Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30284
         (724 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long fo...    25   3.1  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    24   4.1  
DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    23   7.2  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   9.6  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   9.6  

>AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long form
           protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +1

Query: 589 SRVNAFSSSTARTLCTYLPTHN 654
           S +NA S S A     YLP HN
Sbjct: 119 SSLNAGSGSCAEVFNAYLPVHN 140


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = +1

Query: 121 WRNSEL*RHSLPNEITVVKNTLIRVYRNNTGTVFFTLGTGSSVL 252
           W N +  R  L +++    N LIR   NNT TV   LG   S L
Sbjct: 31  WANPDAKR--LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQL 72


>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +1

Query: 448 LFIICN*SRNPSSRP*LNNLER 513
           LFIICN + + S R  LN  ER
Sbjct: 351 LFIICNEAHHASKRVGLNFQER 372


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = +2

Query: 569 VTSPAPTHVLMHFHHPQHEHYVPTY 643
           V  P P HVL   HHP   H  P Y
Sbjct: 170 VLLPYPQHVLHPAHHPALLH--PAY 192


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = +2

Query: 569 VTSPAPTHVLMHFHHPQHEHYVPTY 643
           V  P P HVL   HHP   H  P Y
Sbjct: 170 VLLPYPQHVLHPAHHPALLH--PAY 192


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 722,362
Number of Sequences: 2352
Number of extensions: 14852
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)