Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30283
(703 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 142 1e-32
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 122 1e-26
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 111 1e-23
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 104 2e-21
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 100 3e-20
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 89 1e-16
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 88 2e-16
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 87 5e-16
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 84 3e-15
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 83 6e-15
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 81 3e-14
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 79 1e-13
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 75 1e-12
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 75 2e-12
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 75 2e-12
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 74 4e-12
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 72 2e-11
UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal ... 64 4e-09
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 57 4e-07
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 56 8e-07
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 54 3e-06
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 53 8e-06
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 51 2e-05
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 50 4e-05
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 46 7e-04
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 46 7e-04
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 44 0.004
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 42 0.011
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 42 0.015
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 42 0.019
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 41 0.026
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 36 0.96
UniRef50_A6GVL2 Cluster: Putative cell surface protein SprD; n=1... 35 1.7
UniRef50_Q23TC4 Cluster: Putative uncharacterized protein; n=1; ... 34 2.9
UniRef50_Q231L2 Cluster: Zinc finger, C2H2 type family protein; ... 33 6.8
UniRef50_A2G612 Cluster: SNF7 family protein; n=2; Trichomonas v... 33 6.8
UniRef50_UPI00006CCAA0 Cluster: conserved hypothetical protein; ... 33 9.0
UniRef50_UPI00004999A1 Cluster: 70 kDa heat shock protein; n=4; ... 33 9.0
UniRef50_Q1MQI5 Cluster: Outer membrane protein; n=1; Lawsonia i... 33 9.0
UniRef50_A3LNR4 Cluster: Predicted protein; n=5; Saccharomycetal... 33 9.0
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 33 9.0
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 142 bits (343), Expect = 1e-32
Identities = 66/103 (64%), Positives = 78/103 (75%)
Frame = +2
Query: 2 MRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQS 181
MRNRRR+ RKGPLII+NKDQGLTR+FRNIPGV+ APGGH+GRF+IWTQS
Sbjct: 61 MRNRRRLHRKGPLIIYNKDQGLTRSFRNIPGVDMVNVNKLNLLHLAPGGHVGRFMIWTQS 120
Query: 182 AFGRLDPLFGSWKTPSKQKKNFNLPNRRWPTLTSHVFSSLMRS 310
AF RLD +FGSWKTPSK+KKNFNLP P + + S L++S
Sbjct: 121 AFERLDAIFGSWKTPSKEKKNFNLPQ---PKMANTDLSRLLKS 160
Score = 135 bits (327), Expect = 9e-31
