Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30290
(750 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-4... 78 4e-14
EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1 ... 78 4e-14
EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein. 78 4e-14
CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein. 78 4e-14
BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein... 78 4e-14
BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein. 78 4e-14
AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein... 78 4e-14
AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein... 78 4e-14
AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein... 75 3e-13
EF434183-1|ABO32292.1| 260|Homo sapiens TDP43 splice variant 2 ... 55 2e-07
AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens ... 39 0.017
AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein. 39 0.022
AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein. 39 0.022
BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2 (Dros... 38 0.039
BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein ... 37 0.089
AY678451-1|AAV97647.1| 454|Homo sapiens DAZAP1/MEF2D fusion pro... 37 0.089
AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein ... 37 0.089
U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein. 35 0.27
M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein. 35 0.27
D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear rib... 35 0.27
D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear rib... 35 0.27
D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear rib... 35 0.27
D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear rib... 35 0.27
BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear r... 35 0.27
BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear r... 35 0.27
BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear r... 35 0.27
AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear r... 35 0.27
AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear r... 35 0.27
AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear r... 35 0.27
AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear r... 35 0.27
AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein. 35 0.27
D89678-1|BAA22860.1| 271|Homo sapiens A+U-rich element RNA bind... 35 0.36
D89092-1|BAA24361.1| 301|Homo sapiens hnRNP JKTBP protein. 35 0.36
CR407623-1|CAG28551.1| 420|Homo sapiens HNRPDL protein. 35 0.36
BC071944-1|AAH71944.1| 420|Homo sapiens heterogeneous nuclear r... 35 0.36
BC011714-1|AAH11714.1| 420|Homo sapiens heterogeneous nuclear r... 35 0.36
BC007392-1|AAH07392.2| 415|Homo sapiens HNRPDL protein protein. 35 0.36
AY453824-1|AAR17782.1| 298|Homo sapiens CArG binding factor pro... 35 0.36
AC124016-2|AAY40914.1| 420|Homo sapiens unknown protein. 35 0.36
AB066484-1|BAB62188.1| 244|Homo sapiens JKTBP1delta6 protein. 35 0.36
AB017019-1|BAA75241.1| 420|Homo sapiens JKTBP2 protein. 35 0.36
AB017018-2|BAA75240.1| 301|Homo sapiens JKTBP1 protein. 35 0.36
AB017018-1|BAA75239.1| 420|Homo sapiens JKTBP2 protein. 35 0.36
X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1 prot... 34 0.47
X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein. 34 0.47
X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP cor... 34 0.47
BC103707-1|AAI03708.1| 267|Homo sapiens HNRPA1 protein protein. 34 0.47
BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.47
BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.47
BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.47
BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein. 34 0.47
BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.47
BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.47
BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.47
BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.47
BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.47
U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein. 34 0.63
M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein pr... 34 0.63
BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear r... 34 0.63
BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear r... 34 0.63
BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear r... 34 0.63
BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear r... 34 0.63
BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear r... 34 0.63
AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear r... 34 0.63
AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens ... 34 0.63
AB073212-1|BAB70469.1| 179|Homo sapiens Musashi1 protein. 33 0.83
AB072592-1|BAB69769.1| 181|Homo sapiens Musashi1 protein. 33 0.83
AB072591-1|BAB69768.1| 181|Homo sapiens Musashi1 protein. 33 0.83
AB072590-1|BAB69767.1| 180|Homo sapiens Musashi1 protein. 33 0.83
U28686-1|AAB17212.1| 157|Homo sapiens RNPL protein. 33 1.1
BC006825-1|AAH06825.1| 157|Homo sapiens RNA binding motif (RNP1... 33 1.1
AF277292-1|AAF97236.1| 93|Homo sapiens unknown protein. 33 1.4
X75315-1|CAA53064.1| 230|Homo sapiens SEB4B protein. 32 1.9
X75314-1|CAA53063.1| 229|Homo sapiens SEB4D protein. 32 1.9
BC018711-1|AAH18711.1| 216|Homo sapiens RBM38 protein protein. 32 1.9
AF432218-1|AAL99924.1| 216|Homo sapiens CLL-associated antigen ... 32 1.9
U09123-1|AAB60650.1| 341|Homo sapiens hnRNP protein A2 protein. 32 2.5
M29065-1|AAA36574.1| 341|Homo sapiens protein ( Human hnRNP A2 ... 32 2.5
M29064-1|AAA60271.1| 353|Homo sapiens SNRPB1 protein. 32 2.5
EF432052-1|ABO28524.1| 643|Homo sapiens candidate growth-relate... 32 2.5
D28877-2|BAA06032.1| 341|Homo sapiens hnRNP A2 protein protein. 32 2.5
D28877-1|BAA06031.1| 353|Homo sapiens hnRNP B1 protein protein. 32 2.5
BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein... 32 2.5
BC024178-1|AAH24178.1| 643|Homo sapiens ENOX1 protein protein. 32 2.5
BC000506-1|AAH00506.3| 249|Homo sapiens HNRPA2B1 protein protein. 32 2.5
AY513282-1|AAT08035.1| 643|Homo sapiens proliferation-inducing ... 32 2.5
AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein... 32 2.5
AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein... 32 2.5
AL627430-1|CAH72199.2| 643|Homo sapiens novel protein protein. 32 2.5
AL607148-1|CAH70584.2| 643|Homo sapiens novel protein protein. 32 2.5
AL138823-2|CAI16283.2| 643|Homo sapiens novel protein protein. 32 2.5
AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein pr... 32 2.5
AK000956-1|BAA91442.1| 643|Homo sapiens protein ( Homo sapiens ... 32 2.5
AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein... 32 2.5
BC039879-1|AAH39879.1| 177|Homo sapiens TRSPAP1 protein protein. 31 3.3
BC000680-1|AAH00680.1| 287|Homo sapiens tRNA selenocysteine ass... 31 3.3
AL513497-3|CAI22288.1| 287|Homo sapiens tRNA selenocysteine ass... 31 3.3
AK000510-1|BAA91217.1| 287|Homo sapiens protein ( Homo sapiens ... 31 3.3
X03910-1|CAA27544.1| 225|Homo sapiens protein ( Human mRNA for ... 31 4.4
AF087905-1|AAP97203.1| 425|Homo sapiens splicing factor SF2 pro... 30 7.7
>U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-43
protein.
