV 495
A G P Y P + S PR S L V +P TTEE +R F +G+LL V++
Sbjct: 52 AAGQPVNVYQQIPPTSASRDPRTNIHIGSKLFVGQVPAMTTEEQLRPVFEPYGELLEVKI 111
Query: 496 KRD 504
RD
Sbjct: 112 MRD 114
>UniRef50_A2DHF2 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 202
Score = 36.3 bits (80), Expect = 0.81
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +3
Query: 501 RYATGLSKGFGFIKFAEYEAQLRALG--RRHMIDGRWCDVRIPNGKDGSSTAHSKGIRRP 674
R +G SKGFGFI++A E +A+ + +GR V I G+ ++ +G R
Sbjct: 79 RAQSGKSKGFGFIEYATQEEADKAIAEMNKKEFEGRTIVVDISRGRSERRSSERRGRRDD 138
Query: 675 LYGEYYSRRSQR 710
Y RR R
Sbjct: 139 DYDRRSDRRDDR 150
>UniRef50_Q6CG61 Cluster: Similar to sp|P31209 Schizosaccharomyces
pombe Polyadenylate-binding protein; n=1; Yarrowia
lipolytica|Rep: Similar to sp|P31209 Schizosaccharomyces
pombe Polyadenylate-binding protein - Yarrowia
lipolytica (Candida lipolytica)
Length = 589
Score = 36.3 bits (80), Expect = 0.81
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +3
Query: 507 ATGLSKGFGFIKFAEYEAQLRALGRRH--MIDGRWCDVRIPNGKDGSSTAHSKGIRRP 674
A G SKGFGF+ F + + A+ H I+G V I + KD S +S G R P
Sbjct: 328 AVGNSKGFGFVCFRDPDHASNAIAEMHNRPIEGNVLQVAIAHKKDPQSAPYSLGKRFP 385
>UniRef50_Q9SU99 Cluster: HnRNP-like protein; n=10; core
eudicotyledons|Rep: HnRNP-like protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 524
Score = 35.9 bits (79), Expect = 1.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
L + G+ W T EE +++YF +GDL+ + RD
Sbjct: 10 LFIGGISWDTDEERLQEYFGKYGDLVEAVIMRD 42
Score = 35.5 bits (78), Expect = 1.4
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVR 617
TG ++GFGFI FA+ R + +H+IDGR + +
Sbjct: 45 TGRARGFGFIVFADPSVAERVIMDKHIIDGRTVEAK 80
>UniRef50_Q259G3 Cluster: H0124B04.13 protein; n=5; Oryza
sativa|Rep: H0124B04.13 protein - Oryza sativa (Rice)
Length = 913
Score = 35.9 bits (79), Expect = 1.1
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +3
Query: 390 TTMLRSYSSRLTMEDDRRSCTRLLLLLWRFADGSSKTRYATGLSKGFGFIKFAE----YE 557
T M + Y L++ + L L + + TGLSKG+GF++++ E
Sbjct: 301 TDMAKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAE 360
Query: 558 AQLRALGRRHMIDGRWCDVRI 620
A + GR ++DGR +VR+
Sbjct: 361 AVIHLNGR--LVDGRKIEVRV 379
Score = 35.5 bits (78), Expect = 1.4
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRH--MIDGRWCDVRI---PNGKDGSSTAHSKGIRRP 674
TGLS+G+GF+K+++ A+ R + +++GR +VR+ P+ +D S +
Sbjct: 246 TGLSQGYGFVKYSDPRCASEAIKRMNGRLVEGRALEVRVAGFPSSEDNSQQPSKETDMAK 305
Query: 675 LY 680
LY
Sbjct: 306 LY 307
Score = 34.7 bits (76), Expect = 2.5
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Frame = +3
Query: 501 RYATGLSKGFGFIKFAEYEAQLRALGRRHM----IDGRWCDVRI 620
RY TG+SKGFGF+KFA +A A+ HM +DG +VRI
Sbjct: 724 RY-TGVSKGFGFVKFA--DAYSAAVALTHMNGYPLDGHVLEVRI 764
>UniRef50_Q9VU18 Cluster: CG10948-PC, isoform C; n=6;
Sophophora|Rep: CG10948-PC, isoform C - Drosophila
melanogaster (Fruit fly)
Length = 804
Score = 35.9 bits (79), Expect = 1.1
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = +1
Query: 364 PRAESPPPR-----PRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKR 501
P +PPP P C + V GLP TEE +R+ F S G++ +++ +
Sbjct: 217 PNPNAPPPTIRERPPGCRTVFVGGLPENITEEVIREIFESCGEITTLRMSK 267
>UniRef50_Q4QHE5 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 950
Score = 35.9 bits (79), Expect = 1.1
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +1
Query: 370 AESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKR 501
A PP LIV LP++ TE+ VR+ FS+F ++ V+V R
Sbjct: 854 ASRVPPGSDPQKLIVKNLPFEATEKDVRELFSAFSEIRTVRVPR 897