Identities = 67/96 (69%), Positives = 78/96 (81%)
Frame = +1
Query: 229 KTKEELQPAQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPY 408
K K+ QPKMANTDL+RLLKS+EIR+VLRAP KRV+RATRKLNPLTN KAMLKLNPY
Sbjct: 137 KEKKNFNLPQPKMANTDLSRLLKSEEIRRVLRAPIKRVVRATRKLNPLTNTKAMLKLNPY 196
Query: 409 AAVLKRKAILELRRRKNLKALADAEKSGLKLSKQTP 516
AAVLK+KA+L+ +RKN +AL AEK G+KL P
Sbjct: 197 AAVLKKKAVLDQVKRKNKRALEVAEKRGIKLPDDDP 232
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 122 bits (293), Expect = 1e-26
Identities = 55/103 (53%), Positives = 73/103 (70%)
Frame = +2
Query: 2 MRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQS 181
MR+RRRI R+GPL++++KD+GL +AFRNIPG+E APGGH+GRFVIWT+S
Sbjct: 199 MRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTES 258
Query: 182 AFGRLDPLFGSWKTPSKQKKNFNLPNRRWPTLTSHVFSSLMRS 310
AF RL+ LFG+WK PS KK +NLP P + + S L++S
Sbjct: 259 AFARLNDLFGTWKKPSTLKKGYNLPQ---PKMANTDLSRLLKS 298
Score = 109 bits (263), Expect = 5e-23
Identities = 53/84 (63%), Positives = 66/84 (78%)
Frame = +1
Query: 256 QPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAI 435
QPKMANTDL+RLLKS+EIRKVLR P KRV R+ R+LNPLTN + ++KLNPYA VLKR+A
Sbjct: 284 QPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAA 343
Query: 436 LELRRRKNLKALADAEKSGLKLSK 507
L +R K LA A+K ++L+K
Sbjct: 344 LAAEKRTVAKVLAKAKKQNVELAK 367
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 111 bits (268), Expect = 1e-23
Identities = 47/85 (55%), Positives = 61/85 (71%)
Frame = +2
Query: 2 MRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQS 181
MRNRRRIQR+GP II+N+D G+ +AFRNIPG+ APGGH+GRF IWT+S
Sbjct: 196 MRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTES 255
Query: 182 AFGRLDPLFGSWKTPSKQKKNFNLP 256
AF +LD L+G+W+ + K N+NLP
Sbjct: 256 AFRKLDELYGTWRKAASLKSNYNLP 280
Score = 76.2 bits (179), Expect = 7e-13
Identities = 36/68 (52%), Positives = 46/68 (67%)
Frame = +1
Query: 262 KMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILE 441
KM NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA ++R IL
Sbjct: 283 KMINTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILR 342
Query: 442 LRRRKNLK 465
R L+
Sbjct: 343 QARNHKLR 350
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 104 bits (250), Expect = 2e-21
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +2
Query: 2 MRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQS 181
MRNRR +QR+GPL+++++D G+TRAFRNIPGVE APGGH+GRF+IWT+S
Sbjct: 199 MRNRRYVQRRGPLVVYSEDNGVTRAFRNIPGVELCSVDRLGLLTLAPGGHVGRFIIWTKS 258
Query: 182 AFGRLDPLFGSWKTPSKQKKNFNLP 256
AF +LD +FG+ + S KK + P
Sbjct: 259 AFEKLDSIFGTSTSKSASKKGWKPP 283
Score = 62.9 bits (146), Expect = 7e-09
Identities = 40/91 (43%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Frame = +1
Query: 232 TKEELQPAQPKMANTDLTRLLKSDEIRKVLRAPNKRVIR--ATRKLNPLTNNKAMLKLNP 405
+K+ +P MA TDLTRL+ SDEI+ L AP IR A K NPL N AM KLNP
Sbjct: 276 SKKGWKPPTNIMAQTDLTRLINSDEIQSALNAPKLGAIRAHAPLKRNPLKNKSAMDKLNP 335
Query: 406 YAAVLKR-KAILELRRRKNLKALADAEKSGL 495
YA V + +A + R K A ++A +S +
Sbjct: 336 YAKVAREMQARAQEERSKAKAAKSNAARSAV 366
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 100 bits (240), Expect = 3e-20
Identities = 51/104 (49%), Positives = 66/104 (63%), Gaps = 5/104 (4%)
Frame = +2
Query: 2 MRNRRRIQRKGPLIIFNKDQG---LTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIW 172
+R RR QR+GPL+I+N D+ L +AFRNIPGVE APGGHLGRF++W