Length = 414
Score = 77.8 bits (183), Expect = 4e-14
Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Frame = +1
Query: 394 RCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTPPDYPK--VLASSNSPSTKLNC 567
+ SDLIVLGLPWKTTE+ +++YFS+FG++LMVQVK+D + K T++
Sbjct: 102 KTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKV 161
Query: 568 VH*XXXXXXXXXXXMFASXXXXXXXXXLIRKVFVGRCTENITAEDLRE 711
+ + RKVFVGRCTE++T ++LRE
Sbjct: 162 MSQRHMIDGRWCDCKLPNSKQSQDEPLRSRKVFVGRCTEDMTEDELRE 209
Score = 70.9 bits (166), Expect = 4e-12
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGK 632
TG SKGFGF++F EYE Q++ + +RHMIDGRWCD ++PN K
Sbjct: 141 TGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSK 181
Score = 55.2 bits (127), Expect = 2e-07
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +2
Query: 140 MTEYVPVSEGEQDEPIELPTEEDGSLLLSTVAAQF 244
M+EY+ V+E E DEPIE+P+E+DG++LLSTV AQF
Sbjct: 1 MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQF 35
>EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1
protein.
Length = 414
Score = 77.8 bits (183), Expect = 4e-14
Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Frame = +1
Query: 394 RCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTPPDYPK--VLASSNSPSTKLNC 567
+ SDLIVLGLPWKTTE+ +++YFS+FG++LMVQVK+D + K T++
Sbjct: 102 KTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKV 161
Query: 568 VH*XXXXXXXXXXXMFASXXXXXXXXXLIRKVFVGRCTENITAEDLRE 711
+ + RKVFVGRCTE++T ++LRE
Sbjct: 162 MSQRHMIDGRWCDCKLPNSKQSQDEPLRSRKVFVGRCTEDMTEDELRE 209
Score = 70.9 bits (166), Expect = 4e-12
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGK 632
TG SKGFGF++F EYE Q++ + +RHMIDGRWCD ++PN K
Sbjct: 141 TGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSK 181
Score = 55.2 bits (127), Expect = 2e-07
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +2
Query: 140 MTEYVPVSEGEQDEPIELPTEEDGSLLLSTVAAQF 244
M+EY+ V+E E DEPIE+P+E+DG++LLSTV AQF
Sbjct: 1 MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQF 35
>EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein.
Length = 416
Score = 77.8 bits (183), Expect = 4e-14
Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Frame = +1
Query: 394 RCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTPPDYPK--VLASSNSPSTKLNC 567
+ SDLIVLGLPWKTTE+ +++YFS+FG++LMVQVK+D + K T++
Sbjct: 102 KTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKV 161
Query: 568 VH*XXXXXXXXXXXMFASXXXXXXXXXLIRKVFVGRCTENITAEDLRE 711
+ + RKVFVGRCTE++T ++LRE
Sbjct: 162 MSQRHMIDGRWCDCKLPNSKQSQDEPLRSRKVFVGRCTEDMTEDELRE 209
Score = 70.9 bits (166), Expect = 4e-12
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGK 632
TG SKGFGF++F EYE Q++ + +RHMIDGRWCD ++PN K
Sbjct: 141 TGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSK 181
Score = 55.2 bits (127), Expect = 2e-07
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +2
Query: 140 MTEYVPVSEGEQDEPIELPTEEDGSLLLSTVAAQF 244
M+EY+ V+E E DEPIE+P+E+DG++LLSTV AQF
Sbjct: 1 MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQF 35
>CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein.
Length = 414
Score = 77.8 bits (183), Expect = 4e-14
Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Frame = +1
Query: 394 RCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTPPDYPK--VLASSNSPSTKLNC 567
+ SDLIVLGLPWKTTE+ +++YFS+FG++LMVQVK+D + K T++
Sbjct: 102 KTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKV 161
Query: 568 VH*XXXXXXXXXXXMFASXXXXXXXXXLIRKVFVGRCTENITAEDLRE 711
+ + RKVFVGRCTE++T ++LRE
Sbjct: 162 MSQRHMIDGRWCDCKLPNSKQSQDEPLRSRKVFVGRCTEDMTEDELRE 209
Score = 70.9 bits (166), Expect = 4e-12
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGK 632
TG SKGFGF++F EYE Q++ + +RHMIDGRWCD ++PN K
Sbjct: 141 TGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSK 181
Score = 55.2 bits (127), Expect = 2e-07
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +2
Query: 140 MTEYVPVSEGEQDEPIELPTEEDGSLLLSTVAAQF 244
M+EY+ V+E E DEPIE+P+E+DG++LLSTV AQF
Sbjct: 1 MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQF 35
>BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 77.8 bits (183), Expect = 4e-14
Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Frame = +1
Query: 394 RCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTPPDYPK--VLASSNSPSTKLNC 567
+ SDLIVLGLPWKTTE+ +++YFS+FG++LMVQVK+D + K T++
Sbjct: 102 KTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKV 161
Query: 568 VH*XXXXXXXXXXXMFASXXXXXXXXXLIRKVFVGRCTENITAEDLRE 711
+ + RKVFVGRCTE++T ++LRE
Sbjct: 162 MSQRHMIDGRWCDCKLPNSKQSQDEPLRSRKVFVGRCTEDMTEDELRE 209
Score = 70.9 bits (166), Expect = 4e-12
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGK 632
TG SKGFGF++F EYE Q++ + +RHMIDGRWCD ++PN K
Sbjct: 141 TGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSK 181
Score = 55.2 bits (127), Expect = 2e-07
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +2
Query: 140 MTEYVPVSEGEQDEPIELPTEEDGSLLLSTVAAQF 244
M+EY+ V+E E DEPIE+P+E+DG++LLSTV AQF
Sbjct: 1 MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQF 35
>BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein.