>UniRef50_A7SIF0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 190
Score = 35.9 bits (79), Expect = 1.1
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Frame = +3
Query: 507 ATGLSKGFGFIKFAEYEAQLRALGRR-----HMIDGRWCDVR--IPNGKDGSSTAHSK 659
AT S+GFG++ FA+Y+ L + H IDG+ +V+ IP D S+T+H K
Sbjct: 50 ATKKSRGFGYVTFADYKVTRNVLKDKVENGAHRIDGKEVEVKRAIPR-DDNSATSHEK 106
>UniRef50_Q9LNP1 Cluster: F1L3.34; n=2; Arabidopsis thaliana|Rep:
F1L3.34 - Arabidopsis thaliana (Mouse-ear cress)
Length = 392
Score = 35.5 bits (78), Expect = 1.4
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +3
Query: 483 DGSSKTRYATGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVR--IPNG-KDGSSTAH 653
D T TG +GFGF+ FA+ + L H+ID R D++ +P G KD A
Sbjct: 117 DSVIMTDRITGNPRGFGFVTFADSAVAEKVLEEDHVIDDRKVDLKRTLPRGDKDTDIKAV 176
Query: 654 SK 659
SK
Sbjct: 177 SK 178
>UniRef50_Q75KB4 Cluster: Putative RNA binding protein; n=4; Oryza
sativa|Rep: Putative RNA binding protein - Oryza sativa
subsp. japonica (Rice)
Length = 291
Score = 35.5 bits (78), Expect = 1.4
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Frame = +3
Query: 507 ATGLSKGFGFIKFAEYEAQLRALG----RRHMIDGRWCDVR 617
A+G S+GFGF++FA+ A LRAL H+ GR DV+
Sbjct: 41 ASGNSRGFGFVEFADEAATLRALADDEMPNHVFRGRKVDVK 81
>UniRef50_Q1ENZ5 Cluster: RNA-binding protein, putative; n=2;
Magnoliophyta|Rep: RNA-binding protein, putative - Musa
acuminata (Banana)
Length = 465
Score = 35.5 bits (78), Expect = 1.4
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
L + G+ W T E+++R YFS+FG+++ + +D
Sbjct: 8 LFIGGISWDTNEDSLRKYFSAFGEVVEAVIMKD 40
Score = 35.1 bits (77), Expect = 1.9
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVR 617
TG ++GFGF+ FA+ R + +H IDGR + +
Sbjct: 43 TGRARGFGFVVFADPAVTERVVTEKHTIDGRMVEAK 78
>UniRef50_A2YR27 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 221
Score = 35.5 bits (78), Expect = 1.4
Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +1
Query: 364 PRAESPPPRPRCS-DLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTPPDYPK 525
P+ +PPP+ S +L + GL +TT + +++ F+ FG+++ +V D + K
Sbjct: 23 PKPPTPPPKADPSPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSK 77
>UniRef50_A4RNA8 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 279
Score = 35.5 bits (78), Expect = 1.4
Identities = 30/80 (37%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = +3
Query: 501 RYATGLSKGFGFIKFAEYEAQLRAL--GRRHMIDGRWCDV--RIPNGKDGSSTAHSKGIR 668
R A GLSKGFGFI F EA +A GR +V RI K G+ A ++ R
Sbjct: 106 RDARGLSKGFGFIYFETPEAAQKACEEANNTFWHGRRINVAPRIKASKPGNRDAMNQEER 165
Query: 669 RPLYGEYYSRRSQRSTSAPL 728
P Y ST A L
Sbjct: 166 TPTSSLYIGNIPYESTDAAL 185
>UniRef50_Q9FI04 Cluster: Arabidopsis thaliana genomic DNA,
chromosome 5, P1 clone:MGN6; n=3; Arabidopsis
thaliana|Rep: Arabidopsis thaliana genomic DNA,
chromosome 5, P1 clone:MGN6 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 100
Score = 35.1 bits (77), Expect = 1.9
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 507 ATGLSKGFGFIKFAEYEAQLRAL-GRRHMIDGRWCDVRI 620
AT SKGFGF+ F E E+ RA H IDGR + ++
Sbjct: 45 ATQRSKGFGFVTFREVESATRACENPNHTIDGRTVNCKL 83
Score = 34.7 bits (76), Expect = 2.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 385 PRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
P R + + V GLPW T E + YF FG+++ +V D
Sbjct: 4 PNDRETKIYVAGLPWITRTEGLISYFERFGEIVYAKVVCD 43
>UniRef50_Q0ITI7 Cluster: Os11g0250000 protein; n=5; Oryza
sativa|Rep: Os11g0250000 protein - Oryza sativa subsp.