Sbjct: 175 LRGRRHKQRRGPLVIYNPDEDGKELVKAFRNIPGVETSSVYSMNLLQLAPGGHLGRFIVW 234
Query: 173 TQSAFGRLDPLFGSWKTPSKQKKNFNLPN--RRWPTLTSHVFSS 298
T SAFG LD ++GS PS KK+F LP+ + P L+ + SS
Sbjct: 235 TSSAFGALDTIYGSTTEPSALKKDFLLPSTMMKQPDLSKIINSS 278
Score = 43.6 bits (98), Expect = 0.005
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Frame = +1
Query: 217 EDTIKTKEELQPAQPKMANTDLTRLLKSDEIRKVLR-----APNKRVIRATRKLNPLTNN 381
E + K+ L P+ M DL++++ S +I+KVLR A +KR + +K NPL N
Sbjct: 251 EPSALKKDFLLPST-MMKQPDLSKIINSSDIQKVLRPVRGGAVSKRGV--VQKKNPLKNF 307
Query: 382 KAMLKLNPYAAVLKRKAI 435
+ L+LNPYAA ++ +
Sbjct: 308 QVQLRLNPYAATFSKEKL 325
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 88.6 bits (210), Expect = 1e-16
Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Frame = +2
Query: 2 MRNRRRIQRKGPLIIFN---KDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIW 172
+R RR QR+GPL++++ + L RAFRN+PGVE APGGHLGRF+IW
Sbjct: 198 LRGRRHRQRRGPLVVYDGATDGKELVRAFRNLPGVETCDVYSLNLLQLAPGGHLGRFIIW 257
Query: 173 TQSAFGRLDPLFGSWKTPSKQKKNFNLPN 259
+ SAF LD ++G+ PS KK+F LP+
Sbjct: 258 SSSAFKALDNIYGTTTAPSALKKDFLLPS 286
Score = 44.0 bits (99), Expect = 0.004
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Frame = +1
Query: 235 KEELQPAQPKMANTDLTRLLKSDEIRKVLRAPNKRVI--RA-TRKLNPLTNNKAMLKLNP 405
K+ L P+ ++ D+ RL+ S E++ V+RA + RA +K NPL N + +L+LNP
Sbjct: 280 KDFLLPSNV-VSQADIGRLINSSELQSVIRAAKGSALTKRAGVQKKNPLLNKQVLLRLNP 338
Query: 406 YAAVLKRKAI 435
YAA ++ I
Sbjct: 339 YAAGYSKEKI 348
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 87.8 bits (208), Expect = 2e-16
Identities = 50/120 (41%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Frame = +2
Query: 5 RNRRRIQRKGPLII-FNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQS 181
R ++ RKGPL++ FN++ L +AFRN+PGVE APGG LGRFVIWTQS
Sbjct: 198 RGKKYRVRKGPLVVYFNENAKLLKAFRNVPGVEVVNVTRLNLLQLAPGGQLGRFVIWTQS 257
Query: 182 AFGRLDPLFGSWKTPSKQKKNFNLPNRRWPTLTSHVFSSLMRSG--RSSVLPTNA*SVLH 355
AF LD LFG+++ S K + L P LT+ + ++ S + V P VLH
Sbjct: 258 AFAHLDKLFGTYRYASVLKDGYQLLR---PLLTNPDLARIINSNQVQEKVQPAKTTKVLH 314
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +1
Query: 235 KEELQPAQPKMANTDLTRLLKSDEIR-KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYA 411
K+ Q +P + N DL R++ S++++ KV A +V+ +K NPL N KAM +LNPYA
Sbjct: 276 KDGYQLLRPLLTNPDLARIINSNQVQEKVQPAKTTKVLHDVQKKNPLKNTKAMDRLNPYA 335
Query: 412 AVLKRKAILELR 447
+ A+ ++
Sbjct: 336 KKQRAAAVAAIK 347
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 86.6 bits (205), Expect = 5e-16
Identities = 43/91 (47%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Frame = +2
Query: 2 MRNRRRIQRKGPLIIFNKDQG-LTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQ 178
MRNRR I RKGPLI++ + L +AFRNIPGVE APGGHLGRFVIWT+
Sbjct: 59 MRNRRYISRKGPLIVYGMEGAKLVKAFRNIPGVEVANVDRLNLLKLAPGGHLGRFVIWTK 118
Query: 179 SAFGRLDPLFGSW-KTPSKQKKNFNLPNRRW 268
S+F +LD ++ S+ K +++ P ++W
Sbjct: 119 SSFEKLDSIYRSFEKKLRRRRMGTCCPVKKW 149
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 84.2 bits (199), Expect = 3e-15
Identities = 45/105 (42%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
Frame = +2
Query: 5 RNRRRIQRKGPLII-FNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQS 181
R ++ RKGPL++ FN++ L +AFRN+PGVE APGG LGRFVIWTQS
Sbjct: 44 RGKKYRVRKGPLVVYFNENAKLLKAFRNVPGVEVVNVTRLNLLQLAPGGQLGRFVIWTQS 103