Length = 414
Score = 77.8 bits (183), Expect = 4e-14
Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Frame = +1
Query: 394 RCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTPPDYPK--VLASSNSPSTKLNC 567
+ SDLIVLGLPWKTTE+ +++YFS+FG++LMVQVK+D + K T++
Sbjct: 102 KTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKV 161
Query: 568 VH*XXXXXXXXXXXMFASXXXXXXXXXLIRKVFVGRCTENITAEDLRE 711
+ + RKVFVGRCTE++T ++LRE
Sbjct: 162 MSQRHMIDGRWCDCKLPNSKQSQDEPLRSRKVFVGRCTEDMTEDELRE 209
Score = 70.9 bits (166), Expect = 4e-12
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGK 632
TG SKGFGF++F EYE Q++ + +RHMIDGRWCD ++PN K
Sbjct: 141 TGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSK 181
Score = 55.2 bits (127), Expect = 2e-07
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +2
Query: 140 MTEYVPVSEGEQDEPIELPTEEDGSLLLSTVAAQF 244
M+EY+ V+E E DEPIE+P+E+DG++LLSTV AQF
Sbjct: 1 MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQF 35
>AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein
protein.
Length = 295
Score = 77.8 bits (183), Expect = 4e-14
Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Frame = +1
Query: 394 RCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTPPDYPK--VLASSNSPSTKLNC 567
+ SDLIVLGLPWKTTE+ +++YFS+FG++LMVQVK+D + K T++
Sbjct: 102 KTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKV 161
Query: 568 VH*XXXXXXXXXXXMFASXXXXXXXXXLIRKVFVGRCTENITAEDLRE 711
+ + RKVFVGRCTE++T ++LRE
Sbjct: 162 MSQRHMIDGRWCDCKLPNSKQSQDEPLRSRKVFVGRCTEDMTEDELRE 209
Score = 70.9 bits (166), Expect = 4e-12
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGK 632
TG SKGFGF++F EYE Q++ + +RHMIDGRWCD ++PN K
Sbjct: 141 TGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSK 181
Score = 55.2 bits (127), Expect = 2e-07
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +2
Query: 140 MTEYVPVSEGEQDEPIELPTEEDGSLLLSTVAAQF 244
M+EY+ V+E E DEPIE+P+E+DG++LLSTV AQF
Sbjct: 1 MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQF 35
>AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 77.8 bits (183), Expect = 4e-14
Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Frame = +1
Query: 394 RCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTPPDYPK--VLASSNSPSTKLNC 567
+ SDLIVLGLPWKTTE+ +++YFS+FG++LMVQVK+D + K T++
Sbjct: 102 KTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKV 161
Query: 568 VH*XXXXXXXXXXXMFASXXXXXXXXXLIRKVFVGRCTENITAEDLRE 711
+ + RKVFVGRCTE++T ++LRE
Sbjct: 162 MSQRHMIDGRWCDCKLPNSKQSQDEPLRSRKVFVGRCTEDMTEDELRE 209
Score = 70.9 bits (166), Expect = 4e-12
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGK 632
TG SKGFGF++F EYE Q++ + +RHMIDGRWCD ++PN K
Sbjct: 141 TGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSK 181
Score = 55.2 bits (127), Expect = 2e-07
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +2
Query: 140 MTEYVPVSEGEQDEPIELPTEEDGSLLLSTVAAQF 244
M+EY+ V+E E DEPIE+P+E+DG++LLSTV AQF
Sbjct: 1 MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQF 35
>AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein
variant protein.
Length = 414
Score = 74.9 bits (176), Expect = 3e-13
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Frame = +1
Query: 394 RCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTPPDYPK--VLASSNSPSTKLNC 567
+ SDLIVLGLPWKTTE+ +++YFS+FG++LMVQVK+D + K T++
Sbjct: 102 KTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKV 161
Query: 568 VH*XXXXXXXXXXXMFASXXXXXXXXXLIRKVFVGRCTENITAEDLRE 711
+ + RKVFVGRCT ++T ++LRE
Sbjct: 162 MSQRHMIDGRWCDCKLPNSKQSQDEPLRSRKVFVGRCTGDMTEDELRE 209
Score = 70.9 bits (166), Expect = 4e-12
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGK 632
TG SKGFGF++F EYE Q++ + +RHMIDGRWCD ++PN K
Sbjct: 141 TGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSK 181
Score = 55.2 bits (127), Expect = 2e-07
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +2
Query: 140 MTEYVPVSEGEQDEPIELPTEEDGSLLLSTVAAQF 244
M+EY+ V+E E DEPIE+P+E+DG++LLSTV AQF
Sbjct: 1 MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQF 35
>EF434183-1|ABO32292.1| 260|Homo sapiens TDP43 splice variant 2
protein.
Length = 260
Score = 55.2 bits (127), Expect = 2e-07
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +2
Query: 140 MTEYVPVSEGEQDEPIELPTEEDGSLLLSTVAAQF 244
M+EY+ V+E E DEPIE+P+E+DG++LLSTV AQF
Sbjct: 1 MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQF 35
>AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ36569 fis, clone TRACH2010824, highly similar to
Ribonucleoprotein. ).
Length = 251
Score = 39.1 bits (87), Expect = 0.017
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +1
Query: 400 SDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
S + + GL W+T+ +++RDYFS FG++ V RD
Sbjct: 17 SKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRD 51
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +1
Query: 358 AFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFG 474
AFPR P R + V GL T E V+ YF FG
Sbjct: 92 AFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFG 130
>AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein.
Length = 362
Score = 38.7 bits (86), Expect = 0.022
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 364 PRAESPP-PRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
P SP P C + + GL W+TT+E +R+YF FG++ V RD
Sbjct: 8 PGLASPDSPHDPCK-MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRD 54
Score = 33.5 bits (73), Expect = 0.83
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +1
Query: 358 AFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFG 474
AFPR P R + V GL TT E V+ YF FG
Sbjct: 95 AFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFG 133
>AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein.
Length = 362
Score = 38.7 bits (86), Expect = 0.022
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 364 PRAESPP-PRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
P SP P C + + GL W+TT+E +R+YF FG++ V RD
Sbjct: 8 PGLASPDSPHDPCK-MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRD 54
Score = 33.5 bits (73), Expect = 0.83
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +1
Query: 358 AFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFG 474
AFPR P R + V GL TT E V+ YF FG
Sbjct: 95 AFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFG 133
>BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2
(Drosophila) protein.
