Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30288
(704 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P23396 Cluster: 40S ribosomal protein S3; n=174; Eukary... 179 5e-44
UniRef50_A7NTL0 Cluster: Chromosome chr18 scaffold_1, whole geno... 113 4e-24
UniRef50_Q59N00 Cluster: Likely cytosolic ribosomal protein S3; ... 113 4e-24
UniRef50_Q38EW1 Cluster: 40S ribosomal protein S3, putative; n=4... 110 4e-23
UniRef50_A2DIM3 Cluster: Ribosomal protein S3, putative; n=1; Tr... 101 2e-20
UniRef50_Q8SQM3 Cluster: 40S ribosomal protein S3; n=1; Encephal... 99 9e-20
UniRef50_UPI00005A35DE Cluster: PREDICTED: similar to 40S riboso... 94 3e-18
UniRef50_Q22AV9 Cluster: KH domain containing protein; n=3; Olig... 94 3e-18
UniRef50_Q01BA3 Cluster: Putative ribosomal protein; n=1; Ostreo... 93 6e-18
UniRef50_A7NXL1 Cluster: Chromosome chr5 scaffold_2, whole genom... 82 1e-14
UniRef50_Q7QNT9 Cluster: GLP_157_11435_12088; n=1; Giardia lambl... 80 5e-14
UniRef50_A7NXL5 Cluster: Chromosome chr5 scaffold_2, whole genom... 69 9e-11
UniRef50_Q8TRU1 Cluster: 30S ribosomal protein S3P; n=8; Euryarc... 69 9e-11
UniRef50_Q8U004 Cluster: 30S ribosomal protein S3P; n=5; Euryarc... 67 3e-10
UniRef50_A5ATU8 Cluster: Putative uncharacterized protein; n=1; ... 66 6e-10
UniRef50_A7QEK7 Cluster: Chromosome chr17 scaffold_85, whole gen... 66 8e-10
UniRef50_A3CT03 Cluster: 30S ribosomal protein S3P; n=4; Archaea... 66 8e-10
UniRef50_A6R2L3 Cluster: Predicted protein; n=1; Ajellomyces cap... 65 2e-09
UniRef50_P20281 Cluster: 30S ribosomal protein S3P; n=5; Halobac... 64 3e-09
UniRef50_Q8LNX7 Cluster: Putative ribosomal protein S3; n=1; Zin... 64 4e-09
UniRef50_O28360 Cluster: 30S ribosomal protein S3P; n=1; Archaeo... 64 4e-09
UniRef50_Q6LXE7 Cluster: 30S ribosomal protein S3P; n=5; Methano... 62 2e-08
UniRef50_Q8TX35 Cluster: 30S ribosomal protein S3P; n=1; Methano... 60 5e-08
UniRef50_O26116 Cluster: 30S ribosomal protein S3P; n=3; Methano... 58 2e-07
UniRef50_UPI00015BB204 Cluster: SSU ribosomal protein S3P; n=1; ... 57 4e-07
UniRef50_Q9UXA0 Cluster: 30S ribosomal protein S3P; n=2; Thermop... 57 5e-07
UniRef50_A1RXG6 Cluster: 30S ribosomal protein S3P; n=2; Thermof... 56 8e-07
UniRef50_Q4JB46 Cluster: 30S ribosomal protein S3P; n=3; Sulfolo... 54 5e-06
UniRef50_A5B260 Cluster: Putative uncharacterized protein; n=1; ... 53 6e-06
UniRef50_A0RVX9 Cluster: 30S ribosomal protein S3P; n=2; Thermop... 51 2e-05
UniRef50_Q3LWD3 Cluster: Ribosomal protein S3; n=1; Bigelowiella... 49 1e-04
UniRef50_Q9HIR5 Cluster: 30S ribosomal protein S3P; n=4; Thermop... 48 2e-04
UniRef50_A3DNB3 Cluster: 30S ribosomal protein S3P; n=1; Staphyl... 47 4e-04
UniRef50_Q673S3 Cluster: Ribosomal protein S3; n=2; environmenta... 47 5e-04
UniRef50_Q8ZWI0 Cluster: 30S ribosomal protein S3P; n=6; Pyrobac... 44 0.003
UniRef50_A3H696 Cluster: Ribosomal protein S3-like; n=1; Caldivi... 44 0.004
UniRef50_Q74MZ4 Cluster: 30S ribosomal protein S3P; n=2; Nanoarc... 42 0.020
UniRef50_A5DF25 Cluster: Putative uncharacterized protein; n=1; ... 41 0.026
UniRef50_Q7MTL9 Cluster: 30S ribosomal protein S3; n=19; Bactero... 40 0.079
UniRef50_Q9RXJ6 Cluster: 30S ribosomal protein S3; n=2; Deinococ... 38 0.18
UniRef50_Q52188 Cluster: TraC precursor; n=9; root|Rep: TraC pre... 36 1.3
UniRef50_UPI0000DA2268 Cluster: PREDICTED: hypothetical protein;... 34 3.0
UniRef50_Q04G79 Cluster: 30S ribosomal protein S3; n=1; Oenococc... 34 3.0
UniRef50_Q1AS93 Cluster: Putative uncharacterized protein; n=1; ... 34 3.9
UniRef50_Q6KI49 Cluster: 30S ribosomal protein S3; n=9; Mycoplas... 34 3.9
UniRef50_A6EHQ8 Cluster: 30S ribosomal protein S3; n=1; Pedobact... 33 6.8
UniRef50_Q3EBB8 Cluster: Uncharacterized protein At3g06190.2; n=... 33 6.8
UniRef50_Q39682 Cluster: Glycine-rich protein; n=1; Daucus carot... 33 6.8
UniRef50_Q20F10 Cluster: Chloroplast 30S ribosomal protein S3; n... 33 6.8
UniRef50_UPI0000F1F8B1 Cluster: PREDICTED: hypothetical protein;... 33 9.0
UniRef50_UPI000069EF05 Cluster: CDNA FLJ12906 fis, clone NT2RP20... 33 9.0
UniRef50_A6NXD5 Cluster: Putative uncharacterized protein; n=1; ... 33 9.0
UniRef50_Q5SCB4 Cluster: Cyclin H; n=2; Ostreococcus|Rep: Cyclin... 33 9.0
UniRef50_Q9VWU0 Cluster: CG15046-PA; n=2; Sophophora|Rep: CG1504... 33 9.0
UniRef50_Q5XIY2 Cluster: Transmembrane protein 56; n=8; Euteleos... 33 9.0
>UniRef50_P23396 Cluster: 40S ribosomal protein S3; n=174;
Eukaryota|Rep: 40S ribosomal protein S3 - Homo sapiens
(Human)
Length = 243
Score = 179 bits (436), Expect = 5e-44
Identities = 93/140 (66%), Positives = 102/140 (72%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 436
SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKL
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 437 RGQRAKSMKFVDGLMIHSGDPCNDTSTLLPDMCFSDKEY*ESRSKSCCRGTSKARTARRK 616
RGQRAKSMKFVDGLMIHSGDP N + + K + +K
Sbjct: 143 RGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKK 202
Query: 617 PQPDHILVTEPKDEPVAPRT 676
P PDH+ + EPKDE + P T
Sbjct: 203 PLPDHVSIVEPKDE-ILPTT 221
Score = 142 bits (345), Expect = 6e-33
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 189 GEKGRRIRELTSVVQKRFNIPE 254
GEKGRRIRELT+VVQKRF PE
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPE 81
Score = 70.1 bits (164), Expect = 5e-11
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = +1
Query: 496 PLQ*YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKK 615
P+ YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKK
Sbjct: 163 PVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKK 202
>UniRef50_A7NTL0 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 617