japonica (Rice)
Length = 500
Score = 35.1 bits (77), Expect = 1.9
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +1
Query: 391 PRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
P+ S++ + GLP TTEE +R+ SFG++ V++ +D
Sbjct: 101 PQGSEVFIGGLPRDTTEEDLRELCDSFGEIYEVRLMKD 138
>UniRef50_Q5CS11 Cluster: Musashi. RRM domain containing protein,
splicing related; n=2; Cryptosporidium|Rep: Musashi. RRM
domain containing protein, splicing related -
Cryptosporidium parvum Iowa II
Length = 507
Score = 35.1 bits (77), Expect = 1.9
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 498 TRYATGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVR--IPNG 629
T TG S+GFGFI FA E+ L ++DG+ D + +P G
Sbjct: 56 TEKTTGRSRGFGFITFASEESVDAVLSSPQIVDGKEIDCKRAVPRG 101
>UniRef50_Q57XH6 Cluster: RNA-binding protein, putative; n=1;
Trypanosoma brucei|Rep: RNA-binding protein, putative -
Trypanosoma brucei
Length = 318
Score = 35.1 bits (77), Expect = 1.9
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 364 PRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
P E +C+ + GL + T + V +YFS+FGD++ +KRD
Sbjct: 9 PLEEEAISAEKCTRFFIGGLHRQITPQDVEEYFSNFGDVMTFILKRD 55
>UniRef50_Q14103 Cluster: Heterogeneous nuclear ribonucleoprotein
D0; n=123; Deuterostomia|Rep: Heterogeneous nuclear
ribonucleoprotein D0 - Homo sapiens (Human)
Length = 355
Score = 35.1 bits (77), Expect = 1.9
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ + GL W TT++ ++DYFS FG+++ +K D
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLD 131
>UniRef50_UPI0000E476D6 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 102
Score = 34.7 bits (76), Expect = 2.5
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 507 ATGLSKGFGFIKFAEYEAQLRALGR-RHMIDGRWCDVR 617
+TG SKGFGF+ F AL R +H++DG +V+
Sbjct: 43 STGFSKGFGFVSFGNTSGMQSALKREQHLLDGHKVNVQ 80
>UniRef50_Q9LHL2 Cluster: Similarity to RNA binding protein; n=13;
Magnoliophyta|Rep: Similarity to RNA binding protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 358
Score = 34.7 bits (76), Expect = 2.5
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVR--IPNGKDGSSTAHSK 659
TG +GFGFI FA+ + + H+I+G+ +++ IP G G+ + K
Sbjct: 56 TGQPRGFGFITFADPSVVDKVIEDTHVINGKQVEIKRTIPKGAGGNQSKDIK 107
>UniRef50_Q8W4A6 Cluster: Putative uncharacterized protein MJH23.3;
n=2; Arabidopsis thaliana|Rep: Putative uncharacterized
protein MJH23.3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 231
Score = 34.7 bits (76), Expect = 2.5
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVR--IPNGKDGSSTAHSK 659
TG +GFGFI FA+ + + H+I+G+ +++ IP G G+ + K
Sbjct: 56 TGQPRGFGFITFADPSVVDKVIEDTHVINGKQVEIKRTIPKGAGGNQSKDIK 107
>UniRef50_Q8LEE2 Cluster: Glycine-rich RNA-binding protein-like;
n=2; Arabidopsis thaliana|Rep: Glycine-rich RNA-binding
protein-like - Arabidopsis thaliana (Mouse-ear cress)
Length = 337
Score = 34.7 bits (76), Expect = 2.5
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 400 SDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ + V GLP+ TEEAVR FS +G +L V++ D
Sbjct: 7 NSVYVGGLPYDITEEAVRRVFSIYGSVLTVKIVND 41
>UniRef50_Q5JK61 Cluster: RNA recognition motif (RRM)-containing
protein-like; n=7; Oryza sativa|Rep: RNA recognition
motif (RRM)-containing protein-like - Oryza sativa
subsp. japonica (Rice)
Length = 310
Score = 34.7 bits (76), Expect = 2.5
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ V GL W+T +E +R YF FGD+L V D
Sbjct: 23 VFVGGLAWETQKEGMRGYFEQFGDILEAVVITD 55
>UniRef50_Q5BRN0 Cluster: SJCHGC07795 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07795 protein - Schistosoma
japonicum (Blood fluke)
Length = 98
Score = 34.7 bits (76), Expect = 2.5
Identities = 13/33 (39%), Positives = 24/33 (72%)
Frame = +2
Query: 146 EYVPVSEGEQDEPIELPTEEDGSLLLSTVAAQF 244
+++ V E + + PIE+P EED ++LL+T+ + F
Sbjct: 5 KFIRVCEDDDESPIEVPVEEDDTVLLATLKSVF 37
>UniRef50_A4V6K1 Cluster: DAZ-associated protein; n=2;
Platyhelminthes|Rep: DAZ-associated protein - Dugesia
japonica (Planarian)
Length = 296
Score = 34.7 bits (76), Expect = 2.5
Identities = 11/36 (30%), Positives = 25/36 (69%)
Frame = +3
Query: 504 YATGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCD 611
+ TG S+GFG++++++ EA + + +H ++G+ D
Sbjct: 50 HRTGRSRGFGYVRYSDNEAVQKVMSTKHHLEGKEID 85
Score = 33.1 bits (72), Expect = 7.5
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
L V GL TT E+++ YFS FGD++ V D
Sbjct: 17 LFVGGLHQSTTNESLKSYFSKFGDVVEASVMMD 49
>UniRef50_A2GMP0 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 366
Score = 34.7 bits (76), Expect = 2.5
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 504 YATGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRI 620
