Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30286
(715 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0008 + 13651997-13652072,13652440-13652541,13653138-136531... 51 8e-07
08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107 50 1e-06
06_01_0830 + 6261629-6261704,6261829-6261974,6262086-6262310,626... 45 5e-05
05_04_0139 + 18355597-18355696,18356665-18356778,18357118-183572... 44 9e-05
01_05_0009 - 17101633-17101836,17101948-17102040,17102122-171023... 42 4e-04
02_05_0782 - 31716860-31717150,31717400-31717612,31718497-317186... 41 8e-04
09_03_0079 + 12142390-12142459,12142792-12143006,12143050-121432... 40 0.003
04_03_0920 + 20826876-20829293 31 0.91
12_01_0471 - 3672309-3672740,3673159-3673251,3673271-3673399,367... 29 2.8
09_04_0202 - 15544498-15545037,15546043-15546449,15546874-155469... 29 3.7
04_03_0923 + 20843477-20845044,20846081-20846996 29 3.7
02_02_0731 + 13470863-13471111,13471122-13471598 29 3.7
10_01_0167 + 1876793-1877402,1877423-1877642,1877760-1879534,188... 28 8.5
06_03_0095 - 16575938-16576585,16577028-16577219,16577294-165773... 28 8.5
03_05_0721 + 27134277-27134666,27135401-27135466,27137036-271371... 28 8.5
02_05_1224 + 35045268-35045270,35045735-35045863,35046037-350461... 28 8.5
>09_04_0008 +
13651997-13652072,13652440-13652541,13653138-13653142,
13653970-13654188,13654686-13654901,13654989-13655078,
13656307-13656507
Length = 302
Score = 51.2 bits (117), Expect = 8e-07
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Frame = +1
Query: 268 LKSELTGNLENVIVALMTPLPH---FYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTI 438
+KSE +GN E ++ ++ + ++AK L ++ G+GTD+ +I ++ T + ++ I
Sbjct: 208 VKSETSGNFELALLTILRCAENPAKYFAKVLRKSMKGMGTDDSTLIRVVVTRTEIDMQYI 267
Query: 439 SAFYEQLYGKSLESDLKGDTSGHSR 513
A Y + Y KSL + +TSG+ R
Sbjct: 268 KAEYYKKYKKSLAEAIHSETSGNYR 292
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 340 AKELHDA-VSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGH 507
AK+L+ A +GTDE+ I I S + ++++ Y +Y +SLE +K +TSG+
Sbjct: 159 AKDLYKAGEKRLGTDEKTFIRIFTERSWAHMASVASAYHHMYDRSLEKVVKSETSGN 215
Score = 32.7 bits (71), Expect = 0.30
Identities = 27/102 (26%), Positives = 41/102 (40%)
Frame = +1
Query: 340 AKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHSRDC 519
A L +A+SG D A EI+C+ + ++ + Y +G LE D+ TSG +
Sbjct: 76 ATVLREALSGDTIDLRAATEIICSRTPSQLQIMKQTYHAKFGTYLEHDIGQRTSGDHQKL 135
Query: 520 ACRCAWPIAMKTRASMKAQLKPMLKHWAAAGEGQWGTDESIF 645
+ + K AGE + GTDE F
Sbjct: 136 LLAYVGIPRYEGPEVDPTIVTHDAKDLYKAGEKRLGTDEKTF 177
Score = 31.1 bits (67), Expect = 0.91
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 134 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKA 256
LRK+MKG GTD+ +I V+ R + I + Y K+
Sbjct: 238 LRKSMKGMGTDDSTLIRVVVTRTEIDMQYIKAEYYKKYKKS 278
>08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107
Length = 346
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Frame = +1
Query: 268 LKSELTGN----LENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRT 435
+KSE +GN L ++ +P +F AK LH+A+ G+GT++ +I ++ T + ++
Sbjct: 251 VKSETSGNFGFGLLTILRCAESPAKYF-AKVLHEAMKGLGTNDTTLIRVVTTRAEVDMQY 309
Query: 436 ISAFYEQLYGKSLESDLKGDTSGHSR 513
I A Y + Y +SL + +TSG+ R
Sbjct: 310 IKAEYHRSYKRSLADAVHSETSGNYR 335
Score = 35.5 bits (78), Expect = 0.042
Identities = 35/137 (25%), Positives = 55/137 (40%), Gaps = 5/137 (3%)
Frame = +1
Query: 250 QGLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGI 429
Q L+ L +EL+G+ + ++ + A LH A++G TD A E++C+ + +
Sbjct: 59 QDLLHRLAAELSGHHKRAVLLWVLDPASRDAAVLHQALNGDVTDMRAATEVVCSRTPSQL 118