Score = 113 bits (272), Expect = 4e-24
Identities = 57/81 (70%), Positives = 66/81 (81%)
Frame = +3
Query: 15 VNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGE 194
V +SKKRKF DGVF A LNE LTREL E+GYSG EVRVTP+ +EIII AT+T +VLGE
Sbjct: 2 VTQMSKKRKFAVDGVFFAGLNEVLTRELVENGYSGDEVRVTPMCTEIIIRATQTHNVLGE 61
Query: 195 KGRRIRELTSVVQKRFNIPEN 257
KG++I+ELTSVVQKRF EN
Sbjct: 62 KGKKIKELTSVVQKRFEFLEN 82
Score = 57.6 bits (133), Expect = 3e-07
Identities = 42/84 (50%), Positives = 45/84 (53%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 436
SVEL AEKV RG AIAQAESLRYKL+GGLA+ L
Sbjct: 83 SVELCAEKVNNRGFYAIAQAESLRYKLLGGLAM--------------------------L 116
Query: 437 RGQRAKSMKFVDGLMIHSGDPCND 508
QRAKSMKF DG +I SG P D
Sbjct: 117 CAQRAKSMKFKDGYLISSGQPVKD 140
Score = 49.6 bits (113), Expect = 7e-05
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +1
Query: 493 RPLQ*YVNTATRHVLLRQGVLGIKVKIMLPWDQQGK 600
+P++ Y++ A RHVL RQGVLGIKVKIM WD +GK
Sbjct: 136 QPVKDYIDLAVRHVL-RQGVLGIKVKIMFNWDPKGK 170
>UniRef50_Q59N00 Cluster: Likely cytosolic ribosomal protein S3;
n=4; Saccharomycetales|Rep: Likely cytosolic ribosomal
protein S3 - Candida albicans (Yeast)
Length = 251
Score = 113 bits (272), Expect = 4e-24
Identities = 53/87 (60%), Positives = 64/87 (73%)
Frame = +2
Query: 248 SRESVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 427
S E + +YAE+V RGL A QAE+L+ KL+ GL +RRA YGVLRF M +GA+G EVV+S
Sbjct: 81 SPEGIAIYAERVEERGLSAAVQAEALKAKLLSGLPIRRAAYGVLRFAMGAGAKGVEVVIS 140
Query: 428 GKLRGQRAKSMKFVDGLMIHSGDPCND 508
GKLR RAKS K+ DG MIHSG P D
Sbjct: 141 GKLRAARAKSQKYADGFMIHSGQPTRD 167
Score = 109 bits (261), Expect = 9e-23
Identities = 52/80 (65%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
Frame = +3
Query: 24 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 203
+SKK+K V DGVF AELNEF TRELAE GY+GVEVR TP + E+I+ A+ TQ VLGE+GR
Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGR 65
Query: 204 RIRELTSVVQKRFNI-PENL 260
RI ELTS++ KRF + PE +
Sbjct: 66 RIHELTSLIVKRFKLSPEGI 85
Score = 41.5 bits (93), Expect = 0.020
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +1
Query: 493 RPLQ*YVNTATRHVLLRQGVLGIKVKIM 576
+P + +++ A RHVL+RQGVLGIKVKIM
Sbjct: 163 QPTRDFIDIAIRHVLMRQGVLGIKVKIM 190
>UniRef50_Q38EW1 Cluster: 40S ribosomal protein S3, putative; n=4;
Trypanosoma|Rep: 40S ribosomal protein S3, putative -
Trypanosoma brucei
Length = 266
Score = 110 bits (264), Expect = 4e-23
Identities = 49/87 (56%), Positives = 66/87 (75%)
Frame = +2
Query: 233 EAIQHSRESVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGC 412
+ + ++L+AE+V RGL A+AQAESLR+KL+ L VRRA G++R++MESGA+GC
Sbjct: 126 QRFNYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRYVMESGAKGC 185
Query: 413 EVVVSGKLRGQRAKSMKFVDGLMIHSG 493
EV + GK++GQRAKSM F DG MI SG
Sbjct: 186 EVTIGGKIKGQRAKSMTFRDGYMIKSG 212
Score = 108 bits (259), Expect = 2e-22
Identities = 52/77 (67%), Positives = 64/77 (83%)
Frame = +3
Query: 24 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 203
+SKKR V DGVF AEL EFL RELA+DG++GVE RVTP R+EI+I +T+T+ VLGEKGR
Sbjct: 56 LSKKRMMVRDGVFYAELFEFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGR 115
Query: 204 RIRELTSVVQKRFNIPE 254
RIRELT+ +Q+RFN E
Sbjct: 116 RIRELTACLQQRFNYKE 132
Score = 35.9 bits (79), Expect = 0.97
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 508 YVNTATRHVLLRQGVLGIKVKIMLP 582
+V+TATRH LR G +G+ VKIM P
Sbjct: 218 FVDTATRHCHLRAGTIGVNVKIMRP 242
>UniRef50_A2DIM3 Cluster: Ribosomal protein S3, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3,
putative - Trichomonas vaginalis G3
Length = 216
Score = 101 bits (241), Expect = 2e-20
Identities = 42/81 (51%), Positives = 62/81 (76%)
Frame = +2
Query: 254 ESVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGK 433
+S+E++ +++ +GL A+ Q ESLRYKLI + RRA Y ++RF+M++GARGCEV +SGK
Sbjct: 83 DSLEIFIDRIQRKGLSALNQLESLRYKLIARIPARRAAYSIIRFVMDAGARGCEVAISGK 142
Query: 434 LRGQRAKSMKFVDGLMIHSGD 496
LRG RA + K+ +G M+ SGD
Sbjct: 143 LRGARASTSKYKEGYMVKSGD 163
Score = 83.0 bits (196), Expect = 6e-15
Identities = 38/83 (45%), Positives = 55/83 (66%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
M +K R+ + G+F AELNE LTREL ++GY G EVR TP R+EIII A T+ +
Sbjct: 1 MKAQRCTKVRRIIETGLFYAELNELLTRELTKEGYGGCEVRQTPTRTEIIIKAANTKEFV 60
Query: 189 GEKGRRIRELTSVVQKRFNIPEN 257
GRR++E+ ++QKR+ + E+
Sbjct: 61 DNHGRRLQEVRMMIQKRWRLKED 83
Score = 36.3 bits (80), Expect = 0.73
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 508 YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKA 618
+V A H+ ++Q +GI+V IML D G +GPK++
Sbjct: 168 FVTQAVGHIPMKQATIGIRVLIMLAQDPSGISGPKES 204
>UniRef50_Q8SQM3 Cluster: 40S ribosomal protein S3; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S3 -
Encephalitozoon cuniculi
Length = 228
Score = 99.1 bits (236), Expect = 9e-20
Identities = 45/85 (52%), Positives = 62/85 (72%)
Frame = +2
Query: 254 ESVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGK 433
ESVE+ EKV +GLCA+ QA +R K++GG+ RRA L+ + A+GC+++VSGK
Sbjct: 93 ESVEIVVEKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKTARHAKAQGCQIIVSGK 152
Query: 434 LRGQRAKSMKFVDGLMIHSGDPCND 508
L+GQRAKS+KF DG++IHSGD D
Sbjct: 153 LKGQRAKSVKFQDGVLIHSGDAVKD 177
Score = 50.8 bits (116), Expect = 3e-05
Identities = 21/72 (29%), Positives = 41/72 (56%)
Frame = +3
Query: 39 KFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIREL 218
+F+ +G+ AEL EF + L +G+S +E+R+ +II+ + +GEK R+R+
Sbjct: 21 RFMKNGLMNAELKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKFRLRQF 80
Query: 219 TSVVQKRFNIPE 254
+ +R +P+
Sbjct: 81 QHLAAQRLEVPD 92