YA G+ KGFGF+KF+ Y+ L A+ + + ++ +RI
Sbjct: 139 YANGVHKGFGFVKFSTYQECLSAIEKLNNVNAWGRPLRI 177
>UniRef50_A2EGD1 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 93
Score = 34.7 bits (76), Expect = 2.5
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +1
Query: 394 RCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
RC ++V LP +TTE+ ++D F FGDL +++K D
Sbjct: 4 RCI-ILVSNLPPQTTEQTIKDAFVIFGDLADIKMKMD 39
>UniRef50_O14979 Cluster: Heterogeneous nuclear ribonucleoprotein
D-like; n=24; Mammalia|Rep: Heterogeneous nuclear
ribonucleoprotein D-like - Homo sapiens (Human)
Length = 420
Score = 34.7 bits (76), Expect = 2.5
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 420 LTMEDDRRSCTRLLLLLWRFADGSSKTRYATGLSKGFGFIKFAEYEAQLRALG-RRHMID 596
L+ + ++ T L D + KT TG S+GFGF+ F + + + L + H +D
Sbjct: 155 LSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLD 214
Query: 597 GRWCD 611
G+ D
Sbjct: 215 GKLID 219
>UniRef50_UPI00015560CE Cluster: PREDICTED: similar to heterogeneous
nuclear ribonucleoprotein A1; n=4; Mammalia|Rep:
PREDICTED: similar to heterogeneous nuclear
ribonucleoprotein A1 - Ornithorhynchus anatinus
Length = 280
Score = 34.3 bits (75), Expect = 3.3
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
++ESP + L + GL ++TT+E++R +F +G L V RD
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRD 48
>UniRef50_UPI0000E4626F Cluster: PREDICTED: similar to heterogeneous
nuclear ribonucleoprotein A2/B1 isoform 1; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
heterogeneous nuclear ribonucleoprotein A2/B1 isoform 1
- Strongylocentrotus purpuratus
Length = 360
Score = 34.3 bits (75), Expect = 3.3
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 358 AFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLL 483
A R E P P V G+P +TTEE +R YFS FG ++
Sbjct: 91 AMARDEKGPKNPSFK-CFVGGIPKETTEEELRAYFSQFGQIV 131
>UniRef50_Q8LPB0 Cluster: Glycine-rich RNA-binding protein; n=1;
Physcomitrella patens|Rep: Glycine-rich RNA-binding
protein - Physcomitrella patens (Moss)
Length = 155
Score = 34.3 bits (75), Expect = 3.3
Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Frame = +1
Query: 400 SDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQV--KRDT 507
S L V GL W TT++ +++ FS+FG++ V++ RDT
Sbjct: 42 SKLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDT 79
>UniRef50_Q3ED69 Cluster: Uncharacterized protein At1g22910.3; n=8;
Magnoliophyta|Rep: Uncharacterized protein At1g22910.3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 347
Score = 34.3 bits (75), Expect = 3.3
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +3
Query: 372 GIAAASTTMLRSYSSRLTMEDDRRSCTRLLLLLWRFADGSSKTRYATGLSKGFGFIKFAE 551
GI TT + + L E + + + + T A+G SKG+GF+ F E
Sbjct: 4 GIGLGDTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFRE 63
Query: 552 YEAQLRA-LGRRHMIDGR 602
EA A + +IDGR
Sbjct: 64 AEAARSACVDATPVIDGR 81
>UniRef50_Q1PES4 Cluster: RNA recognition motif-containing protein;
n=2; Arabidopsis thaliana|Rep: RNA recognition
motif-containing protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 317
Score = 34.3 bits (75), Expect = 3.3
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +3
Query: 390 TTMLRSYSSRLTMEDDRRSCTRLLLLLWRFADGSSKTRYATGLSKGFGFIKFAEYEAQLR 569
T + + + LT R + D + + G SKG+GFI F +Y + +R
Sbjct: 9 TRVTKIFVGNLTWRTTADDLRRYFEQFGQVVDANVVSETYPGRSKGYGFITFRDYVSTVR 68
Query: 570 AL-GRRHMIDGR 602
AL + +IDGR
Sbjct: 69 ALQNSKPIIDGR 80
Score = 33.1 bits (72), Expect = 7.5
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 394 RCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTPPDYPK 525
R + + V L W+TT + +R YF FG ++ V +T P K
Sbjct: 10 RVTKIFVGNLTWRTTADDLRRYFEQFGQVVDANVVSETYPGRSK 53
>UniRef50_A7PX80 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=2; core eudicotyledons|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 103
Score = 34.3 bits (75), Expect = 3.3
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 412 VLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
V GL W E++++D FSSFGD+ V++ D
Sbjct: 5 VEGLSWSVDEKSLKDAFSSFGDVTEVRIMYD 35
>UniRef50_A2XEH7 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 206
Score = 34.3 bits (75), Expect = 3.3
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
L V GLPW+T +AVR +F FG+++ V D
Sbjct: 10 LFVGGLPWETRGDAVRRHFEQFGEIVEAVVIAD 42
>UniRef50_Q6X9Z2 Cluster: HnRNP core protein A1; n=2;
Laurasiatheria|Rep: HnRNP core protein A1 - Equus
caballus (Horse)
Length = 61
Score = 34.3 bits (75), Expect = 3.3
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
++ESP + L + GL ++TT+E++R +F +G L V RD