Length = 328
Score = 37.9 bits (84), Expect = 0.039
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ + GL W+T+ +++RDYFS FG++ V RD
Sbjct: 23 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRD 55
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +1
Query: 358 AFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFG 474
AFPR P R + V GL T E V+ YF FG
Sbjct: 96 AFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFG 134
>BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 36.7 bits (81), Expect = 0.089
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
L V GL W TT+E +R YFS +G+++ + +D
Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKD 44
Score = 30.7 bits (66), Expect = 5.8
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVR--IPNGKDGSSTAHSKG 662
T S+GFGF+KF + L R H +DGR D + P G T +G
Sbjct: 47 TNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEG 100
>AY678451-1|AAV97647.1| 454|Homo sapiens DAZAP1/MEF2D fusion
protein protein.
Length = 454
Score = 36.7 bits (81), Expect = 0.089
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
L V GL W TT+E +R YFS +G+++ + +D
Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKD 44
Score = 30.7 bits (66), Expect = 5.8
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVR--IPNGKDGSSTAHSKG 662
T S+GFGF+KF + L R H +DGR D + P G T +G
Sbjct: 47 TNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEG 100
>AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 36.7 bits (81), Expect = 0.089
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
L V GL W TT+E +R YFS +G+++ + +D
Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKD 44
Score = 31.5 bits (68), Expect = 3.3
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVR--IPNGKDGSSTAHSKGIRRPLY 680
T S+GFGF+KF + L R H +DGR D + P G T +G ++
Sbjct: 47 TNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPR 106
Query: 681 GEY 689
+Y
Sbjct: 107 SDY 109
>U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein.
Length = 286
Score = 35.1 bits (77), Expect = 0.27
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ + GL W TT++ ++DYFS FG+++ +K D
Sbjct: 78 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLD 110
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
RA++ + + V GL T EE +R+YF FG++ +++ D
Sbjct: 150 RAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 195
>M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein.
Length = 328
Score = 35.1 bits (77), Expect = 0.27
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ + GL W TT++ ++DYFS FG+++ +K D
Sbjct: 78 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLD 110
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
RA++ + + V GL T EE +R+YF FG++ +++ D
Sbjct: 150 RAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 195
>D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 355
Score = 35.1 bits (77), Expect = 0.27
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ + GL W TT++ ++DYFS FG+++ +K D
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLD 131
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
RA++ + + V GL T EE +R+YF FG++ +++ D
Sbjct: 171 RAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 216
>D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 215
Score = 35.1 bits (77), Expect = 0.27
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ + GL W TT++ ++DYFS FG+++ +K D
Sbjct: 8 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLD 40
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
RA++ + + V GL T EE +R+YF FG++ +++ D
Sbjct: 80 RAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 125
>D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 306
Score = 35.1 bits (77), Expect = 0.27
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ + GL W TT++ ++DYFS FG+++ +K D
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLD 131
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
RA++ + + V GL T EE +R+YF FG++ +++ D
Sbjct: 171 RAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 216
>D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 267
Score = 35.1 bits (77), Expect = 0.27
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ + GL W TT++ ++DYFS FG+++ +K D
Sbjct: 11 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLD 43
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
RA++ + + V GL T EE +R+YF FG++ +++ D
Sbjct: 83 RAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 128
>BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 35.1 bits (77), Expect = 0.27
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ + GL W TT++ ++DYFS FG+++ +K D
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLD 131
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
RA++ + + V GL T EE +R+YF FG++ +++ D
Sbjct: 171 RAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 216
>BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 35.1 bits (77), Expect = 0.27
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ + GL W TT++ ++DYFS FG+++ +K D
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLD 131
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
RA++ + + V GL T EE +R+YF FG++ +++ D
Sbjct: 171 RAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 216
>BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 355
Score = 35.1 bits (77), Expect = 0.27
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ + GL W TT++ ++DYFS FG+++ +K D
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLD 131
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
RA++ + + V GL T EE +R+YF FG++ +++ D
Sbjct: 171 RAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 216
>AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear
ribonucleoprotein D0B protein.
Length = 298
Score = 35.1 bits (77), Expect = 0.27
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ + GL W TT++ ++DYFS FG+++ +K D
Sbjct: 91 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLD 123
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
RA++ + + V GL T EE +R+YF FG++ +++ D
Sbjct: 163 RAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 208
>AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 336
Score = 35.1 bits (77), Expect = 0.27
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ + GL W TT++ ++DYFS FG+++ +K D
Sbjct: 80 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLD 112
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
RA++ + + V GL T EE +R+YF FG++ +++ D
Sbjct: 152 RAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 197
>AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 306
Score = 35.1 bits (77), Expect = 0.27
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ + GL W TT++ ++DYFS FG+++ +K D
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLD 131
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
RA++ + + V GL T EE +R+YF FG++ +++ D
Sbjct: 171 RAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 216
>AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 355
Score = 35.1 bits (77), Expect = 0.27
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ + GL W TT++ ++DYFS FG+++ +K D
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLD 131
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
RA++ + + V GL T EE +R+YF FG++ +++ D
Sbjct: 171 RAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 216
>AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein.
Length = 355
Score = 35.1 bits (77), Expect = 0.27
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ + GL W TT++ ++DYFS FG+++ +K D
Sbjct: 99 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLD 131
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
RA++ + + V GL T EE +R+YF FG++ +++ D
Sbjct: 171 RAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 216
>D89678-1|BAA22860.1| 271|Homo sapiens A+U-rich element RNA binding
factor protein.
Length = 271
Score = 34.7 bits (76), Expect = 0.36
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 420 LTMEDDRRSCTRLLLLLWRFADGSSKTRYATGLSKGFGFIKFAEYEAQLRALG-RRHMID 596
L+ + ++ T L D + KT TG S+GFGF+ F + + + L + H +D
Sbjct: 6 LSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLD 65
Query: 597 GRWCD 611
G+ D
Sbjct: 66 GKLID 70
Score = 31.1 bits (67), Expect = 4.4
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDT 507
+ V GL T+EE +++YF +FG++ +++ DT
Sbjct: 86 VFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDT 119
>D89092-1|BAA24361.1| 301|Homo sapiens hnRNP JKTBP protein.