Score = 42.3 bits (95), Expect = 0.011
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +1
Query: 508 YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGP 609
Y+NT V +QGV+GI+V+IMLP+D +G GP
Sbjct: 178 YINTGYATVETKQGVIGIQVRIMLPYDPEGVLGP 211
>UniRef50_UPI00005A35DE Cluster: PREDICTED: similar to 40S ribosomal
protein S3; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S3 - Canis familiaris
Length = 161
Score = 94.3 bits (224), Expect = 3e-18
Identities = 45/57 (78%), Positives = 51/57 (89%)
Frame = +3
Query: 27 SKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEK 197
SKKR+FV DG+F+AELNEFLTRELAEDG S VEVRVTP + EIII+ TRTQ+VLGEK
Sbjct: 6 SKKRQFVADGIFRAELNEFLTRELAEDGDSRVEVRVTPTKPEIIILTTRTQNVLGEK 62
Score = 58.4 bits (135), Expect = 2e-07
Identities = 34/76 (44%), Positives = 41/76 (53%)
Frame = +2
Query: 386 IMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDTSTLLPDMCFSDKEY*ESR 565
+ ESGA+G E +VSGKL+GQRAKS KFVD MIHS D N + S+
Sbjct: 80 VQESGAKGYEAMVSGKLQGQRAKSAKFVDDSMIHSRDCVNHYVDTSVHHVLLRQGVLGSK 139
Query: 566 SKSCCRGTSKARTARR 613
+SC GT A R
Sbjct: 140 CRSCFPGTQAVTLALR 155
>UniRef50_Q22AV9 Cluster: KH domain containing protein; n=3;
Oligohymenophorea|Rep: KH domain containing protein -
Tetrahymena thermophila SB210
Length = 253
Score = 93.9 bits (223), Expect = 3e-18
Identities = 39/88 (44%), Positives = 64/88 (72%)
Frame = +2
Query: 245 HSRESVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVV 424
+S + ++++AE + +GLCA AQ E++ YKL+ + VR A +++ +++ GA+GCE+++
Sbjct: 92 YSDDQIQIWAEPIKFKGLCASAQVEAMNYKLLKDVPVRLAANYIIKSVIQDGAKGCEIII 151
Query: 425 SGKLRGQRAKSMKFVDGLMIHSGDPCND 508
SGKL+ QRAK+MKF G MI +G P ND
Sbjct: 152 SGKLKQQRAKTMKFKQGYMICTGQPKND 179
Score = 87.8 bits (208), Expect = 2e-16
Identities = 39/78 (50%), Positives = 58/78 (74%)
Frame = +3
Query: 24 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 203
I+KK+KFV DGVF AEL+ F ++ L + GY+G+EVR TP ++EI I AT+ Q V+G +G+
Sbjct: 18 INKKKKFVADGVFNAELHSFFSKSLQDAGYAGIEVRRTPTKTEIRIKATKPQQVIGVEGK 77
Query: 204 RIRELTSVVQKRFNIPEN 257
+ +ELT +QKRF ++
Sbjct: 78 KHKELTQFLQKRFGYSDD 95
Score = 44.0 bits (99), Expect = 0.004
Identities = 16/32 (50%), Positives = 25/32 (78%)
Frame = +1
Query: 493 RPLQ*YVNTATRHVLLRQGVLGIKVKIMLPWD 588
+P Y++ A RHV +QG++G+KVKIMLP++
Sbjct: 175 QPKNDYIDVAVRHVFFKQGIMGVKVKIMLPYE 206
>UniRef50_Q01BA3 Cluster: Putative ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative ribosomal protein -
Ostreococcus tauri
Length = 145
Score = 93.1 bits (221), Expect = 6e-18
Identities = 50/102 (49%), Positives = 60/102 (58%)
Frame = +2
Query: 353 VRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDTSTLLPDM 532
VR ACYGVLR+IMESGA+G EVVVSGKLRGQRAK+MKF DG MI SG+P D
Sbjct: 30 VRSACYGVLRYIMESGAKGAEVVVSGKLRGQRAKAMKFKDGYMISSGNPVRDYIVSCTRH 89
Query: 533 CFSDKEY*ESRSKSCCRGTSKARTARRKPQPDHILVTEPKDE 658
+ R K K R P PD +++ PK++
Sbjct: 90 ALLRQGTIGMRVKIMLDHDPKGRDGPSTPIPDTVVIHTPKED 131
>UniRef50_A7NXL1 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 243
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/55 (70%), Positives = 45/55 (81%)
Frame = +2
Query: 257 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVV 421
+VELYAEK R AIAQAESLR+KL+GGL VRRA YGVL F+MESG +GCEV+
Sbjct: 137 NVELYAEKFNNRVFYAIAQAESLRFKLLGGLVVRRAGYGVLSFVMESGTKGCEVI 191
Score = 57.6 bits (133), Expect = 3e-07
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = +3
Query: 150 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEN 257
EIII AT+TQ+VLG+KGR+IRELTSVVQKRF EN
Sbjct: 101 EIIIHATQTQNVLGKKGRKIRELTSVVQKRFEFLEN 136
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = +1
Query: 460 EVCRWTHDPLWRPLQ*YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGP 609
EV W +P++ Y+N+ RHVLL+QGVL IKVKI++ QG+ GP
Sbjct: 189 EVIGWYIISSGQPVKDYINSVVRHVLLKQGVLSIKVKIIVRLGSQGQAGP 238
>UniRef50_Q7QNT9 Cluster: GLP_157_11435_12088; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_157_11435_12088 - Giardia lamblia
ATCC 50803
Length = 217
Score = 80.2 bits (189), Expect = 5e-14
Identities = 35/82 (42%), Positives = 55/82 (67%)
Frame = +2
Query: 254 ESVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGK 433
++ ++ +K+ RGL A ++LR KL + +RRA Y ++R M +GA GCEV+V+GK
Sbjct: 88 KNFNIWVDKIIKRGLSAEIMVDNLRAKLEEAMPIRRAAYSIIRTAMRAGAAGCEVIVAGK 147
Query: 434 LRGQRAKSMKFVDGLMIHSGDP 499
LR QRA++ KF +G +I +G P
Sbjct: 148 LRAQRARANKFKEGCLISTGHP 169
Score = 41.5 bits (93), Expect = 0.020
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +3
Query: 39 KFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIREL 218
K++ D + +AEL+EF +REL + GY+ + T +II + V+G+ R+ ++
Sbjct: 16 KYLNDCIMEAELHEFFSRELVDAGYASCSLCRTIDSICVIIQCAEPEVVMGDNHYRLHKI 75
Query: 219 TSVVQKRF 242
++ RF
Sbjct: 76 EYLLAGRF 83
Score = 35.1 bits (77), Expect = 1.7
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = +1
Query: 496 PLQ*YVNTATRHVLLRQGVLGIKVKIMLP 582
P + ++ ATRH+ +RQGV+G+KV+I P
Sbjct: 169 PKRIFLAEATRHIKMRQGVIGVKVRIYNP 197
>UniRef50_A7NXL5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 149
Score = 69.3 bits (162), Expect = 9e-11
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = +3
Query: 93 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSV 227
+++EDGYSGV+VRVTP+R EIII ATRTQ+ LGEK RRIREL V
Sbjct: 16 DISEDGYSGVQVRVTPMRMEIIIHATRTQNALGEKRRRIRELILV 60
>UniRef50_Q8TRU1 Cluster: 30S ribosomal protein S3P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S3P -
Methanosarcina acetivorans
Length = 318
Score = 69.3 bits (162), Expect = 9e-11
Identities = 37/91 (40%), Positives = 55/91 (60%)
Frame = +2
Query: 236 AIQHSRESVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCE 415
