Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30285
         (772 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.67 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   6.2  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   6.2  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   6.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.67
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -3

Query: 218 YYFKILNIHGMYLNLQLQCLPLVTVLILC**FAFWYCCFIIF 93
           Y F I  +H ++L L +    +    +LC    ++YC FIIF
Sbjct: 118 YAFIIFTVHLLFL-LCIYYFVVPLFFLLC--IYYFYCAFIIF 156



 Score = 23.4 bits (48), Expect = 2.0
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +1

Query: 619 LIFVRVKTILY**YY*NKFYILSTYHKLLLYGVLY 723
           L+F  V  IL   YY    +IL T H LLL  + Y
Sbjct: 226 LLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYY 260


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 150  YSFNIMLVIRLLVLLFHYF 94
            + F ++LVI+ + +LFH F
Sbjct: 1332 FFFALILVIQFVAMLFHRF 1350


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 150  YSFNIMLVIRLLVLLFHYF 94
            + F ++LVI+ + +LFH F
Sbjct: 1332 FFFALILVIQFVAMLFHRF 1350


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 150  YSFNIMLVIRLLVLLFHYF 94
            + F ++LVI+ + +LFH F
Sbjct: 1332 FFFALILVIQFVAMLFHRF 1350


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 150  YSFNIMLVIRLLVLLFHYF 94
            + F ++LVI+ + +LFH F
Sbjct: 1332 FFFALILVIQFVAMLFHRF 1350


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 712 HTTVVYDRYLEYKTYFNNII 653
           +TT  YD ++ YKT   NII
Sbjct: 338 YTTATYDSFMIYKT--TNII 355


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 112 IAVSLFLASRSHYRLLNPKKN 50
           I+ S+F+ + S YR+LN   N
Sbjct: 238 ISGSIFMTTTSFYRILNSGYN 258


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 712 HTTVVYDRYLEYKTYFNNII 653
           +TT  YD ++ YKT   NII
Sbjct: 63  YTTATYDSFMIYKT--TNII 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,247
Number of Sequences: 336
Number of extensions: 3409
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)