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRD 48
>UniRef50_A6SJV1 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 518
Score = 34.3 bits (75), Expect = 3.3
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 507 ATGLSKGFGFIKFAEYEAQLRALGRRH--MIDGRWCDVRIPNGKDGSSTAHSKGIRRPLY 680
ATG SKGFG+++F + AL + +IDGR +V +D ++ R +
Sbjct: 302 ATGRSKGFGYVEFVKSSDAAAALAAKKGALIDGREANVDFSTPRDTTAPRERANNRAAQF 361
Query: 681 GE 686
G+
Sbjct: 362 GD 363
>UniRef50_A3LZT4 Cluster: Predicted protein; n=1; Pichia
stipitis|Rep: Predicted protein - Pichia stipitis
(Yeast)
Length = 481
Score = 34.3 bits (75), Expect = 3.3
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ + GL W TTEE + YFS FG+++ + +D
Sbjct: 162 MFIGGLNWDTTEEGLVSYFSKFGEVVDYTIMKD 194
>UniRef50_P09651 Cluster: Heterogeneous nuclear ribonucleoprotein
A1; n=390; Euteleostomi|Rep: Heterogeneous nuclear
ribonucleoprotein A1 - Homo sapiens (Human)
Length = 372
Score = 34.3 bits (75), Expect = 3.3
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
++ESP + L + GL ++TT+E++R +F +G L V RD
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRD 48
>UniRef50_A7MXD2 Cluster: Putative uncharacterized protein; n=1;
Vibrio harveyi ATCC BAA-1116|Rep: Putative
uncharacterized protein - Vibrio harveyi ATCC BAA-1116
Length = 226
Score = 33.9 bits (74), Expect = 4.3
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 364 PRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
P +S P L V LP+K E VRD F+ +G + V++ +D
Sbjct: 125 PVLQSSDSDPSTKTLYVGNLPYKANESHVRDLFAEYGQVYAVRLMKD 171
>UniRef50_A7QXI3 Cluster: Chromosome undetermined scaffold_225,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_225, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 751
Score = 33.9 bits (74), Expect = 4.3
Identities = 29/98 (29%), Positives = 37/98 (37%), Gaps = 2/98 (2%)
Frame = +3
Query: 330 GLAGLPILVCLPTRGIAAASTTMLRSYSSRLTMEDDRRSCTRLLLLLWRFADGSSKTRYA 509
G +GL I T+ T+ Y L D L + A A
Sbjct: 490 GSSGLEIGSTPDTQSKPNKETSDADLYVGYLPQTMDENCLAELFAPFGKIAKTKVIKDRA 549
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRH--MIDGRWCDVR 617
TG+SKG+GF+KF AL H IDG+ VR
Sbjct: 550 TGISKGYGFVKFENPAHAALALSHMHGYKIDGKTLAVR 587
>UniRef50_A7PIB0 Cluster: Chromosome chr13 scaffold_17, whole genome
shotgun sequence; n=2; core eudicotyledons|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 287
Score = 33.9 bits (74), Expect = 4.3
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ V GL W+T +EA+RD+F +G++L + D
Sbjct: 18 VFVGGLAWETPKEAMRDHFEKYGEILEAVIISD 50
>UniRef50_Q6GYB0 Cluster: Splice factor; n=1; Toxoplasma gondii|Rep:
Splice factor - Toxoplasma gondii
Length = 345
Score = 33.9 bits (74), Expect = 4.3
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTPPD 516
R SP PR + S + V LP TE + D F FG + ++++RD D
Sbjct: 10 RRRSPSPR-QGSRIFVANLPLDVTENELEDLFYKFGRIEDIEMRRDRTND 58
>UniRef50_Q552K5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 699
Score = 33.9 bits (74), Expect = 4.3
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 394 RCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+C+ + V G+ WK E ++ YF FG++L ++ D
Sbjct: 101 KCTKIFVGGISWKADENTLKTYFLQFGNVLECKIIMD 137
>UniRef50_A4V6K2 Cluster: PRM10 protein; n=1; Dugesia japonica|Rep:
PRM10 protein - Dugesia japonica (Planarian)
Length = 325
Score = 33.9 bits (74), Expect = 4.3
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
L V GL W+TTEE +++YF ++G + +K D
Sbjct: 74 LFVGGLSWETTEEDLKNYFETWGKVAHCVIKLD 106
Score = 32.7 bits (71), Expect = 9.9
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 364 PRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDT 507
P+ P P + V GL + TEE +++YFS +G + V + DT
Sbjct: 144 PKPAKPTKEPN-KKIFVGGLSPEVTEEQIKEYFSQYGSVESVDLPFDT 190
>UniRef50_A0CCB3 Cluster: Chromosome undetermined scaffold_167,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_167,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 199
Score = 33.9 bits (74), Expect = 4.3
Identities = 16/40 (40%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +1
Query: 385 PRPRCSDLIVLG-LPWKTTEEAVRDYFSSFGDLLMVQVKR 501
P+ R +I +G LP+ EE +++YF+ FGD+L V++ R
Sbjct: 42 PQERQHGIIYVGHLPYGFVEEGLKEYFTQFGDVLGVKLFR 81
>UniRef50_Q6BL35 Cluster: Debaryomyces hansenii chromosome F of
strain CBS767 of Debaryomyces hansenii; n=4;
Saccharomycetales|Rep: Debaryomyces hansenii chromosome
F of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 495
Score = 33.9 bits (74), Expect = 4.3
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +1
Query: 364 PRAESPPPRPRCSD---LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
P+ + PP D + + GL W TTE+ + +YF+ +G+++ + RD