Query: 182 AFGRLDPLFGSWKTPSKQKKNFNLPNRRWPTLTSHVFSSLMRSGR 316
AF LD LFG+++ S K + L P LT+ + ++ S +
Sbjct: 104 AFANLDKLFGTYRYSSILKDGYQLLR---PLLTNPDLARIINSNQ 145
Score = 49.6 bits (113), Expect = 7e-05
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = +1
Query: 235 KEELQPAQPKMANTDLTRLLKSDEIR-KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYA 411
K+ Q +P + N DL R++ S++++ KV A V+ +K NPL N+KA+ +LNPYA
Sbjct: 122 KDGYQLLRPLLTNPDLARIINSNQVQEKVQAAKQTTVLHEVQKKNPLKNSKALDRLNPYA 181
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 83.0 bits (196), Expect = 6e-15
Identities = 42/102 (41%), Positives = 62/102 (60%)
Frame = +2
Query: 5 RNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSA 184
RNRR QR+G LI+ ++++GL AFRNI GV+ APGGHLGRF+IWT+ A
Sbjct: 197 RNRRYTQRRGVLIVHDQNEGLANAFRNISGVDISNVXRLNIRDLAPGGHLGRFIIWTEGA 256
Query: 185 FGRLDPLFGSWKTPSKQKKNFNLPNRRWPTLTSHVFSSLMRS 310
+ +LD L+G+ + K + P P++T+ S ++ S
Sbjct: 257 YKKLDKLYGTRFRTALLKNEYKHPT---PSVTNTDLSRIIHS 295
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 80.6 bits (190), Expect = 3e-14
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 MRNRRRIQRKGPLIIF-NKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQ 178
MR R+ +RKGPL+++ N D +AFRNIPGV+ APG H+GRF+IWT+
Sbjct: 197 MRGRKIKERKGPLVVYGNDDLQAVKAFRNIPGVDTCRVENLSVLNLAPGCHIGRFIIWTE 256
Query: 179 SAFGRLDPLFGSWKTPSKQKKNFNL 253
SAF +L+ +FG+ K ++ K F +
Sbjct: 257 SAFKKLNTIFGTQKKMAQGKSGFRI 281
Score = 43.2 bits (97), Expect = 0.006
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Frame = +1
Query: 235 KEELQPAQPKMANTDLTRLLKSDEIRKVLRAPNKRVI-RATRKLNPLTNNKAMLKLNPYA 411
K + A +MA D+ R++ + E K+LRA K V+ + ++ NPL N AM+KLNPYA
Sbjct: 276 KSGFRIAHAQMAVPDMKRVVVAAEKAKLLRA--KIVLPKVPKRANPLKNWAAMVKLNPYA 333
Query: 412 AVLKRKAILELRRRKNLKALADAEKSGLKLSKQTPL 519
+ K + + KA A+ + +K+ L
Sbjct: 334 KIASHKLAQVAKAQAAHKAQYAAKMEKILAAKKEAL 369
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 78.6 bits (185), Expect = 1e-13
Identities = 37/85 (43%), Positives = 50/85 (58%)
Frame = +2
Query: 2 MRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQS 181
MRNR+ GPLII++ D G+ +AFRNIPGV+ APGG +GR IW++
Sbjct: 196 MRNRKYKISNGPLIIYSXDSGIKKAFRNIPGVDLCNVTKLNLLKLAPGGSIGRLCIWSED 255
Query: 182 AFGRLDPLFGSWKTPSKQKKNFNLP 256
AF +LD ++G KKN+ LP
Sbjct: 256 AFKKLDVIYGKTFQKYVTKKNYILP 280
Score = 37.5 bits (83), Expect = 0.32
Identities = 19/73 (26%), Positives = 38/73 (52%)
Frame = +1
Query: 232 TKEELQPAQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYA 411
TK+ +P + N D+ R++ SD+++ L + T+ N LTN +LNP
Sbjct: 273 TKKNYILPKPIVNNADIYRIINSDQVQASLLDKKSPCKKRTQNKNSLTNFAVRCRLNPAY 332
Query: 412 AVLKRKAILELRR 450
+L+ A+ ++++
Sbjct: 333 KLLRALAVRKMKK 345
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/85 (43%), Positives = 51/85 (60%)
Frame = +2
Query: 2 MRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQS 181
MRNRR I RKGPL+I+N + + R FRN+PGV+ APG H GR ++WT+S
Sbjct: 184 MRNRRYITRKGPLVIYNTED-VARGFRNLPGVDLCHVSSIRLLELAPGSHPGRLILWTKS 242
Query: 182 AFGRLDPLFGSWKTPSKQKKNFNLP 256
AF LD ++ + K+N+ LP
Sbjct: 243 AFASLDDVYAA-------KQNYTLP 260
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 74.9 bits (176), Expect = 2e-12
Identities = 39/83 (46%), Positives = 52/83 (62%)
Frame = +1
Query: 262 KMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILE 441
KM NTDL+R+LKS EI++ L+AP K++ R K NPL N MLKLNPYA ++R I