A ++S E+ ++ A++V L A A L + G R+A + LR +M +GA GCE
Sbjct: 70 ANKYSLENPQIDAQEVKRPELNAQMMASRLAASIERGWYFRKAGHNTLRAVMNAGALGCE 129
Query: 416 VVVSGKLRGQRAKSMKFVDGLMIHSGDPCND 508
VV+SGKL G R++ KFVDG + HSG+P +
Sbjct: 130 VVISGKLTGARSRVEKFVDGYIKHSGNPVEE 160
Score = 60.9 bits (141), Expect = 3e-08
Identities = 25/72 (34%), Positives = 48/72 (66%)
Frame = +3
Query: 33 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 212
++KFV DG KA ++E+ +L+ GY G+E+ TP+ ++I+I + + V+G+ G+ IR
Sbjct: 4 EKKFVNDGYVKASMDEYFAEQLSRAGYGGMELNRTPMGTQIVIYSEKPGMVIGKAGKVIR 63
Query: 213 ELTSVVQKRFNI 248
+LT V ++++
Sbjct: 64 KLTRDVANKYSL 75
>UniRef50_Q8U004 Cluster: 30S ribosomal protein S3P; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S3P -
Pyrococcus furiosus
Length = 210
Score = 67.3 bits (157), Expect = 3e-10
Identities = 36/86 (41%), Positives = 50/86 (58%)
Frame = +2
Query: 242 QHSRESVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVV 421
Q E+ ++ E++ L A QA L L G+ RRA Y LR IM +GARG E+
Sbjct: 72 QFGLENPQIEVEEIKNPYLNAKVQAVRLAQALERGIHFRRAAYAALRAIMNNGARGVEIR 131
Query: 422 VSGKLRGQRAKSMKFVDGLMIHSGDP 499
+SGKL G+RAKS++F G + G+P
Sbjct: 132 LSGKLTGERAKSIRFYQGYLAKVGNP 157
Score = 65.7 bits (153), Expect = 1e-09
Identities = 28/72 (38%), Positives = 49/72 (68%)
Frame = +3
Query: 33 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 212
+R F+ + V + ++EFL +EL GY G++++ TP+ +++II A V+G GRRIR
Sbjct: 4 ERYFIREAVREMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 213 ELTSVVQKRFNI 248
ELT +++K+F +
Sbjct: 64 ELTRILEKQFGL 75
>UniRef50_A5ATU8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 286
Score = 66.5 bits (155), Expect = 6e-10
Identities = 31/46 (67%), Positives = 38/46 (82%)
Frame = +3
Query: 93 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVV 230
++ EDGYS V+VRVTP+ EII+ ATRTQ+ L EKGRRIRELT V+
Sbjct: 139 DILEDGYSNVKVRVTPMGMEIIVRATRTQNALSEKGRRIRELTLVM 184
>UniRef50_A7QEK7 Cluster: Chromosome chr17 scaffold_85, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_85, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 514
Score = 66.1 bits (154), Expect = 8e-10
Identities = 32/45 (71%), Positives = 37/45 (82%)
Frame = +3
Query: 93 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSV 227
++ EDGYS V+VRVTP+ EIII ATRTQ+ L EKGRRIRELT V
Sbjct: 406 DILEDGYSDVKVRVTPMGMEIIIRATRTQNALSEKGRRIRELTLV 450
Score = 42.7 bits (96), Expect = 0.008
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +3
Query: 93 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
++ EDGYS ++V+VT +R EIII ATRTQ+ L
Sbjct: 281 DIPEDGYSDIKVKVTGMRMEIIIHATRTQNAL 312
>UniRef50_A3CT03 Cluster: 30S ribosomal protein S3P; n=4;
Archaea|Rep: 30S ribosomal protein S3P - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 234
Score = 66.1 bits (154), Expect = 8e-10
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +2
Query: 236 AIQHSRESVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCE 415
A + ES ++ ++V A AE L L G R+A +R IMESGA GCE
Sbjct: 70 ATDYDIESPQVEVQQVQNPNFNAQIMAERLANALERGWYFRKAGSSTIRRIMESGALGCE 129
Query: 416 VVVSGKLRGQRAKSMKFVDGLMIHSGDP 499
V+V+GKL G R+++ KF +G + H G+P
Sbjct: 130 VIVAGKLTGSRSRTQKFTEGYIKHCGEP 157
Score = 58.8 bits (136), Expect = 1e-07
Identities = 24/72 (33%), Positives = 47/72 (65%)
Frame = +3
Query: 33 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 212
++KF+ DGV + +FLT+EL GY G+++ TP+ +++ I A + V+G+ G+++R
Sbjct: 4 EKKFITDGVRNVRVEKFLTKELKRAGYGGMDIARTPLGTQVTIFAEKPGIVIGKGGKQVR 63
Query: 213 ELTSVVQKRFNI 248
+LT + ++I
Sbjct: 64 QLTQDLATDYDI 75
>UniRef50_A6R2L3 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 151
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = +3
Query: 21 NISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEII 158
+ISK+RKFV GVF A LN F RELAE+GYSGVEVRVTP ++II
Sbjct: 84 DISKRRKFVVGGVFYAGLNGFFLRELAEEGYSGVEVRVTPTGTDII 129
>UniRef50_P20281 Cluster: 30S ribosomal protein S3P; n=5;
Halobacteriaceae|Rep: 30S ribosomal protein S3P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 304
Score = 64.1 bits (149), Expect = 3e-09
Identities = 24/77 (31%), Positives = 53/77 (68%)
Frame = +3
Query: 24 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 203
++ +++F+ DG+ + +++EF EL GY G++V TP+ ++I++ A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 204 RIRELTSVVQKRFNIPE 254
IR++T+ ++ RFN+ +
Sbjct: 61 NIRKITTELEDRFNLDD 77
Score = 50.0 bits (114), Expect = 6e-05
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +2
Query: 314 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 493
A+ L L G R+A + + IMESGA G E+V+SGK+ G R++ KF G + H+G
Sbjct: 96 ADRLANALERGWYFRKAGHTTIDRIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNG 155
Query: 494 DPCND 508
+P +
Sbjct: 156 EPAEE 160
>UniRef50_Q8LNX7 Cluster: Putative ribosomal protein S3; n=1; Zinnia
elegans|Rep: Putative ribosomal protein S3 - Zinnia
elegans (Zinnia)
Length = 143
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1
Query: 493 RPLQ*YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPK 612
+P++ Y+++A RHVLLRQGVLGIKVKIML WD GK GPK
Sbjct: 19 QPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPTGKLGPK 58
Score = 33.5 bits (73), Expect = 5.2
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +2
Query: 443 QRAKSMKFVDGLMIHSGDPCND 508
QRAKSMKF DG M+ SG P +
Sbjct: 2 QRAKSMKFKDGYMVSSGQPVKE 23
>UniRef50_O28360 Cluster: 30S ribosomal protein S3P; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3P -
Archaeoglobus fulgidus
Length = 229
Score = 63.7 bits (148), Expect = 4e-09
Identities = 34/82 (41%), Positives = 49/82 (59%)
Frame = +2