Sbjct: 155 PQPQQLPPSNMGKDHGKMFIGGLNWDTTEQGLVEYFTKYGEVIDHTIMRD 204
>UniRef50_UPI00015B4D1C Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 778
Score = 33.5 bits (73), Expect = 5.7
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +3
Query: 516 LSKGFGFIKFAEYEAQLRALGRRH--MIDGRWCDVRIPNGKDGSSTAHSKG 662
L++GFGF++F + +A A+ + M GR DV+ P K+G+S A G
Sbjct: 46 LNRGFGFVQFDDEQAAQNAIKNENGSMFKGRRIDVK-PAKKEGTSNAGGGG 95
>UniRef50_UPI0000F2CBBE Cluster: PREDICTED: similar to musashi
homolog 1 (Drosophila),; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to musashi homolog 1 (Drosophila), -
Monodelphis domestica
Length = 432
Score = 33.5 bits (73), Expect = 5.7
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +1
Query: 358 AFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFG 474
AFPR P R + V GL TT E V+ YF FG
Sbjct: 180 AFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFG 218
>UniRef50_UPI0000DB6DF2 Cluster: PREDICTED: similar to squid
CG16901-PC, isoform C; n=2; Apocrita|Rep: PREDICTED:
similar to squid CG16901-PC, isoform C - Apis mellifera
Length = 320
Score = 33.5 bits (73), Expect = 5.7
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
L V GL TT++ +RD+FS FG++ + VK D
Sbjct: 61 LFVGGLSRNTTDKELRDHFSKFGEIESISVKID 93
>UniRef50_Q9FI08 Cluster: Similarity to RNA-binding protein; n=1;
Arabidopsis thaliana|Rep: Similarity to RNA-binding
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 169
Score = 33.5 bits (73), Expect = 5.7
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTPPD 516
+ V GLPW T +E + ++F FG+++ V V D D
Sbjct: 15 IYVGGLPWTTRKEGLINFFKRFGEIIHVNVVCDRETD 51
>UniRef50_Q99383 Cluster: Nuclear polyadenylated RNA-binding protein
4; n=7; Saccharomycetales|Rep: Nuclear polyadenylated
RNA-binding protein 4 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 534
Score = 33.5 bits (73), Expect = 5.7
Identities = 13/46 (28%), Positives = 28/46 (60%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
R+++ + C + + GL W TTE+ +R+YF +G + +++ +D
Sbjct: 149 RSKADLSKESCK-MFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKD 193
>UniRef50_UPI0000DB6D53 Cluster: PREDICTED: similar to CG32169-PA
isoform 2; n=1; Apis mellifera|Rep: PREDICTED: similar
to CG32169-PA isoform 2 - Apis mellifera
Length = 426
Score = 33.1 bits (72), Expect = 7.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +1
Query: 358 AFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDL 480
AFPR P R + V GL TT E V++YF FG +
Sbjct: 173 AFPRRTHPKMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPI 213
>UniRef50_UPI00006CBFBB Cluster: probable RNA-binding protein; n=1;
Tetrahymena thermophila SB210|Rep: probable RNA-binding
protein - Tetrahymena thermophila SB210
Length = 718
Score = 33.1 bits (72), Expect = 7.5
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKR 501
L VL LP+ TEE V+D F +G LL +++ +
Sbjct: 252 LYVLNLPYDITEEEVKDVFRKYGKLLEIKMPK 283
>UniRef50_UPI0000211FC5 Cluster: PREDICTED: RNA binding motif
protein 3; n=2; Eutheria|Rep: PREDICTED: RNA binding
motif protein 3 - Pan troglodytes
Length = 211
Score = 33.1 bits (72), Expect = 7.5
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
L V GL + T E+A+ D+FSSFG + V V +D
Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKD 40
>UniRef50_Q5PPI5 Cluster: Putative uncharacterized protein; n=1;
Rattus norvegicus|Rep: Putative uncharacterized protein
- Rattus norvegicus (Rat)
Length = 148
Score = 33.1 bits (72), Expect = 7.5
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
L V GL + T E+A+ D+FSSFG + V V +D
Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKD 40
>UniRef50_Q5E219 Cluster: Putative uncharacterized protein; n=1;
Vibrio fischeri ES114|Rep: Putative uncharacterized
protein - Vibrio fischeri (strain ATCC 700601 / ES114)
Length = 116
Score = 33.1 bits (72), Expect = 7.5
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 370 AESPPPRPRCSDLIVLG-LPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
A++ P + S + +G LP++ E V++ F+ FGD+ V++ +D
Sbjct: 60 ADTAPNSDQASTTLYVGNLPYRANESDVKELFAEFGDVFAVRLMKD 105
>UniRef50_Q3W0A8 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. EAN1pec|Rep: Putative uncharacterized
protein - Frankia sp. EAN1pec
Length = 322
Score = 33.1 bits (72), Expect = 7.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 657 SNEPSTSRPCRSGCEHRTSARLSCVGGLMHAVELRTRR 544
S EP T PCR G ++ AR G ++ E R+RR
Sbjct: 39 SGEPGTPMPCRCGRQNPAGARFCTCGEMLVRFEARSRR 76
>UniRef50_Q0FT73 Cluster: Putative hypothetical Gifsy-1 prophage
protein; n=1; Roseovarius sp. HTCC2601|Rep: Putative
hypothetical Gifsy-1 prophage protein - Roseovarius sp.