Sbjct: 122 KMLNTDLSRILKSPEIQRALQAPRKKIHRRVLKKNPLKNLGIMLKLNPYAKTMRRNTI-- 179
Query: 442 LRRRKNLKALADAEKSGLKLSKQ 510
LR+ KN K D + L+ +
Sbjct: 180 LRQAKNHKLRMDKSAAALEAKSE 202
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/103 (35%), Positives = 56/103 (54%)
Frame = +2
Query: 2 MRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQS 181
MRNRRR+ GPL+++ +D G+ +A RNI GV+ APGG GR I+T+
Sbjct: 199 MRNRRRVCAVGPLVVYAEDNGIVKAMRNIKGVDTCSVERLNLLRLAPGGTFGRLTIFTKG 258
Query: 182 AFGRLDPLFGSWKTPSKQKKNFNLPNRRWPTLTSHVFSSLMRS 310
A RL ++GS+ S K + LP P +T+ + ++ S
Sbjct: 259 AIKRLQEIYGSYTHGSSSKVGYTLPR---PAMTNADITRIINS 298
Score = 37.5 bits (83), Expect = 0.32
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Frame = +1
Query: 256 QPKMANTDLTRLLKSDEIRKVLRAPN-----KRVIRATRKLNPLTNNKAMLKLNPYAAVL 420
+P M N D+TR++ S E++ VLR + R+ K N LTN LNP L
Sbjct: 284 RPAMTNADITRIINSTEVQSVLRPLRGFRCMGSMGRSKTKKNNLTNLTKRACLNPAYTSL 343
Query: 421 KRKAILELRRRKNLKALADAEKSGLKLSKQT 513
++ A L L A+ +K+ + K++
Sbjct: 344 RKSARLAQIPGTRLHAIKQRQKAANRALKKS 374
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 73.7 bits (173), Expect = 4e-12
Identities = 38/87 (43%), Positives = 49/87 (56%)
Frame = +2
Query: 2 MRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQS 181
MRNRR QRKG LI+ + + FRNI GV+ APGG GR +IWT+S
Sbjct: 193 MRNRRYTQRKGILIVHGESSEML-GFRNIRGVDQMSIDSLDLLELAPGGVAGRLIIWTES 251
Query: 182 AFGRLDPLFGSWKTPSKQKKNFNLPNR 262
AF +LD +FG + ++ F LPNR
Sbjct: 252 AFEKLDKIFGGVEREAELTPGFKLPNR 278
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 71.7 bits (168), Expect = 2e-11
Identities = 34/77 (44%), Positives = 47/77 (61%)
Frame = +2
Query: 26 RKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPL 205
+KGPL+I+N+D+G+ +AFRNIPGVE AP +GR +WT+SAF LD +
Sbjct: 201 KKGPLVIYNEDKGIVKAFRNIPGVETISVKALALAKLAPAAQVGRLTVWTESAFKALDGI 260
Query: 206 FGSWKTPSKQKKNFNLP 256
+ S KK F+LP
Sbjct: 261 YES-------KKRFSLP 270
>UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal
protein L4; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L4 - Rattus norvegicus
Length = 140
Score = 63.7 bits (148), Expect = 4e-09
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +1
Query: 262 KMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAIL- 438
KM N+DL+R+LK EI++ L+AP K + K NPLTN + MLKLNP A + R IL
Sbjct: 3 KMMNSDLSRILKIPEIQRALQAPCKEIQHRVSKKNPLTNLRIMLKLNPDAKTMHRNTILP 62
Query: 439 ELRRRK-NLKALADAEKSGLKL 501
E R K +K+ ++G +L
Sbjct: 63 EARNHKLQVKSRKQQPRTGSQL 84
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 57.2 bits (132), Expect = 4e-07
Identities = 24/61 (39%), Positives = 36/61 (59%)
Frame = +2
Query: 2 MRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQS 181
MR RR +++K L++ KD G+ +A +N+PGV+ APG H GR +WT+S
Sbjct: 183 MRGRRYVKKKSVLLVVGKDDGVVKAAKNLPGVDAVVVKDLNVELLAPGCHPGRLTVWTKS 242
Query: 182 A 184
A
Sbjct: 243 A 243
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 56.0 bits (129), Expect = 8e-07
Identities = 28/49 (57%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = +1
Query: 262 KMANTDLTRLLKSDEIRKVLRAPNKRV-IRATRKLNPLTNNKAMLKLNP 405
KM NTDL+R+LK I++ LRAP KR+ R +K NPL N + MLKLNP
Sbjct: 200 KMLNTDLSRILKRPGIQRALRAPRKRIHRRVLKKKNPLKNLRLMLKLNP 248
Score = 36.7 bits (81), Expect(2) = 8e-05
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 2 MRNRRRIQRKGPLIIFNKDQGLTRA 76