Query: 254 ESVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGK 433
E+ ++ ++V A A L L G RRA Y L IME+GA+GCE+ +SGK
Sbjct: 75 ENPQVSVDEVEKPEFNAQLMASLLARALERGWYFRRAGYRFLYRIMEAGAKGCEIEISGK 134
Query: 434 LRGQRAKSMKFVDGLMIHSGDP 499
L +RA++ KFV G ++H+GDP
Sbjct: 135 LVSERARTEKFVAGTIVHTGDP 156
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/72 (33%), Positives = 43/72 (59%)
Frame = +3
Query: 33 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 212
+RKFV + + K + E++ E+ G+ GV++ TP+ +++ + R V+G+ GRRI+
Sbjct: 4 ERKFVQERLKKLMVKEWIKDEVRSAGFGGVDILRTPLGTQVTLFVERPGLVIGKGGRRIK 63
Query: 213 ELTSVVQKRFNI 248
LT + K F I
Sbjct: 64 ALTEKL-KDFGI 74
>UniRef50_Q6LXE7 Cluster: 30S ribosomal protein S3P; n=5;
Methanococcus|Rep: 30S ribosomal protein S3P -
Methanococcus maripaludis
Length = 211
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/90 (32%), Positives = 52/90 (57%)
Frame = +2
Query: 230 TEAIQHSRESVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARG 409
T A ++S ++ ++ ++V L + L G+ R+ + +R +M SGA+G
Sbjct: 67 TLATEYSVKNPQIEVKQVENPDLDPAVVGHKIASSLERGMHFRKTAHSAIRRVMGSGAKG 126
Query: 410 CEVVVSGKLRGQRAKSMKFVDGLMIHSGDP 499
++VSGKL G+R+++ KF+DG M H G+P
Sbjct: 127 VAIIVSGKLSGERSRTEKFMDGYMKHCGEP 156
Score = 54.0 bits (124), Expect = 3e-06
Identities = 22/72 (30%), Positives = 43/72 (59%)
Frame = +3
Query: 33 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 212
+R FVG+ V + ++E+ +L GYS ++ + TPI + I + A + V+G KG+ ++
Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDFKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 213 ELTSVVQKRFNI 248
ELT + +++
Sbjct: 63 ELTETLATEYSV 74
>UniRef50_Q8TX35 Cluster: 30S ribosomal protein S3P; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3P -
Methanopyrus kandleri
Length = 227
Score = 60.1 bits (139), Expect = 5e-08
Identities = 29/79 (36%), Positives = 44/79 (55%)
Frame = +3
Query: 6 IMAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSV 185
+M N+ +KFV G+ K EL+E+L EL GY G+ ++ P ++II R
Sbjct: 2 VMYGENVPVHKKFVQYGMLKTELDEYLEEELGRAGYGGMRLQRVPNATKIIAYVERPAIA 61
Query: 186 LGEKGRRIRELTSVVQKRF 242
+G +GR IR + VQ+RF
Sbjct: 62 IGRRGRNIRRVEEEVQERF 80
Score = 59.3 bits (137), Expect = 9e-08
Identities = 28/62 (45%), Positives = 41/62 (66%)
Frame = +2
Query: 314 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 493
A L L G+ RRA YG LR IM +GA+G +++SGKL G RA++ KF++G + + G
Sbjct: 104 ARRLASALERGIHFRRAAYGALRRIMNAGAKGAMIILSGKLIGARARTEKFMEGAVKYCG 163
Query: 494 DP 499
+P
Sbjct: 164 EP 165
>UniRef50_O26116 Cluster: 30S ribosomal protein S3P; n=3;
Methanobacteriaceae|Rep: 30S ribosomal protein S3P -
Methanobacterium thermoautotrophicum
Length = 258
Score = 58.0 bits (134), Expect = 2e-07
Identities = 22/72 (30%), Positives = 48/72 (66%)
Frame = +3
Query: 33 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 212
++ FV +G+ + ++E+L +EL GY G++V+VTP+ + +++ A R V+G G+ +R
Sbjct: 3 EKDFVVEGLRRTRIDEYLEKELERAGYGGMDVQVTPMGTMVVVYAERPGMVIGRGGKTVR 62
Query: 213 ELTSVVQKRFNI 248
+T ++ +F++
Sbjct: 63 AITQKLKNKFDL 74
Score = 55.6 bits (128), Expect = 1e-06
Identities = 29/82 (35%), Positives = 45/82 (54%)
Frame = +2
Query: 254 ESVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGK 433
E+ ++ ++V L A + L G+ RR Y +R IM +GA+G EV +SGK
Sbjct: 75 ENPQVEVKEVDVPELNPKIMAHKIAAMLQRGMHFRRVAYTTMRRIMAAGAQGVEVTISGK 134
Query: 434 LRGQRAKSMKFVDGLMIHSGDP 499
+RG R+ + KF DG + G+P
Sbjct: 135 IRGARSATAKFTDGYIKKCGEP 156
>UniRef50_UPI00015BB204 Cluster: SSU ribosomal protein S3P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S3P - Ignicoccus hospitalis KIN4/I
Length = 241
Score = 57.2 bits (132), Expect = 4e-07
Identities = 25/81 (30%), Positives = 53/81 (65%)
Frame = +3
Query: 9 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 188
M+V + K+ F+ + + +++E+L + GYS VE++ TP+ + +II A R+ +++
Sbjct: 1 MSVAKKNIKKYFLEQALTQVKVDEYLAYKFHSVGYSKVELQKTPMGTRVIIYAERSGAII 60
Query: 189 GEKGRRIRELTSVVQKRFNIP 251
G +G+ I+++T V+++ F IP
Sbjct: 61 GRRGQTIKQITKVLEEWFGIP 81
Score = 53.6 bits (123), Expect = 5e-06
Identities = 33/73 (45%), Positives = 41/73 (56%)
Frame = +2
Query: 278 KVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKS 457
KV L A A L L G RRA Y LR IM +GA G +V VSGKLRG+RA+
Sbjct: 89 KVEEPELDARVMAFRLANALQRGFHFRRAAYTTLRRIMGAGAIGAQVKVSGKLRGERARF 148
Query: 458 MKFVDGLMIHSGD 496
K++ G + SG+
Sbjct: 149 EKYIAGKVYKSGN 161
>UniRef50_Q9UXA0 Cluster: 30S ribosomal protein S3P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S3P - Sulfolobus
solfataricus
Length = 229
Score = 56.8 bits (131), Expect = 5e-07
Identities = 25/72 (34%), Positives = 43/72 (59%)
Frame = +3
Query: 33 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 212
KR F+ + K +++E+L ++ Y+GVEV TPI + +II A R ++G GR I+
Sbjct: 5 KRYFLEKSIVKVKIDEYLAKQYYNAEYAGVEVLKTPIGTRVIIYAGRPSMIIGRGGRNIK 64
Query: 213 ELTSVVQKRFNI 248
+L + +K F +
Sbjct: 65 QLAQIFEKVFGL 76
Score = 47.2 bits (107), Expect = 4e-04
Identities = 28/80 (35%), Positives = 42/80 (52%)
Frame = +2
Query: 254 ESVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGK 433
E+ ++ V L A A L L G RRA + +R IM +GA G E+++SGK
Sbjct: 77 ENPQITITNVENPELNARVMAFRLAIALEKGYHFRRAAFISMRRIMNAGALGAEIIISGK 136
Query: 434 LRGQRAKSMKFVDGLMIHSG 493
L +RA+ K +G++ SG
Sbjct: 137 LTTERARYEKLKEGIVYKSG 156
>UniRef50_A1RXG6 Cluster: 30S ribosomal protein S3P; n=2;
Thermofilum pendens Hrk 5|Rep: 30S ribosomal protein S3P
- Thermofilum pendens (strain Hrk 5)
Length = 202
Score = 56.0 bits (129), Expect = 8e-07
Identities = 31/82 (37%), Positives = 46/82 (56%)
Frame = +2
Query: 254 ESVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGK 433
E+ ++ +V + L A A + L+ G+ RRA L IM +GARG E+V+SGK