Query: 430 RTISAFYEQLY----GKSLESDLKGDTSG-HSRDCACRCAWPIAMKTRASMKAQLKPMLK 594
+ Y + G LE D+ SG H R P A +
Sbjct: 119 LVVRQAYLARFGGGGGGGLEHDVAVRASGDHQRLLLAYLRSPRYEGPEVVDMAAAARDAR 178
Query: 595 HWAAAGEGQWGTDESIF 645
AGE + GTDE F
Sbjct: 179 ELYRAGERRLGTDERTF 195
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/62 (30%), Positives = 25/62 (40%)
Frame = +1
Query: 328 PHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGH 507
P A +LH A G G D A+ IL I Y +Y + L L + SGH
Sbjct: 13 PRRDAIDLHRAFKGFGCDATAVTAILAHRDASQRALIRRHYAAVYHQDLLHRLAAELSGH 72
Query: 508 SR 513
+
Sbjct: 73 HK 74
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 340 AKELHDAVSG-IGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLE 477
A+EL+ A +GTDE I + S + ++A Y +Y +SLE
Sbjct: 177 ARELYRAGERRLGTDERTFIRVFSERSAAHMAAVAAAYHHMYDRSLE 223
>06_01_0830 +
6261629-6261704,6261829-6261974,6262086-6262310,
6262910-6263122,6264007-6264300
Length = 317
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/83 (28%), Positives = 43/83 (51%)
Frame = +1
Query: 256 LISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRT 435
L ++ K E L +I P ++ K + A++G+GTDE ++ I+ T + ++
Sbjct: 222 LKADPKDEFLSTLRAIIRCFCCP-DRYFEKVIRLAIAGMGTDENSLTRIITTRAEVDLKL 280
Query: 436 ISAFYEQLYGKSLESDLKGDTSG 504
I+ Y++ LE + GDTSG
Sbjct: 281 ITEAYQKRNSVPLERAVAGDTSG 303
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 134 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGK 253
LRKA +G+GT+E II +L R QR I + YG+
Sbjct: 20 LRKAFQGWGTNEALIISILAHRDAAQRRAIRRAYADTYGE 59
Score = 34.3 bits (75), Expect = 0.097
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +1
Query: 319 TPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGD 495
T L H AK LH+ + ++ II IL T S + Y YG + DLK D
Sbjct: 167 TKLAHSEAKILHEKIQHKAYGDDEIIRILTTRSKAQLIATFNRYNDEYGHPINKDLKAD 225
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +1
Query: 346 ELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSG 504
+L A G GT+E II IL R I Y YG+ L + + SG
Sbjct: 19 QLRKAFQGWGTNEALIISILAHRDAAQRRAIRRAYADTYGEELLRSITDEISG 71
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +1
Query: 256 LISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGI---GTDEEAIIEILCTLSNYG 426
L+ + E++G+ E ++ L T P L + V+ G+ ++EI C
Sbjct: 61 LLRSITDEISGDFERAVI-LWTLDPAERDAVLANEVARKWYPGSGSRVLVEIACARGPAQ 119
Query: 427 IRTISAFYEQLYGKSLESDLKGDTSGHSR 513
+ + Y + + +SLE D+ +G R
Sbjct: 120 LFAVRQAYHERFKRSLEEDVAAHATGDFR 148
>05_04_0139 +
18355597-18355696,18356665-18356778,18357118-18357263,
18357365-18357910,18358397-18358600
Length = 369
Score = 44.4 bits (100), Expect = 9e-05
Identities = 21/77 (27%), Positives = 43/77 (55%)
Frame = +1
Query: 277 ELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQ 456
+L L+ + L +P HF A+ + ++ G+GTDEE + + + + + + Y+
Sbjct: 281 QLAAVLKAALWCLTSPEKHF-AEVIRTSILGLGTDEEMLTRGIVSRAEVDMEKVKEEYKV 339
Query: 457 LYGKSLESDLKGDTSGH 507
Y ++ +D++GDTSG+
Sbjct: 340 RYNTTVTADVRGDTSGY 356
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = +2
Query: 131 TLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNY 247
++RKA++G+GTDE A+I++L R QR EIA ++ Y
Sbjct: 65 SIRKAVQGWGTDENALIEILGHRTAAQRAEIAVAYEGLY 103
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/74 (35%), Positives = 37/74 (50%)
Frame = +1
Query: 292 LENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKS 471
+ ++ V P P A+ + AV G GTDE A+IEIL + I+ YE LY ++
Sbjct: 47 MASISVPNPAPSPTEDAESIRKAVQGWGTDENALIEILGHRTAAQRAEIAVAYEGLYDET 106
Query: 472 LESDLKGDTSGHSR 513
L L + SG R
Sbjct: 107 LLDRLHSELSGDFR 120
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +1