Length = 301
Score = 34.7 bits (76), Expect = 0.36
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 420 LTMEDDRRSCTRLLLLLWRFADGSSKTRYATGLSKGFGFIKFAEYEAQLRALG-RRHMID 596
L+ + ++ T L D + KT TG S+GFGF+ F + + + L + H +D
Sbjct: 36 LSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLD 95
Query: 597 GRWCD 611
G+ D
Sbjct: 96 GKLID 100
Score = 31.1 bits (67), Expect = 4.4
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDT 507
+ V GL T+EE +++YF +FG++ +++ DT
Sbjct: 116 VFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDT 149
>CR407623-1|CAG28551.1| 420|Homo sapiens HNRPDL protein.
Length = 420
Score = 34.7 bits (76), Expect = 0.36
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 420 LTMEDDRRSCTRLLLLLWRFADGSSKTRYATGLSKGFGFIKFAEYEAQLRALG-RRHMID 596
L+ + ++ T L D + KT TG S+GFGF+ F + + + L + H +D
Sbjct: 155 LSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLD 214
Query: 597 GRWCD 611
G+ D
Sbjct: 215 GKLID 219
Score = 31.1 bits (67), Expect = 4.4
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDT 507
+ V GL T+EE +++YF +FG++ +++ DT
Sbjct: 235 VFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDT 268
>BC071944-1|AAH71944.1| 420|Homo sapiens heterogeneous nuclear
ribonucleoprotein D-like protein.
Length = 420
Score = 34.7 bits (76), Expect = 0.36
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 420 LTMEDDRRSCTRLLLLLWRFADGSSKTRYATGLSKGFGFIKFAEYEAQLRALG-RRHMID 596
L+ + ++ T L D + KT TG S+GFGF+ F + + + L + H +D
Sbjct: 155 LSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLD 214
Query: 597 GRWCD 611
G+ D
Sbjct: 215 GKLID 219
Score = 31.1 bits (67), Expect = 4.4
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDT 507
+ V GL T+EE +++YF +FG++ +++ DT
Sbjct: 235 VFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDT 268
>BC011714-1|AAH11714.1| 420|Homo sapiens heterogeneous nuclear
ribonucleoprotein D-like protein.
Length = 420
Score = 34.7 bits (76), Expect = 0.36
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 420 LTMEDDRRSCTRLLLLLWRFADGSSKTRYATGLSKGFGFIKFAEYEAQLRALG-RRHMID 596
L+ + ++ T L D + KT TG S+GFGF+ F + + + L + H +D
Sbjct: 155 LSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLD 214
Query: 597 GRWCD 611
G+ D
Sbjct: 215 GKLID 219
Score = 31.1 bits (67), Expect = 4.4
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDT 507
+ V GL T+EE +++YF +FG++ +++ DT
Sbjct: 235 VFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDT 268
>BC007392-1|AAH07392.2| 415|Homo sapiens HNRPDL protein protein.
Length = 415
Score = 34.7 bits (76), Expect = 0.36
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 420 LTMEDDRRSCTRLLLLLWRFADGSSKTRYATGLSKGFGFIKFAEYEAQLRALG-RRHMID 596
L+ + ++ T L D + KT TG S+GFGF+ F + + + L + H +D
Sbjct: 150 LSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLD 209
Query: 597 GRWCD 611
G+ D
Sbjct: 210 GKLID 214
Score = 31.1 bits (67), Expect = 4.4
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDT 507
+ V GL T+EE +++YF +FG++ +++ DT
Sbjct: 230 VFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDT 263
>AY453824-1|AAR17782.1| 298|Homo sapiens CArG binding factor
protein.
Length = 298
Score = 34.7 bits (76), Expect = 0.36
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 420 LTMEDDRRSCTRLLLLLWRFADGSSKTRYATGLSKGFGFIKFAEYEAQLRALG-RRHMID 596
L+ + ++ T L D + KT TG S+GFGF+ F + + + L + H +D
Sbjct: 33 LSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLD 92
Query: 597 GRWCD 611
G+ D
Sbjct: 93 GKLID 97
Score = 31.1 bits (67), Expect = 4.4
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDT 507
+ V GL T+EE +++YF +FG++ +++ DT
Sbjct: 113 VFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDT 146
>AC124016-2|AAY40914.1| 420|Homo sapiens unknown protein.
Length = 420
Score = 34.7 bits (76), Expect = 0.36
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 420 LTMEDDRRSCTRLLLLLWRFADGSSKTRYATGLSKGFGFIKFAEYEAQLRALG-RRHMID 596
L+ + ++ T L D + KT TG S+GFGF+ F + + + L + H +D
Sbjct: 155 LSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLD 214
Query: 597 GRWCD 611
G+ D
Sbjct: 215 GKLID 219
Score = 31.1 bits (67), Expect = 4.4
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDT 507
+ V GL T+EE +++YF +FG++ +++ DT
Sbjct: 235 VFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDT 268
>AB066484-1|BAB62188.1| 244|Homo sapiens JKTBP1delta6 protein.
Length = 244
Score = 34.7 bits (76), Expect = 0.36
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 420 LTMEDDRRSCTRLLLLLWRFADGSSKTRYATGLSKGFGFIKFAEYEAQLRALG-RRHMID 596
L+ + ++ T L D + KT TG S+GFGF+ F + + + L + H +D
Sbjct: 36 LSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLD 95
Query: 597 GRWCD 611
G+ D
Sbjct: 96 GKLID 100
Score = 31.1 bits (67), Expect = 4.4
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDT 507
+ V GL T+EE +++YF +FG++ +++ DT
Sbjct: 116 VFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDT 149
>AB017019-1|BAA75241.1| 420|Homo sapiens JKTBP2 protein.
Length = 420
Score = 34.7 bits (76), Expect = 0.36
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 420 LTMEDDRRSCTRLLLLLWRFADGSSKTRYATGLSKGFGFIKFAEYEAQLRALG-RRHMID 596
L+ + ++ T L D + KT TG S+GFGF+ F + + + L + H +D
Sbjct: 155 LSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLD 214
Query: 597 GRWCD 611
G+ D
Sbjct: 215 GKLID 219
Score = 31.1 bits (67), Expect = 4.4
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDT 507
+ V GL T+EE +++YF +FG++ +++ DT
Sbjct: 235 VFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDT 268
>AB017018-2|BAA75240.1| 301|Homo sapiens JKTBP1 protein.