Sbjct: 77 ENPQIDVVEVPNQDLNAKIMAYRVARALVRGVRFRRAALVALNRIMAAGARGAEIVISGK 136
Query: 434 LRGQRAKSMKFVDGLMIHSGDP 499
L QR ++ KF G + SG+P
Sbjct: 137 LTSQRHRTEKFTRGYVPKSGEP 158
Score = 47.2 bits (107), Expect = 4e-04
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = +3
Query: 36 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 215
RK + G+ LNE+L R+L Y + TPI +++I+ A V+G KG I+
Sbjct: 6 RKVISQGLQYMMLNEYLQRQLVRANYVHAQFFKTPIGTKVIVYAGVPGLVIGRKGANIKA 65
Query: 216 LTSVVQKRFNI 248
+ V+++ F I
Sbjct: 66 IAEVLEREFGI 76
>UniRef50_Q4JB46 Cluster: 30S ribosomal protein S3P; n=3;
Sulfolobaceae|Rep: 30S ribosomal protein S3P -
Sulfolobus acidocaldarius
Length = 231
Score = 53.6 bits (123), Expect = 5e-06
Identities = 24/72 (33%), Positives = 43/72 (59%)
Frame = +3
Query: 33 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 212
KR F+ K ++E+L ++ Y+GVE+ TPI + +II A R ++G+ G+ I+
Sbjct: 5 KRHFLQKAAIKVMVDEYLAKQFYNAEYAGVEIVKTPIGTRVIIYAGRPPLIIGKGGKTIK 64
Query: 213 ELTSVVQKRFNI 248
+L V++K F +
Sbjct: 65 QLAQVLEKFFGL 76
Score = 49.2 bits (112), Expect = 1e-04
Identities = 30/66 (45%), Positives = 36/66 (54%)
Frame = +2
Query: 296 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDG 475
L A A L L G RRA + +R IM SGA G EV+VSGKL +RAK K +G
Sbjct: 91 LNARVMAFRLAIALEKGYHFRRAAFITIRRIMSSGAVGAEVIVSGKLTSERAKYEKLKEG 150
Query: 476 LMIHSG 493
+ SG
Sbjct: 151 TVYKSG 156
>UniRef50_A5B260 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 414
Score = 53.2 bits (122), Expect = 6e-06
Identities = 25/47 (53%), Positives = 36/47 (76%)
Frame = +3
Query: 93 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 233
++ EDGYS ++V+VT + EIII AT+TQ+ L E GR++RELT V +
Sbjct: 238 DIPEDGYSDIKVKVTGMCMEIIIRATQTQNALIENGRKMRELTLVTR 284
>UniRef50_A0RVX9 Cluster: 30S ribosomal protein S3P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S3P -
Cenarchaeum symbiosum
Length = 261
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/60 (41%), Positives = 37/60 (61%)
Frame = +3
Query: 69 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNI 248
+L EFL + + G+SGVEV P ++I + TR V+G KG IRELT ++K F++
Sbjct: 16 KLREFLRENIKDSGFSGVEVEKNPRGTKITLHVTRPGIVIGRKGVGIRELTERLEKDFDL 75
Score = 38.3 bits (85), Expect = 0.18
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 344 GLAVRRACYGVLRFIMES-GARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 493
G A RRA ++ IME A G ++ +SGKLRG R+ K G++ +G
Sbjct: 106 GTAFRRATMWTIQQIMEKKDAMGVQITISGKLRGDRSAFEKHTSGILPRAG 156
>UniRef50_Q3LWD3 Cluster: Ribosomal protein S3; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 262
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = +2
Query: 356 RRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND 508
R + LRF++ SG RGC + + G R +R K+ KF GL+ HSG ND
Sbjct: 158 RSIIFNTLRFLINSGVRGCMIKLKGVYRSKRTKTFKFRRGLISHSGIQNND 208
>UniRef50_Q9HIR5 Cluster: 30S ribosomal protein S3P; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S3P -
Thermoplasma acidophilum
Length = 225
Score = 48.4 bits (110), Expect = 2e-04
Identities = 18/73 (24%), Positives = 43/73 (58%)
Frame = +3
Query: 30 KKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRI 209
K+RKF+ + V + + E++ +E G+ + ++ TP + I + R V+G +G ++
Sbjct: 2 KERKFINEAVKRLLVCEYVVKETENAGFGNMVMKRTPFGTNITLYVNRPGLVIGRRGSKV 61
Query: 210 RELTSVVQKRFNI 248
+++T ++K++ I
Sbjct: 62 QQMTDTLEKKYGI 74
Score = 43.6 bits (98), Expect = 0.005
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +2
Query: 314 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 493
A+ + L G + R+A L +++GA+G + +SGK+ G+RA+ KF+ G + +SG
Sbjct: 95 AKKIALSLEKGWSYRKAGNTSLNRTIQAGAKGVLIKISGKISGERARYQKFIYGNVKYSG 154
Query: 494 DP 499
+P
Sbjct: 155 EP 156
>UniRef50_A3DNB3 Cluster: 30S ribosomal protein S3P; n=1;
Staphylothermus marinus F1|Rep: 30S ribosomal protein
S3P - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 224
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +2
Query: 356 RRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGD 496
RR +LR +ME+GA G E+++SGKLR +RA+ K G + +GD
Sbjct: 113 RRVAMAMLRRVMEAGAVGAEIIISGKLRSERARYEKLKAGRIYKAGD 159
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/76 (31%), Positives = 41/76 (53%)
Frame = +3
Query: 33 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 212
K F+ + K L+EFL + GY+G+E+ TP ++I A ++G G IR
Sbjct: 7 KSYFIDYSLKKVMLDEFLANYFKDAGYAGMELYKTPTGYRVVIYAEYPGRIIGRGGSIIR 66
Query: 213 ELTSVVQKRFNIPENL 260
+L +++Q F + EN+
Sbjct: 67 KLMTIMQTHFGL-ENV 81
>UniRef50_Q673S3 Cluster: Ribosomal protein S3; n=2; environmental
samples|Rep: Ribosomal protein S3 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 307
Score = 46.8 bits (106), Expect = 5e-04
Identities = 27/81 (33%), Positives = 41/81 (50%)
Frame = +2
Query: 254 ESVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGK 433
E+ L ++ L A A L L G RRA + + IM++GARGC +++SGK
Sbjct: 80 ENPRLEVNEIEEPRLNAQVMASRLASSLERGWFFRRAGHSTAQNIMDAGARGCLIILSGK 139
Query: 434 LRGQRAKSMKFVDGLMIHSGD 496
+ G R + KF G + G+
Sbjct: 140 ISGPRHRVQKFQQGHIKFCGE 160
Score = 41.1 bits (92), Expect = 0.026
Identities = 20/71 (28%), Positives = 37/71 (52%)
Frame = +3
Query: 36 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 215
R F+ V + + E+L RE G+ G+E TP +++ + A + V+G +G+ I E
Sbjct: 9 RTFINRNVERHMVREYLLRETERAGFGGLEFNRTPEGTKVTLSAEQVGRVIGRRGKVIHE 68
Query: 216 LTSVVQKRFNI 248
L ++ F +
Sbjct: 69 LQYRLKSDFKL 79
>UniRef50_Q8ZWI0 Cluster: 30S ribosomal protein S3P; n=6;
Pyrobaculum|Rep: 30S ribosomal protein S3P - Pyrobaculum
aerophilum
Length = 218
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/71 (26%), Positives = 40/71 (56%)