Query: 340 AKELHDAVSGIG--TDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKG 492
A ELHDAV G G + ++ I+ T S + Y Q +GK ++ L G
Sbjct: 224 AAELHDAVVGRGQALHGDDVVRIVGTRSKAQLAVTLERYRQEHGKGIDEVLDG 276
>01_05_0009 -
17101633-17101836,17101948-17102040,17102122-17102334,
17102514-17102651,17102764-17102909,17106264-17106339
Length = 289
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +2
Query: 134 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGK 253
L KA +G+GTDE+A+I VL R QR +I T++ NY +
Sbjct: 20 LLKAFQGWGTDEQAVIGVLAHRDATQRKQIRLTYEENYNE 59
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/71 (32%), Positives = 36/71 (50%)
Frame = +1
Query: 292 LENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKS 471
+ ++V +TP P A L A G GTDE+A+I +L + I YE+ Y ++
Sbjct: 1 MATIVVPPVTPSPAEDADALLKAFQGWGTDEQAVIGVLAHRDATQRKQIRLTYEENYNEN 60
Query: 472 LESDLKGDTSG 504
L L+ + SG
Sbjct: 61 LIQRLQSELSG 71
Score = 31.5 bits (68), Expect = 0.69
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +1
Query: 250 QGLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSN 420
+ LI L+SEL+G+LE + + A ++ A I D I+EI CT S+
Sbjct: 59 ENLIQRLQSELSGDLERAMYHWVLDPVERQAVMVNTATKCIHEDYAVIVEIACTNSS 115
>02_05_0782 -
31716860-31717150,31717400-31717612,31718497-31718642,
31718742-31718817
Length = 241
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +2
Query: 134 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGK 253
LRKA KG+GT+EK II +L R QR I + YG+
Sbjct: 20 LRKAFKGWGTNEKLIISILAHRDAAQRRAIRRAYAEAYGE 59
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/87 (26%), Positives = 41/87 (47%)
Frame = +1
Query: 256 LISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRT 435
L ++ K E G L +I P ++ K + A+ G+GTDE ++ I+ T + ++
Sbjct: 147 LKADPKDEFLGTLRAIIRCFTCP-DRYFEKVIRLALGGMGTDENSLTRIITTRAEVDLKL 205
Query: 436 ISAFYEQLYGKSLESDLKGDTSGHSRD 516
I Y++ LE + DT+ D
Sbjct: 206 IKEAYQKRNSVPLERAVAKDTTRDYED 232
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 343 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSG 504
++L A G GT+E+ II IL R I Y + YG+ L L + G
Sbjct: 18 EQLRKAFKGWGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEELLRALNDEIHG 71
>09_03_0079 +
12142390-12142459,12142792-12143006,12143050-12143268,
12143345-12143932
Length = 363
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 256 LISELKSELTGNLENVIVALMTPLPHFYAKEL-HDAVSGIGTDEEAIIEILCTLSNYGIR 432
L+S+ S L+G++ + L P ++ DA+ G D + ++E++CT + +
Sbjct: 81 LVSKHISILSGSIAIRVACLRASEPCVRDADIARDALFGRRIDGDVLVEVVCTRPSGEVA 140
Query: 433 TISAFYEQLYGKSLESDLKGDTSG 504
I Y+ Y SLE D+ TSG
Sbjct: 141 LIRQAYQARYSASLERDVSSRTSG 164
>04_03_0920 + 20826876-20829293
Length = 805
Score = 31.1 bits (67), Expect = 0.91
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1
Query: 325 LPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSG 504
LPH A+ + A SG + + CT +YG S ++++LY SD D +G
Sbjct: 366 LPH-NAENVQAATSGDECSQVCLSNCSCTAYSYGKDGCSIWHDELYNVKQLSDASSDRNG 424
>12_01_0471 -
3672309-3672740,3673159-3673251,3673271-3673399,
3673400-3673448,3674291-3674378,3674477-3674573,
3675195-3675278,3675377-3675464,3676589-3676715,
3676774-3676848,3676934-3677042,3677125-3677448,
3677863-3678039
Length = 623
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +1
Query: 259 ISELKSELTGNLENVIVALMTPLPHFY---AKELHDAVSGIGTDEEAIIEILCTLSNYGI 429
IS+L S+ ++++ + PL H + AKE HD + G+G+ + + + L + G
Sbjct: 159 ISDLNSQDKDPIKSIHFSNSNPLCHAFDPEAKEGHDLIIGMGSGDVYSMSLRQQLQDSGR 218
Query: 430 RTISAFYEQLYGKSLESD 483
+ ++A Q Y K + D
Sbjct: 219 KPVAA---QHYNKGVRYD 233
>09_04_0202 -