Length = 301
Score = 34.7 bits (76), Expect = 0.36
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 420 LTMEDDRRSCTRLLLLLWRFADGSSKTRYATGLSKGFGFIKFAEYEAQLRALG-RRHMID 596
L+ + ++ T L D + KT TG S+GFGF+ F + + + L + H +D
Sbjct: 36 LSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLD 95
Query: 597 GRWCD 611
G+ D
Sbjct: 96 GKLID 100
Score = 31.1 bits (67), Expect = 4.4
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDT 507
+ V GL T+EE +++YF +FG++ +++ DT
Sbjct: 116 VFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDT 149
>AB017018-1|BAA75239.1| 420|Homo sapiens JKTBP2 protein.
Length = 420
Score = 34.7 bits (76), Expect = 0.36
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 420 LTMEDDRRSCTRLLLLLWRFADGSSKTRYATGLSKGFGFIKFAEYEAQLRALG-RRHMID 596
L+ + ++ T L D + KT TG S+GFGF+ F + + + L + H +D
Sbjct: 155 LSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLD 214
Query: 597 GRWCD 611
G+ D
Sbjct: 215 GKLID 219
Score = 31.1 bits (67), Expect = 4.4
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDT 507
+ V GL T+EE +++YF +FG++ +++ DT
Sbjct: 235 VFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDT 268
>X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1
protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.47
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
++ESP + L + GL ++TT+E++R +F +G L V RD
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRD 48
>X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.47
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
++ESP + L + GL ++TT+E++R +F +G L V RD
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRD 48
>X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP core
protein A1. ).
Length = 320
Score = 34.3 bits (75), Expect = 0.47
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
++ESP + L + GL ++TT+E++R +F +G L V RD
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRD 48
>BC103707-1|AAI03708.1| 267|Homo sapiens HNRPA1 protein protein.
Length = 267
Score = 34.3 bits (75), Expect = 0.47
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
++ESP + L + GL ++TT+E++R +F +G L V RD
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRD 48
>BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.47
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
++ESP + L + GL ++TT+E++R +F +G L V RD
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRD 48
>BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.47
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
++ESP + L + GL ++TT+E++R +F +G L V RD
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRD 48
>BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.47
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
++ESP + L + GL ++TT+E++R +F +G L V RD
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRD 48
>BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.47
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
++ESP + L + GL ++TT+E++R +F +G L V RD
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRD 48
>BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.47
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
++ESP + L + GL ++TT+E++R +F +G L V RD
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRD 48
>BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.47
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
++ESP + L + GL ++TT+E++R +F +G L V RD
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRD 48
>BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.47
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
++ESP + L + GL ++TT+E++R +F +G L V RD
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRD 48
>BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.47
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
++ESP + L + GL ++TT+E++R +F +G L V RD
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRD 48
>BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.47
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
++ESP + L + GL ++TT+E++R +F +G L V RD
Sbjct: 3 KSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRD 48
>U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein.
Length = 331
Score = 33.9 bits (74), Expect = 0.63
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ V GL W T+++ ++DYF+ FG+++ +K D
Sbjct: 70 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMD 102
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCD 611
TG S+GFGFI F + + + L ++ H +DGR D
Sbjct: 105 TGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID 139
>M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein
protein.
Length = 284
Score = 33.9 bits (74), Expect = 0.63
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ V GL W T+++ ++DYF+ FG+++ +K D
Sbjct: 70 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMD 102
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCD 611
TG S+GFGFI F + + + L ++ H +DGR D
Sbjct: 105 TGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID 139
>BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 332
Score = 33.9 bits (74), Expect = 0.63
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ V GL W T+++ ++DYF+ FG+++ +K D
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMD 104
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCD 611
TG S+GFGFI F + + + L ++ H +DGR D
Sbjct: 107 TGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID 141
Score = 30.7 bits (66), Expect = 5.8
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ V GL + TEE +R+YF FG++ +++ D
Sbjct: 156 IFVGGLNPEATEEKIREYFGEFGEIEAIELPMD 188
>BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 33.9 bits (74), Expect = 0.63
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ V GL W T+++ ++DYF+ FG+++ +K D
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMD 104
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCD 611
TG S+GFGFI F + + + L ++ H +DGR D
Sbjct: 107 TGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID 141
Score = 30.7 bits (66), Expect = 5.8
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ V GL + TEE +R+YF FG++ +++ D
Sbjct: 156 IFVGGLNPEATEEKIREYFGEFGEIEAIELPMD 188
>BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 33.9 bits (74), Expect = 0.63
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ V GL W T+++ ++DYF+ FG+++ +K D
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMD 104
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCD 611
TG S+GFGFI F + + + L ++ H +DGR D
Sbjct: 107 TGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID 141
Score = 30.7 bits (66), Expect = 5.8
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ V GL + TEE +R+YF FG++ +++ D
Sbjct: 156 IFVGGLNPEATEEKIREYFGEFGEIEAIELPMD 188
>BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 33.9 bits (74), Expect = 0.63
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ V GL W T+++ ++DYF+ FG+++ +K D
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMD 104
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCD 611
TG S+GFGFI F + + + L ++ H +DGR D
Sbjct: 107 TGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID 141
Score = 30.7 bits (66), Expect = 5.8
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ V GL + TEE +R+YF FG++ +++ D
Sbjct: 156 IFVGGLNPEATEEKIREYFGEFGEIEAIELPMD 188
>BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 33.9 bits (74), Expect = 0.63
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ V GL W T+++ ++DYF+ FG+++ +K D
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMD 104
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCD 611
TG S+GFGFI F + + + L ++ H +DGR D
Sbjct: 107 TGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID 141
Score = 30.7 bits (66), Expect = 5.8
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ V GL + TEE +R+YF FG++ +++ D
Sbjct: 156 IFVGGLNPEATEEKIREYFGEFGEIEAIELPMD 188
>AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein AB isoform a variant protein.