MRNRR IQR+G II+N+D G+ +A
Sbjct: 137 MRNRRPIQRRGSCIIYNEDNGIIKA 161
Score = 32.3 bits (70), Expect(2) = 8e-05
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 182 AFGRLDPLFGSWKTPSKQKKNFNLP 256
AF +LD L+G+W + K N+NLP
Sbjct: 173 AFCKLDDLYGTWPKAASLKSNYNLP 197
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 54.0 bits (124), Expect = 3e-06
Identities = 25/66 (37%), Positives = 36/66 (54%)
Frame = +2
Query: 2 MRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQS 181
MR R+ K L++ ++ GL +A RNIPGV+ APGG GR +WT++
Sbjct: 239 MRGRKYRTPKSILLVVSQTNGLAKAARNIPGVDIVVAKDLSAEDLAPGGDAGRLTVWTKA 298
Query: 182 AFGRLD 199
A G L+
Sbjct: 299 AIGALE 304
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 52.8 bits (121), Expect = 8e-06
Identities = 35/85 (41%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +2
Query: 5 RNRRRIQRKGPLIIFNKD--QGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQ 178
R+ R+ + GPLII +G RAFRNIPGVE AP G LGR +W++
Sbjct: 190 RDGRKKRPVGPLIILRATAVEG-KRAFRNIPGVEVACVERLNLLKLAPAGALGRLCVWSK 248
Query: 179 SAFGRLDPLFGSWKTPSKQKKNFNL 253
SAF LD P+K KN +L
Sbjct: 249 SAFEALDDYIK--MMPTKLLKNADL 271
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/69 (36%), Positives = 36/69 (52%)
Frame = +2
Query: 2 MRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQS 181
+R R+ KGPL++ D+G++ RN GV+ APG H GR I+T+S
Sbjct: 186 LRGRKYRTPKGPLVVVGNDRGISLGARNHAGVDVVEVNNINAELLAPGTHAGRLTIYTKS 245
Query: 182 AFGRLDPLF 208
A +L LF
Sbjct: 246 AIEKLGDLF 254
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 50.4 bits (115), Expect = 4e-05
Identities = 25/68 (36%), Positives = 36/68 (52%)
Frame = +2
Query: 2 MRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQS 181
MRNRR + GPL++F + ++ RNI ++ APGGHLGR IW+
Sbjct: 190 MRNRRFKKPTGPLLVFKNN---LKSLRNIANIDCMKISALNLTKLAPGGHLGRLCIWSSK 246
Query: 182 AFGRLDPL 205
AF L+ +
Sbjct: 247 AFQMLNTI 254
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 46.4 bits (105), Expect = 7e-04
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Frame = +2
Query: 5 RNRRRIQRK--GPLIIFNKD--QGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIW 172
R +R+ +++ GPL++ +G RAFRNIPGV+ AP G LGR VI+
Sbjct: 187 RTKRKGKKRPVGPLVVMRSTAVEG-KRAFRNIPGVDVMSVEHMNLLKLAPAGTLGRLVIF 245
Query: 173 TQSAFGRLD 199
++SAF LD
Sbjct: 246 SKSAFELLD 254
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/69 (33%), Positives = 34/69 (49%)
Frame = +2
Query: 5 RNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSA 184
R RR ++ K LI+ ++D+G+ RN PGV+ APG H GR ++T A
Sbjct: 191 RGRRYVKPKSVLIVVDEDEGIKLGARNHPGVDVVEAMHLGVEHLAPGAHPGRLTVFTPGA 250
Query: 185 FGRLDPLFG 211
L+ G
Sbjct: 251 LEVLEERLG 259
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +2
Query: 2 MRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGG 148
MRNRR + R+GP+++ ++G TRAFRNI G++ APGG
Sbjct: 195 MRNRRYVARRGPMLVMPNNKG-TRAFRNIFGLDLANVSALTLLHLAPGG 242
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 42.3 bits (95), Expect = 0.011
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 2 MRNRRRIQRKGPLIIFNKDQG-LTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQ 178
MR R+ + GPLII + + +A RN+ GV+ APG H GR I+T+
Sbjct: 192 MRGRKYKEPIGPLIIVHDSNSPIIKAARNLAGVDVVNAKDVSVIHLAPGAHPGRLTIYTE 251
Query: 179 SAFGRLD 199
S+ LD
Sbjct: 252 SSIKILD 258
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 41.9 bits (94), Expect = 0.015