15544498-15545037,15546043-15546449,15546874-15546977,
15547580-15547788,15548092-15549428,15551680-15551941
Length = 952
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Frame = +1
Query: 286 GNLENV-IVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQL- 459
GN V +++ P Y+ L V D + I C + YG R + YE
Sbjct: 116 GNRSQVPVISFTATSPSLYSASLPYFVRATLNDSAQVQSIACLIKTYGWREVVPIYEDTD 175
Query: 460 YGKSL 474
YG+ +
Sbjct: 176 YGRGI 180
>04_03_0923 + 20843477-20845044,20846081-20846996
Length = 827
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/78 (24%), Positives = 33/78 (42%)
Frame = +1
Query: 271 KSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFY 450
+++ TG + LPH A+ + A S + + CT +YG S ++
Sbjct: 348 RTDRTGLTDKFYPVQSIRLPHS-AENVKVATSADECSQACLSNCSCTAYSYGKSGCSVWH 406
Query: 451 EQLYGKSLESDLKGDTSG 504
++LY SD D +G
Sbjct: 407 DELYNVKQLSDSSSDGNG 424
>02_02_0731 + 13470863-13471111,13471122-13471598
Length = 241
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 477 IGLKRRHVGTLKRLCVSLCMANR-DENQGIDEGSAKADAEALGRRW*RSMGNR 632
+G + R GT+ VSL + R + G +E D A+GRRW R G R
Sbjct: 94 VGRRWRRWGTMA--AVSLAVGRRWGSDGGGEEDGEGVDGAAVGRRWRRRGGRR 144
>10_01_0167 +
1876793-1877402,1877423-1877642,1877760-1879534,
1880019-1880199,1881313-1881529
Length = 1000
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 349 LHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFY 450
L D +S T EE ++ LC LS+Y ++++ Y
Sbjct: 703 LSDKLSKCKTKEEMLLASLCKLSSYKLQSLHIIY 736
>06_03_0095 -
16575938-16576585,16577028-16577219,16577294-16577392,
16577496-16577618,16577717-16577929,16578143-16578251,
16578339-16578427,16578604-16578880,16578974-16579084,
16579160-16580508,16581218-16581631
Length = 1207
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 463 GKSLESDLKGDTSGHSRDCACRCAWPIAMKTRASMKAQLKPMLKH 597
GKSL L+ D D A +CA I ++ KA + ++KH
Sbjct: 817 GKSLTYALEDDVKFKFLDLALKCASVICCRSSPKQKALVTRLVKH 861
>03_05_0721 +
27134277-27134666,27135401-27135466,27137036-27137191,
27137286-27137453,27137544-27137711
Length = 315
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 9/64 (14%)
Frame = -1
Query: 184 VDDSLLIGAEALHSLAKGLGIR-GRVER-----LRGVHRGGALVRV---VLLSAHVEILL 32
VDDSL A+A+H L + LG + GR ++ + +H A+ R+ + L H+ I+
Sbjct: 140 VDDSLAQCAKAVHVLCRALGGKTGRSKKGWDIGVNCIHPTAAMARLFSPIKLPVHMPIIE 199
Query: 31 FNSD 20
F+ D
Sbjct: 200 FHQD 203
>02_05_1224 +
35045268-35045270,35045735-35045863,35046037-35046180,
35046306-35046451,35046583-35046739,35046838-35046896,
35046978-35047137,35047716-35047865,35047969-35048105,
35048186-35048332,35048428-35048540,35048880-35048971,
35049637-35049738,35050108-35050145,35050255-35050381,
35050462-35050632,35050721-35050852,35050929-35051038,
35051118-35051178,35051386-35051427,35051756-35051933,
35052043-35052248,35052843-35052962,35053138-35053182,
35053310-35053408,35053846-35054058,35054254-35054393,
35054469-35054583,35054684-35054722,35054816-35054899,
35054969-35055139,35055891-35056100,35056193-35056378,
35056473-35056601,35056679-35056749,35056834-35056933,
35057016-35057072,35057778-35057834,35057940-35058020,
35058256-35058338,35058448-35058562
Length = 1572
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2
Query: 134 LRKAMKGFGTDEKAIIDVLCRRGIVQRLE 220
L+ A + F DEKA+ D LC+R IV R E
Sbjct: 354 LKTAAELFMCDEKALEDSLCKRIIVTRDE 382
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,509,314
Number of Sequences: 37544
Number of extensions: 380643
Number of successful extensions: 1143
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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