Length = 332
Score = 33.9 bits (74), Expect = 0.63
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ V GL W T+++ ++DYF+ FG+++ +K D
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMD 104
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCD 611
TG S+GFGFI F + + + L ++ H +DGR D
Sbjct: 107 TGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID 141
Score = 30.7 bits (66), Expect = 5.8
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ V GL + TEE +R+YF FG++ +++ D
Sbjct: 156 IFVGGLNPEATEEKIREYFGEFGEIEAIELPMD 188
>AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens
cDNA FLJ40338 fis, clone TESTI2032067, highly similar to
Rattus norvegicus mRNA for type A/B hnRNP protein p40.
).
Length = 332
Score = 33.9 bits (74), Expect = 0.63
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ V GL W T+++ ++DYF+ FG+++ +K D
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMD 104
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCD 611
TG S+GFGFI F + + + L ++ H +DGR D
Sbjct: 107 TGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID 141
Score = 30.7 bits (66), Expect = 5.8
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
+ V GL + TEE +R+YF FG++ +++ D
Sbjct: 156 IFVGGLNPEATEEKIREYFGEFGEIEAIELPMD 188
>AB073212-1|BAB70469.1| 179|Homo sapiens Musashi1 protein.
Length = 179
Score = 33.5 bits (73), Expect = 0.83
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +1
Query: 358 AFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFG 474
AFPR P R + V GL TT E V+ YF FG
Sbjct: 29 AFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFG 67
>AB072592-1|BAB69769.1| 181|Homo sapiens Musashi1 protein.
Length = 181
Score = 33.5 bits (73), Expect = 0.83
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +1
Query: 358 AFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFG 474
AFPR P R + V GL TT E V+ YF FG
Sbjct: 32 AFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFG 70
>AB072591-1|BAB69768.1| 181|Homo sapiens Musashi1 protein.
Length = 181
Score = 33.5 bits (73), Expect = 0.83
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +1
Query: 358 AFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFG 474
AFPR P R + V GL TT E V+ YF FG
Sbjct: 32 AFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFG 70
>AB072590-1|BAB69767.1| 180|Homo sapiens Musashi1 protein.
Length = 180
Score = 33.5 bits (73), Expect = 0.83
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +1
Query: 358 AFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFG 474
AFPR P R + V GL TT E V+ YF FG
Sbjct: 32 AFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFG 70
>U28686-1|AAB17212.1| 157|Homo sapiens RNPL protein.
Length = 157
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
L V GL + T E+A+ D+FSSFG + V V +D
Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKD 40
>BC006825-1|AAH06825.1| 157|Homo sapiens RNA binding motif (RNP1,
RRM) protein 3 protein.
Length = 157
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
L V GL + T E+A+ D+FSSFG + V V +D
Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKD 40
>AF277292-1|AAF97236.1| 93|Homo sapiens unknown protein.
Length = 93
Score = 32.7 bits (71), Expect = 1.4
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 310 RLSPPAEGWPAYRYWCAFPRAESPPPRP 393
R SPPA WP+ + WC P A+S P P
Sbjct: 11 RTSPPATPWPS-QAWCIDPHAQSLQPGP 37
>X75315-1|CAA53064.1| 230|Homo sapiens SEB4B protein.
Length = 230
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDL 480
+ V GLP+ TT+ ++R YF FGD+
Sbjct: 27 IFVGGLPYHTTDASLRKYFEGFGDI 51
>X75314-1|CAA53063.1| 229|Homo sapiens SEB4D protein.
Length = 229
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDL 480
+ V GLP+ TT+ ++R YF FGD+
Sbjct: 26 IFVGGLPYHTTDASLRKYFEGFGDI 50
>BC018711-1|AAH18711.1| 216|Homo sapiens RBM38 protein protein.
Length = 216
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDL 480
+ V GLP+ TT+ ++R YF FGD+
Sbjct: 13 IFVGGLPYHTTDASLRKYFEGFGDI 37
>AF432218-1|AAL99924.1| 216|Homo sapiens CLL-associated antigen
KW-5 protein.
Length = 216
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDL 480
+ V GLP+ TT+ ++R YF FGD+
Sbjct: 13 IFVGGLPYHTTDASLRKYFEGFGDI 37
>U09123-1|AAB60650.1| 341|Homo sapiens hnRNP protein A2 protein.
Length = 341
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
L + GL ++TTEE++R+Y+ +G L V RD
Sbjct: 11 LFIGGLSFETTEESLRNYYEQWGKLTDCVVMRD 43
>M29065-1|AAA36574.1| 341|Homo sapiens protein ( Human hnRNP A2
protein mRNA. ).
Length = 341
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
L + GL ++TTEE++R+Y+ +G L V RD
Sbjct: 11 LFIGGLSFETTEESLRNYYEQWGKLTDCVVMRD 43
>M29064-1|AAA60271.1| 353|Homo sapiens SNRPB1 protein.
Length = 353
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
L + GL ++TTEE++R+Y+ +G L V RD
Sbjct: 23 LFIGGLSFETTEESLRNYYEQWGKLTDCVVMRD 55
>EF432052-1|ABO28524.1| 643|Homo sapiens candidate growth-related
and time keeping constitutive hydroquinone (NADH) oxid
protein.
Length = 643
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Frame = +1
Query: 361 FPRAES-PPPR-----PRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQ 492
FP+ + PPP P C + V GLP TEE +++ F GD+ ++
Sbjct: 123 FPQNPNLPPPSTRERPPGCKTVFVGGLPENATEEIIQEVFEQCGDITAIR 172
>D28877-2|BAA06032.1| 341|Homo sapiens hnRNP A2 protein protein.
Length = 341
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
L + GL ++TTEE++R+Y+ +G L V RD
Sbjct: 11 LFIGGLSFETTEESLRNYYEQWGKLTDCVVMRD 43
>D28877-1|BAA06031.1| 353|Homo sapiens hnRNP B1 protein protein.