Frame = +3
Query: 36 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 215
+K + + K + EFL L++ GY E+ TP+ + I+I A R ++G KG ++E
Sbjct: 12 KKILEENKKKWMIKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKE 71
Query: 216 LTSVVQKRFNI 248
+++++ + +
Sbjct: 72 ISNILTTKLGV 82
Score = 42.3 bits (95), Expect = 0.011
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +2
Query: 344 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 493
G+ RR + +R +ME+GA+G E+VVSGKL +RA+ K G + G
Sbjct: 116 GVRFRRVMFVAIRQLMEAGAKGFEIVVSGKLSTERARFEKQTYGKLYKIG 165
>UniRef50_A3H696 Cluster: Ribosomal protein S3-like; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3-like -
Caldivirga maquilingensis IC-167
Length = 226
Score = 44.0 bits (99), Expect = 0.004
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +2
Query: 344 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 493
G+ RRA LR + E+ +G EV++SGKL +R++ K+ G++I +G
Sbjct: 104 GIRFRRAAIIALRQLQEANVQGAEVIISGKLTTERSRFEKYTTGIVIKAG 153
Score = 41.5 bits (93), Expect = 0.020
Identities = 16/71 (22%), Positives = 40/71 (56%)
Frame = +3
Query: 36 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 215
++ + D K + E+L L + Y ++ T + + I+I+A + ++G KG++++
Sbjct: 3 KRIIDDNKKKWMIKEYLNIALTRNRYVDSIIQRTTLGTRIVIIAEKKNRIIGRKGQQVKA 62
Query: 216 LTSVVQKRFNI 248
L +++ +FN+
Sbjct: 63 LADILKSKFNL 73
>UniRef50_Q74MZ4 Cluster: 30S ribosomal protein S3P; n=2;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S3P -
Nanoarchaeum equitans
Length = 230
Score = 41.5 bits (93), Expect = 0.020
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +2
Query: 350 AVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 493
A RR L IM +GA G E+V++G+L GQR K+ +F G + +G
Sbjct: 108 AYRRLAQRYLETIMNAGAIGAEIVIAGRLSGQRGKTWRFKAGNLRKTG 155
>UniRef50_A5DF25 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 278
Score = 41.1 bits (92), Expect = 0.026
Identities = 22/75 (29%), Positives = 44/75 (58%)
Frame = -2
Query: 511 RIIARVSRVDHESIYKLH*FGTLTTQLARYNNFTTTGTRFHDETENTIASTTYSETSDKL 332
+++ ++RVDHE++ L G+ ++Q +N T T H ++++T+ +++ +T +L
Sbjct: 104 KVVGWLTRVDHETVRVLLRLGSSSSQFTGDDNLHTLSTSSHGKSQHTVGGSSHWQTVQQL 163
Query: 331 VS*RFGLGDSAKATS 287
FGL DS+ TS
Sbjct: 164 GFQGFGL-DSSGQTS 177
>UniRef50_Q7MTL9 Cluster: 30S ribosomal protein S3; n=19;
Bacteroidetes|Rep: 30S ribosomal protein S3 -
Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 246
Score = 39.5 bits (88), Expect = 0.079
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +2
Query: 248 SRESVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 427
+++ V++ ++ L A AE++ +L G +A RRA + M GA G ++ VS
Sbjct: 94 TKKDVQINIYEIRKPELDAAIVAENIARQLEGKIAYRRAVKMAIASAMRMGAEGIKIQVS 153
Query: 428 GKLRG-QRAKSMKFVDG 475
G+L G + A+S F +G
Sbjct: 154 GRLNGAEMARSEMFKEG 170
>UniRef50_Q9RXJ6 Cluster: 30S ribosomal protein S3; n=2;
Deinococcus|Rep: 30S ribosomal protein S3 - Deinococcus
radiodurans
Length = 249
Score = 38.3 bits (85), Expect = 0.18
Identities = 19/43 (44%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = +2
Query: 350 AVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDG 475
A RRA + +MESGARG +V++SG+L G ++A++ K ++G
Sbjct: 130 AFRRAMKQAAQRVMESGARGVKVILSGRLGGAEQARTEKVLEG 172
>UniRef50_Q52188 Cluster: TraC precursor; n=9; root|Rep: TraC
precursor - Enterococcus faecalis (Streptococcus
faecalis)
Length = 545
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +3
Query: 42 FVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIII 161
FVGDG F+ + EFL +L E+ G++V +TP+ + + +
Sbjct: 397 FVGDGEFEKKAGEFLQGQL-EENLEGLKVNITPVPANVFM 435
>UniRef50_UPI0000DA2268 Cluster: PREDICTED: hypothetical protein;
n=2; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 328
Score = 34.3 bits (75), Expect = 3.0
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 310 PGRISKIQAYRRSRCTSCLLWCSPFHH 390
PGR +A RRSRC+ C W HH
Sbjct: 240 PGRDWSAEASRRSRCSRCCTWSGDIHH 266
>UniRef50_Q04G79 Cluster: 30S ribosomal protein S3; n=1; Oenococcus
oeni PSU-1|Rep: 30S ribosomal protein S3 - Oenococcus
oeni (strain BAA-331 / PSU-1)
Length = 267
Score = 34.3 bits (75), Expect = 3.0
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +2
Query: 194 ERTQNP*AHFRSTEAIQHSRESVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYG 373
ER ++ + T QH R ++ + ++ L A + + L +A RRA G
Sbjct: 86 ERLRSELSKIVDTYKGQHKRVNINIV--EIRKPDLNAHLVGQQIAADLERRVAFRRAMRG 143
Query: 374 VLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDG 475
++ + +GA+G +VSG+L G A+ ++ +G
Sbjct: 144 AIQRVQRAGAKGVRTMVSGRLNGADIARKEQYTEG 178
>UniRef50_Q1AS93 Cluster: Putative uncharacterized protein; n=1;
Rubrobacter xylanophilus DSM 9941|Rep: Putative
uncharacterized protein - Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129)
Length = 106
Score = 33.9 bits (74), Expect = 3.9
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +1
Query: 538 LRQGVLGIKVKIMLPWDQQGKNGPKKATTRPHPGNRAQGRARGPSNPTSEMRSPS 702
+R G +K+ I D G+ ++A H G + AR PS PT+ PS
Sbjct: 1 MRVGFRSVKLAIFDATDNTGRRLLERALAEEHQGTASASSARRPSRPTARHERPS 55
>UniRef50_Q6KI49 Cluster: 30S ribosomal protein S3; n=9;
Mycoplasma|Rep: 30S ribosomal protein S3 - Mycoplasma
mobile
Length = 225
Score = 33.9 bits (74), Expect = 3.9
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 296 LCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVD 472
L AI AE + KL R A +R M+SGA+G + VSG+L G A+S + +
Sbjct: 115 LNAIILAEQIAIKLENRAPFRVAQKFAIRNAMKSGAKGIKTQVSGRLNGVDMARSEGYSE 174
Query: 473 GLM 481
G M
Sbjct: 175 GEM 177
>UniRef50_A6EHQ8 Cluster: 30S ribosomal protein S3; n=1; Pedobacter
sp. BAL39|Rep: 30S ribosomal protein S3 - Pedobacter sp.