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +2
Query: 2 MRNRRRIQRKGPLIIFNK-DQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQ 178
MR RR + K L++ + + L A RN PGV+ APGG GR +WT
Sbjct: 213 MRGRRYKEPKSVLVVVSDLNAPLIAAVRNFPGVDVVAVNNLNILVLAPGGVPGRLTLWTA 272
Query: 179 SAFGRLDPLF 208
A +L LF
Sbjct: 273 PAVEKLRGLF 282
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 41.5 bits (93), Expect = 0.019
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 5 RNRRRIQRKGPLIIFNK-DQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQS 181
R R I+RKGPLI+ N ++ L +A NIPG++ APG GR +I ++
Sbjct: 197 RGRAYIERKGPLIVVNDYNEQLFKAVDNIPGLDIEEVPNLNVELLAPGAKPGRLLIISKD 256
Query: 182 AFGRL 196
A L
Sbjct: 257 ALETL 261
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 41.1 bits (92), Expect = 0.026
Identities = 24/65 (36%), Positives = 32/65 (49%)
Frame = +2
Query: 2 MRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQS 181
MR RR Q K LI+ + +AFR++PGV+ APGG GR I+T+
Sbjct: 187 MRGRRYKQPKSVLIVARNSSAM-KAFRSLPGVDIASPNSLSIRKLAPGGVGGRLTIFTEG 245
Query: 182 AFGRL 196
A L
Sbjct: 246 AIESL 250
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 35.9 bits (79), Expect = 0.96
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +2
Query: 2 MRNRRRIQRKGPLIIFNKDQG-LTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQ 178
MR RR K L + + L A + +PGV+ APGGH GR I+T
Sbjct: 198 MRGRRYKVPKSVLFVLEDPRSPLALAVKGMPGVDVVTPTLLSVLHLAPGGHPGRLTIYTT 257
Query: 179 SAFGRLDPLF 208
A L F
Sbjct: 258 EALKLLSRRF 267
>UniRef50_A6GVL2 Cluster: Putative cell surface protein SprD; n=1;
Flavobacterium psychrophilum JIP02/86|Rep: Putative cell
surface protein SprD - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 1286
Score = 35.1 bits (77), Expect = 1.7
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +1
Query: 334 KRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEK 486
K +++AT+K NP T N + K P +R L L+ K+ KA A+AEK
Sbjct: 310 KPIVKATKKTNPGTKNATVNKKTPADLQKERAEALALKTEKD-KARAEAEK 359
>UniRef50_Q23TC4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 966
Score = 34.3 bits (75), Expect = 2.9
Identities = 19/62 (30%), Positives = 35/62 (56%)
Frame = +1
Query: 256 QPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAI 435
Q K AN + RLL S+ + ++P+ ++ KLNP++ N + L LN + L +K++
Sbjct: 330 QHKRANIQV-RLLSSEISKNQSQSPSNNILNQQNKLNPISTNTSQL-LNKQISQLNQKSL 387
Query: 436 LE 441
+
Sbjct: 388 TQ 389
>UniRef50_Q231L2 Cluster: Zinc finger, C2H2 type family protein;
n=1; Tetrahymena thermophila SB210|Rep: Zinc finger,
C2H2 type family protein - Tetrahymena thermophila SB210
Length = 193
Score = 33.1 bits (72), Expect = 6.8
Identities = 28/97 (28%), Positives = 45/97 (46%)
Frame = +1
Query: 229 KTKEELQPAQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPY 408
K ++++Q + + + LT +LK D+IR +R N+ + A KLN L A K N
Sbjct: 66 KQEDQVQRKRFTLNASSLTNILK-DQIRTNIRLDNQEIKNANNKLNQL-GMDAQAK-NLA 122
Query: 409 AAVLKRKAILELRRRKNLKALADAEKSGLKLSKQTPL 519
+ K+ L ++K LK + GL Q L
Sbjct: 123 EVLCKKSDDLVKEQQKKLKFICGYMSCGLGFQDQREL 159
>UniRef50_A2G612 Cluster: SNF7 family protein; n=2; Trichomonas
vaginalis G3|Rep: SNF7 family protein - Trichomonas
vaginalis G3
Length = 199
Score = 33.1 bits (72), Expect = 6.8
Identities = 23/77 (29%), Positives = 38/77 (49%)
Frame = +1
