Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30284
         (724 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y11066-1|CAA71945.1|  750|Drosophila melanogaster klu protein.         29   4.8  
BT025225-1|ABF17916.1|  803|Drosophila melanogaster FI01015p pro...    29   4.8  
BT021253-1|AAX33401.1|  803|Drosophila melanogaster RE58581p pro...    29   4.8  
AE014296-1870|AAF50119.2|  803|Drosophila melanogaster CG12296-P...    29   4.8  

>Y11066-1|CAA71945.1|  750|Drosophila melanogaster klu protein.
          Length = 750

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +2

Query: 578 PAPTHVLMHFHHP-QHEHYVP 637
           P P H L H HHP QH+H++P
Sbjct: 80  PHP-HALQHQHHPHQHQHHLP 99


>BT025225-1|ABF17916.1|  803|Drosophila melanogaster FI01015p
           protein.
          Length = 803

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +2

Query: 578 PAPTHVLMHFHHP-QHEHYVP 637
           P P H L H HHP QH+H++P
Sbjct: 80  PHP-HALQHQHHPHQHQHHLP 99


>BT021253-1|AAX33401.1|  803|Drosophila melanogaster RE58581p
           protein.
          Length = 803

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +2

Query: 578 PAPTHVLMHFHHP-QHEHYVP 637
           P P H L H HHP QH+H++P
Sbjct: 80  PHP-HALQHQHHPHQHQHHLP 99


>AE014296-1870|AAF50119.2|  803|Drosophila melanogaster CG12296-PA
           protein.
          Length = 803

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +2

Query: 578 PAPTHVLMHFHHP-QHEHYVP 637
           P P H L H HHP QH+H++P
Sbjct: 80  PHP-HALQHQHHPHQHQHHLP 99


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,379,509
Number of Sequences: 53049
Number of extensions: 630814
Number of successful extensions: 1833
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1813
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)