HTCC2601
Length = 376
Score = 33.1 bits (72), Expect = 7.5
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNG 629
+G S G + A + LR LG R D RWC V PNG
Sbjct: 160 SGPSAGGAVVGRANHGQVLRNLGCRGSGDARWCHVETPNG 199
>UniRef50_Q0C5E3 Cluster: Putative uncharacterized protein; n=1;
Hyphomonas neptunium ATCC 15444|Rep: Putative
uncharacterized protein - Hyphomonas neptunium (strain
ATCC 15444)
Length = 664
Score = 33.1 bits (72), Expect = 7.5
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = -2
Query: 737 SLDQRSRSTSLRSSAVIFSVQRPTNTFRMSRRRAVLAVRDANIAPA 600
SLD +R S R+ A+ FS+ R + SRR AVR + +A A
Sbjct: 249 SLDDLARDASGRTEALTFSISRVEDKLEHSRRTVDAAVRASEVAAA 294
>UniRef50_Q0AKQ5 Cluster: Redoxin domain protein precursor; n=1;
Maricaulis maris MCS10|Rep: Redoxin domain protein
precursor - Maricaulis maris (strain MCS10)
Length = 168
Score = 33.1 bits (72), Expect = 7.5
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +1
Query: 352 WCAFPRAESPPPRP-RCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTPPDYPKV 528
WCA AE P R + + GL W+ T EA + GD V V +D +
Sbjct: 66 WCAPCHAEHPVLMALRSEGIAIYGLNWRDTPEAANQFLDVLGD-PFVGVMQDDNNQSVRA 124
Query: 529 LASSNSPST 555
L +P T
Sbjct: 125 LGIEGAPET 133
>UniRef50_A0U7R7 Cluster: Putative uncharacterized protein; n=3;
Burkholderia cepacia complex|Rep: Putative
uncharacterized protein - Burkholderia cenocepacia MC0-3
Length = 778
Score = 33.1 bits (72), Expect = 7.5
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 290 AYASSTSACHHRRRAGRPTDIGVPSHARNRRRLD-HDAPIL 409
A+ A H RRAG D G H ++RRR+D HD L
Sbjct: 58 AFGMHARAQHEERRAGHAADDGRVGHRQHRRRIDQHDVVAL 98
>UniRef50_Q9M9E6 Cluster: F3F9.20; n=8; Arabidopsis thaliana|Rep:
F3F9.20 - Arabidopsis thaliana (Mouse-ear cress)
Length = 302
Score = 33.1 bits (72), Expect = 7.5
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRH-MIDGRWCDVRIPN-GKDGSSTAHSKG 662
TG SKG+GF+ F E ++ RA+ + +IDGR + I + G+ S +G
Sbjct: 54 TGKSKGYGFVTFRESDSATRAVADPNPVIDGRKANCNIASFGRPRPSPPRGRG 106
>UniRef50_Q40437 Cluster: RGP-3; n=2; Nicotiana|Rep: RGP-3 -
Nicotiana sylvestris (Wood tobacco)
Length = 144
Score = 33.1 bits (72), Expect = 7.5
Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Frame = +1
Query: 394 RC--SDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQV 495
RC + L V GL W T ++++RD F++FGD++ +V
Sbjct: 34 RCMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARV 69
>UniRef50_Q0DEI3 Cluster: Os06g0151100 protein; n=5; Oryza
sativa|Rep: Os06g0151100 protein - Oryza sativa subsp.
japonica (Rice)
Length = 443
Score = 33.1 bits (72), Expect = 7.5
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +2
Query: 581 PTHDRRALVRCSHPERQGRLVDGSFERYS 667
P HDRR+L R P R G +D F RY+
Sbjct: 188 PHHDRRSLFRPRSPPRHGASLDAEFTRYA 216
>UniRef50_Q8MS04 Cluster: RH49436p; n=9; Endopterygota|Rep: RH49436p
- Drosophila melanogaster (Fruit fly)
Length = 634
Score = 33.1 bits (72), Expect = 7.5
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +1
Query: 391 PRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
P L V GL W+T+ + +++YF+ FG + V + +D
Sbjct: 200 PAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKD 237
>UniRef50_Q5DH48 Cluster: SJCHGC06087 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06087 protein - Schistosoma
japonicum (Blood fluke)
Length = 390
Score = 33.1 bits (72), Expect = 7.5
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 373 ESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDT 507
++ P R + V G+ + TE+ +R+YFSSFG + + + DT
Sbjct: 133 KAKPSREPLRKIFVGGIDPEVTEDQIREYFSSFGKVESLDLPYDT 177
>UniRef50_Q4DDV5 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 879
Score = 33.1 bits (72), Expect = 7.5
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 382 PPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKR 501
PP L+V +P++ TE +RD FS+F ++ V++ R
Sbjct: 786 PPGCDALKLVVKNVPFEATERDIRDLFSAFSEIRSVRLPR 825
>UniRef50_Q6FSA7 Cluster: Candida glabrata strain CBS138 chromosome
H complete sequence; n=1; Candida glabrata|Rep: Candida
glabrata strain CBS138 chromosome H complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 555
Score = 33.1 bits (72), Expect = 7.5
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRH--MIDGRWCDVRIPNGKDGSST 647
TG+SKG+GF+KF Q RAL ++GR + I G + +++
Sbjct: 228 TGISKGYGFVKFKSSMDQQRALVEMQGCFLNGRAIKIGIAGGNNNNNS 275
>UniRef50_Q4PH97 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1077
Score = 33.1 bits (72), Expect = 7.5
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
R + P P + L V LP++ TEE +R+ F SFG L ++ D