Query: 235 KEELQPAQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAA 414
K++ P QP+++ D SD++ + + +K + RKL+ LT M
Sbjct: 7 KKKDVPQQPQVSLEDT-----SDQLGRKSESIDKEIAEINRKLSELTKQMKMPSNKSRVP 61
Query: 415 VLKRKAILELRRRKNLK 465
L+RKA L+RRK L+
Sbjct: 62 TLRRKATELLKRRKMLE 78
>UniRef50_UPI00006CCAA0 Cluster: conserved hypothetical protein;
n=1; Tetrahymena thermophila SB210|Rep: conserved
hypothetical protein - Tetrahymena thermophila SB210
Length = 1216
Score = 32.7 bits (71), Expect = 9.0
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Frame = +1
Query: 208 RVMEDTIKTKEELQPAQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA 387
R E+ + K+E+Q Q +M RL + DE+++ + K+ L +
Sbjct: 226 RKREEIQRKKDEIQRKQEQMRLEQEQRLKQQDELQRKRQEQEKKFNEQRELLEKQRQEQE 285
Query: 388 MLKLNPYAA-------VLKRKAIL-ELRRRK---NLKALADAEKSGLKLSKQ 510
+LK A L+RK +L +L+R+K +K A+ E++ L+L KQ
Sbjct: 286 LLKKQREEAERRRREQELQRKKMLDDLQRQKEEQEIKKKAEEEEAALRLQKQ 337
>UniRef50_UPI00004999A1 Cluster: 70 kDa heat shock protein; n=4;
Entamoeba histolytica HM-1:IMSS|Rep: 70 kDa heat shock
protein - Entamoeba histolytica HM-1:IMSS
Length = 672
Score = 32.7 bits (71), Expect = 9.0
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 11/129 (8%)
Frame = +1
Query: 94 CGXXXXXXXXXXXXGSGRPSWTFRHLDSVRIRQA*PLIRVMEDTIKTKE-ELQPAQP-KM 267
CG G G P T+ LD IR + ++ +++T++TK EL +P K
Sbjct: 216 CGGGTTDVACCITNGDGMP--TYEKLDDEEIRNS--ILDKVKETLQTKPGELYLFEPTKW 271
Query: 268 ANTDLTRLLKSD---EIRKVLRAPNKRVIRA------TRKLNPLTNNKAMLKLNPYAAVL 420
TR LK D I K+ R+ + ++ + T ++NP NN+ LKL +
Sbjct: 272 YELPSTRQLKRDVYLSIDKLTRSASGKLNQDKPFTFNTSEINPNWNNEITLKLKDFRKQQ 331
Query: 421 KRKAILELR 447
+ A+ E++
Sbjct: 332 EPNALNEIK 340
>UniRef50_Q1MQI5 Cluster: Outer membrane protein; n=1; Lawsonia
intracellularis PHE/MN1-00|Rep: Outer membrane protein -
Lawsonia intracellularis (strain PHE/MN1-00)
Length = 601
Score = 32.7 bits (71), Expect = 9.0
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 361 LNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSG 492
LNP+ KA L + PY K+K IL LR R + D K+G
Sbjct: 419 LNPIQGTKATLNVTPYIGKYKKK-ILTLRSRFDFSFYIDVLKTG 461
>UniRef50_A3LNR4 Cluster: Predicted protein; n=5;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 233
Score = 32.7 bits (71), Expect = 9.0
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Frame = +1
Query: 277 DLTRLLKSDEIRKVLRAPNKRVIRATR--KLNPLTNNKAMLKLNPYAAVL---KRKAILE 441
D+ RLLK D++ +R N+R ++A + N N KA Y V K+KA+ +
Sbjct: 36 DIERLLKKDKLPADVRTENERAVKALKVELQNTQFNLKAKQVAKKYHMVRFFEKKKAVRK 95
Query: 442 LRR-RKNLKALA--DAEKSGLKLSKQ 510
L++ KNL+ ++ D K K KQ
Sbjct: 96 LKQANKNLEDISKTDVRKDIKKARKQ 121
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 32.7 bits (71), Expect = 9.0
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +2
Query: 14 RRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGR 193
R+ +R ++ D+ T A RN+ G + APGG GR ++T+SA
Sbjct: 184 RKYRRPASILFVTSDEPSTAA-RNLAGADVATASEVNTEDLAPGGAPGRLTVFTESALAE 242
Query: 194 L 196
+
Sbjct: 243 V 243
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,155,746
Number of Sequences: 1657284
Number of extensions: 11283394
Number of successful extensions: 29786
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 28612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29752
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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