Length = 353
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
L + GL ++TTEE++R+Y+ +G L V RD
Sbjct: 23 LFIGGLSFETTEESLRNYYEQWGKLTDCVVMRD 55
>BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +3
Query: 501 RYATGLSKGFGFIKFAEYEAQLRALGRRH--MIDGR 602
R A+G SKGFGF+++ +EA +A+ H IDG+
Sbjct: 232 RDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGK 267
>BC024178-1|AAH24178.1| 643|Homo sapiens ENOX1 protein protein.
Length = 643
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Frame = +1
Query: 361 FPRAES-PPPR-----PRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQ 492
FP+ + PPP P C + V GLP TEE +++ F GD+ ++
Sbjct: 123 FPQNPNLPPPSTRERPPGCKTVFVGGLPENATEEIIQEVFEQCGDITAIR 172
>BC000506-1|AAH00506.3| 249|Homo sapiens HNRPA2B1 protein protein.
Length = 249
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 406 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
L + GL ++TTEE++R+Y+ +G L V RD
Sbjct: 11 LFIGGLSFETTEESLRNYYEQWGKLTDCVVMRD 43
>AY513282-1|AAT08035.1| 643|Homo sapiens proliferation-inducing
protein 38 protein.
Length = 643
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Frame = +1
Query: 361 FPRAES-PPPR-----PRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQ 492
FP+ + PPP P C + V GLP TEE +++ F GD+ ++
Sbjct: 123 FPQNPNLPPPSTRERPPGCKTVFVGGLPENATEEIIQEVFEQCGDITAIR 172
>AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 218
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +3
Query: 501 RYATGLSKGFGFIKFAEYEAQLRALGRRH--MIDGR 602
R A+G SKGFGF+++ +EA +A+ H IDG+
Sbjct: 68 RDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGK 103
>AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +3
Query: 501 RYATGLSKGFGFIKFAEYEAQLRALGRRH--MIDGR 602
R A+G SKGFGF+++ +EA +A+ H IDG+
Sbjct: 232 RDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGK 267
>AL627430-1|CAH72199.2| 643|Homo sapiens novel protein protein.
Length = 643
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Frame = +1
Query: 361 FPRAES-PPPR-----PRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQ 492
FP+ + PPP P C + V GLP TEE +++ F GD+ ++
Sbjct: 123 FPQNPNLPPPSTRERPPGCKTVFVGGLPENATEEIIQEVFEQCGDITAIR 172
>AL607148-1|CAH70584.2| 643|Homo sapiens novel protein protein.
Length = 643
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Frame = +1
Query: 361 FPRAES-PPPR-----PRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQ 492
FP+ + PPP P C + V GLP TEE +++ F GD+ ++
Sbjct: 123 FPQNPNLPPPSTRERPPGCKTVFVGGLPENATEEIIQEVFEQCGDITAIR 172
>AL138823-2|CAI16283.2| 643|Homo sapiens novel protein protein.
Length = 643
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Frame = +1
Query: 361 FPRAES-PPPR-----PRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQ 492
FP+ + PPP P C + V GLP TEE +++ F GD+ ++
Sbjct: 123 FPQNPNLPPPSTRERPPGCKTVFVGGLPENATEEIIQEVFEQCGDITAIR 172
>AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +3
Query: 501 RYATGLSKGFGFIKFAEYEAQLRALGRRH--MIDGR 602
R A+G SKGFGF+++ +EA +A+ H IDG+
Sbjct: 217 RDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGK 252
>AK000956-1|BAA91442.1| 643|Homo sapiens protein ( Homo sapiens
cDNA FLJ10094 fis, clone HEMBA1002419. ).
Length = 643
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Frame = +1
Query: 361 FPRAES-PPPR-----PRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQ 492
FP+ + PPP P C + V GLP TEE +++ F GD+ ++
Sbjct: 123 FPQNPNLPPPSTRERPPGCKTVFVGGLPENATEEIIQEVFEQCGDITAIR 172
>AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein
cytoplasmic 5 protein.
Length = 382
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +3
Query: 501 RYATGLSKGFGFIKFAEYEAQLRALGRRH--MIDGR 602
R A+G SKGFGF+++ +EA +A+ H IDG+
Sbjct: 232 RDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGK 267
>BC039879-1|AAH39879.1| 177|Homo sapiens TRSPAP1 protein protein.
Length = 177
Score = 31.5 bits (68), Expect = 3.3
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRAL 575
TG+SKG+GF+KF + Q RAL
Sbjct: 23 TGVSKGYGFVKFTDELEQKRAL 44
>BC000680-1|AAH00680.1| 287|Homo sapiens tRNA selenocysteine
associated protein 1 protein.
Length = 287
Score = 31.5 bits (68), Expect = 3.3
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRAL 575
TG+SKG+GF+KF + Q RAL
Sbjct: 133 TGVSKGYGFVKFTDELEQKRAL 154
>AL513497-3|CAI22288.1| 287|Homo sapiens tRNA selenocysteine
associated protein (SECP43) protein.
Length = 287
Score = 31.5 bits (68), Expect = 3.3
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRAL 575
TG+SKG+GF+KF + Q RAL
Sbjct: 133 TGVSKGYGFVKFTDELEQKRAL 154
>AK000510-1|BAA91217.1| 287|Homo sapiens protein ( Homo sapiens
cDNA FLJ20503 fis, clone KAT09346. ).
Length = 287
Score = 31.5 bits (68), Expect = 3.3
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRAL 575
TG+SKG+GF+KF + Q RAL
Sbjct: 133 TGVSKGYGFVKFTDELEQKRAL 154
>X03910-1|CAA27544.1| 225|Homo sapiens protein ( Human mRNA for
hnRNP C protein cross-reacting with C1 and C2 hnRNP
core proteins. ).
Length = 225
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 367 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRD 504
RA++ + + V GL T EE +R+YF FG++ +++ D
Sbjct: 161 RAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 206
>AF087905-1|AAP97203.1| 425|Homo sapiens splicing factor SF2
protein.
Length = 425
Score = 30.3 bits (65), Expect = 7.7
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 510 TGLSKGFGFIKFAEYEAQLRALG 578
TG SKG+GFI F++ E RA G
Sbjct: 284 TGRSKGYGFITFSDSECARRACG 306
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,534,727
Number of Sequences: 237096
Number of extensions: 2124942
Number of successful extensions: 6989
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 6167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6980
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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