BAL39
Length = 281
Score = 33.1 bits (72), Expect = 6.8
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +2
Query: 248 SRESVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 427
+++ +++ ++ L A AE + +L ++ RRA + M GA G +++ S
Sbjct: 94 TKKEIQINIFEIKRPELDAQLVAEGVAKQLEARISFRRAMKSTIAATMRMGAEGIKIMTS 153
Query: 428 GKLRG-QRAKSMKFVDG 475
G+L G + A+S ++ +G
Sbjct: 154 GRLGGAEMARSEQYKEG 170
>UniRef50_Q3EBB8 Cluster: Uncharacterized protein At3g06190.2; n=1;
Arabidopsis thaliana|Rep: Uncharacterized protein
At3g06190.2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 295
Score = 33.1 bits (72), Expect = 6.8
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -1
Query: 221 SELTDSASFLSEHTLCPGGHNNDLRADGSD 132
SEL + + LSEH+L GH +L ADG D
Sbjct: 255 SELLEYVARLSEHSLTSSGHRKELFADGCD 284
>UniRef50_Q39682 Cluster: Glycine-rich protein; n=1; Daucus
carota|Rep: Glycine-rich protein - Daucus carota
(Carrot)
Length = 111
Score = 33.1 bits (72), Expect = 6.8
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +1
Query: 370 WCSPFHHGIWCPWL*SCCIWQAAWSTCQINEVCRW 474
W P G WC W C IW S C+ RW
Sbjct: 32 WWIPPRRGRWCWWRCRCWIWSRLRSWCRSRRRIRW 66
>UniRef50_Q20F10 Cluster: Chloroplast 30S ribosomal protein S3; n=2;
Chlorophyta|Rep: Chloroplast 30S ribosomal protein S3 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 235
Score = 33.1 bits (72), Expect = 6.8
Identities = 24/74 (32%), Positives = 35/74 (47%)
Frame = +2
Query: 221 FRSTEAIQHSRESVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 400
FR+ + + + V L V + AI AE L +L +A RRA VL I
Sbjct: 103 FRAKNGVSPTAK-VALQVTTVQNKSSEAIVIAEFLVNQLERRIAFRRALRRVLSIIQRDR 161
Query: 401 ARGCEVVVSGKLRG 442
+G ++ VSG+L G
Sbjct: 162 VQGAKIQVSGRLNG 175
>UniRef50_UPI0000F1F8B1 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 499
Score = 32.7 bits (71), Expect = 9.0
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +1
Query: 34 SENLLEMGFSRQNSMS--SSLGSWPRTATPAW-KCGSLPSARRSLLWPPGHRVCSERKDA 204
S ++ SR NS+ SS R + W +C L RR+LLW PG VC R+D
Sbjct: 218 SVQFMDYKASRSNSVETHSSERRLQRNPSSEWCECEDLLLRRRALLWRPGGSVC-VREDE 276
Query: 205 ESVSS 219
S S
Sbjct: 277 SSPDS 281
>UniRef50_UPI000069EF05 Cluster: CDNA FLJ12906 fis, clone
NT2RP2004373.; n=2; Xenopus tropicalis|Rep: CDNA
FLJ12906 fis, clone NT2RP2004373. - Xenopus tropicalis
Length = 1119
Score = 32.7 bits (71), Expect = 9.0
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +2
Query: 506 DTSTLLPDMCFSDKEY*ESRSKSCCRGTSKARTARRKPQPDHILVTEPKDEPVAPRTRPA 685
D+S D+CFS +E S + C + + + V +PK E + P TR A
Sbjct: 643 DSSLRNSDLCFSQQEKSSSHAFLCANDNQSMHGSYGSCKEHPVYVQDPKLENLIPVTRTA 702
Query: 686 KCA 694
C+
Sbjct: 703 ACS 705
>UniRef50_A6NXD5 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 283
Score = 32.7 bits (71), Expect = 9.0
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 254 ESVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGK 433
+SV L +V + A AE++ +L + RRA + M GARG + VSG+
Sbjct: 97 KSVALNIVEVKNPDMDAQLIAENIAQQLEKRIGFRRAMKNAMGRAMRMGARGIKTQVSGR 156
Query: 434 LRG-QRAKSMKFVDG 475
L G + A++ + DG
Sbjct: 157 LGGAEIARTEHYHDG 171
>UniRef50_Q5SCB4 Cluster: Cyclin H; n=2; Ostreococcus|Rep: Cyclin H
- Ostreococcus tauri
Length = 322
Score = 32.7 bits (71), Expect = 9.0
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +2
Query: 338 IGGLAVRRACYGVLR----FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMI 484
+ GL R CYG R F+M+ GC+ S +L R K++ VD LM+
Sbjct: 146 LSGLKFRLVCYGATRPLDGFLMDVEDGGCKGATSKQLIECRKKALDIVDRLML 198
>UniRef50_Q9VWU0 Cluster: CG15046-PA; n=2; Sophophora|Rep:
CG15046-PA - Drosophila melanogaster (Fruit fly)
Length = 494
Score = 32.7 bits (71), Expect = 9.0
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 19 TIFQRSENLLEMGFSRQNSMSSSLGSWPRTATPAWKCGSLPS 144
T QRS +L+ +G+ + L P P W CG LP+
Sbjct: 364 TRLQRSGSLVAVGWGKGEDTDCPLFEMPMRLRPTWACGDLPN 405
>UniRef50_Q5XIY2 Cluster: Transmembrane protein 56; n=8;
Euteleostomi|Rep: Transmembrane protein 56 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 264
Score = 32.7 bits (71), Expect = 9.0
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 365 CYGVLRFI-MESGARGCEVVVSGKLRGQRAKSMK 463
C +L I M ARGC V++GKL+G++A S K
Sbjct: 222 CLDILNIIWMYKIARGCYKVITGKLKGRKADSKK 255
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 784,448,529
Number of Sequences: 1657284
Number of extensions: 17014560
Number of successful extensions: 58730
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58682
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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