Sbjct: 599 RPQLPAPEEGTT-LFVRNLPYQATEEELRNLFRSFGPLRYAKITMD 643
>UniRef50_UPI0000E806AC Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 104
Score = 32.7 bits (71), Expect = 9.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 394 RCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTPPDYPK 525
R D+ V +PW + + +++YFS FG + Q+ D + K
Sbjct: 13 RIFDIFVAEVPWTVSSKELKEYFSQFGSVQRCQLPFDKDTGFHK 56
>UniRef50_Q4RA72 Cluster: Chromosome undetermined SCAF24356, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF24356,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 196
Score = 32.7 bits (71), Expect = 9.9
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +2
Query: 563 TACIRPPTHDRRALVRCSHPERQGRL 640
TAC RPP DR +L CS P RL
Sbjct: 55 TACSRPPAPDRLSLTACSRPPAPDRL 80
>UniRef50_A4B4X2 Cluster: RNA-binding protein; n=1; Alteromonas
macleodii 'Deep ecotype'|Rep: RNA-binding protein -
Alteromonas macleodii 'Deep ecotype'
Length = 154
Score = 32.7 bits (71), Expect = 9.9
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
L V LP++ E AV++YFSSF ++ V++ +D
Sbjct: 74 LYVGNLPYRANENAVKEYFSSFIEVQSVRLMKD 106
>UniRef50_Q8W034 Cluster: Ribonucleoprotein 1; n=5; core
eudicotyledons|Rep: Ribonucleoprotein 1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 411
Score = 32.7 bits (71), Expect = 9.9
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVR 617
TG +GFGF+ F++ R L +H ID R DV+
Sbjct: 43 TGRPRGFGFVIFSDPSVLDRVLQEKHSIDTREVDVK 78
>UniRef50_A7QJF1 Cluster: Chromosome chr8 scaffold_106, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr8 scaffold_106, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 332
Score = 32.7 bits (71), Expect = 9.9
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRH--MIDGRWCDVRIPNGKDGS 641
TG +GFGFI FA++ A A+ H +DGR V K GS
Sbjct: 44 TGRPRGFGFITFADHRAMEDAIREMHGRELDGRVISVNKAQPKMGS 89
>UniRef50_A3AEN0 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 295
Score = 32.7 bits (71), Expect = 9.9
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVR 617
TG SKG+GF+KFA+ + RA+ ++G +C R
Sbjct: 67 TGRSKGYGFVKFADENEKNRAMTE---MNGMYCSTR 99
>UniRef50_A2XBX0 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 252
Score = 32.7 bits (71), Expect = 9.9
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKR 501
++ GLP+ TTE +R+ F FG L +Q+ R
Sbjct: 75 VVASGLPYTTTEAEIRELFERFGPLRSLQLSR 106
>UniRef50_A0E769 Cluster: Chromosome undetermined scaffold_80, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_80,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 208
Score = 32.7 bits (71), Expect = 9.9
Identities = 11/40 (27%), Positives = 25/40 (62%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTPPDYPK 525
+ V GLP K +++ + D+FS +G ++ +++ R+ + K
Sbjct: 113 IFVQGLPLKISDKEIVDFFSEYGTIVSIEIPRNEGSQFTK 152
>UniRef50_Q9NQU3 Cluster: Putative uncharacterized protein; n=1;
Homo sapiens|Rep: Putative uncharacterized protein -
Homo sapiens (Human)
Length = 93
Score = 32.7 bits (71), Expect = 9.9
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 310 RLSPPAEGWPAYRYWCAFPRAESPPPRP 393
R SPPA WP+ + WC P A+S P P
Sbjct: 11 RTSPPATPWPS-QAWCIDPHAQSLQPGP 37
>UniRef50_Q2H6T1 Cluster: Putative uncharacterized protein; n=4;
Sordariomycetes|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 792
Score = 32.7 bits (71), Expect = 9.9
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTPPDYP 522
L + LP+ TT+E ++ +F++FG + +V D D P
Sbjct: 355 LFIRNLPYSTTDETLKAHFATFGPVRYARVVMDRATDRP 393
>UniRef50_Q1DPW0 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 147
Score = 32.7 bits (71), Expect = 9.9
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 400 SDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
S L + GL W TT+E +R FS FG + V +D
Sbjct: 2 SKLFIGGLAWHTTDETLRQGFSKFGSIEEAIVVKD 36
>UniRef50_P48809 Cluster: Heterogeneous nuclear ribonucleoprotein
27C; n=11; Endopterygota|Rep: Heterogeneous nuclear
ribonucleoprotein 27C - Drosophila melanogaster (Fruit
fly)
Length = 421
Score = 32.7 bits (71), Expect = 9.9
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLL 483
L V GL W+TT+E + YF FGD++
Sbjct: 9 LFVGGLSWETTQENLSRYFCRFGDII 34
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 699,872,620
Number of Sequences: 1657284
Number of extensions: 14362554
Number of successful extensions: 51174
Number of sequences better than 10.0: 132
Number of HSP's better than 10.0 without gapping: 47818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51126
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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