Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30283
         (703 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   1.7  
DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide...    24   4.0  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    23   7.0  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -2

Query: 210 PNKGSSLPNAD*VQMTKRPRWPPGA 136
           P  G   P    V M  RP+ PPGA
Sbjct: 212 PRPGGMYPQPPGVPMPMRPQMPPGA 236


>DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide F
           prepropeptide protein.
          Length = 234

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = +2

Query: 185 FGRLDPLFGSWKTPSKQKKNF--NLPNRRWPTLTSHVFSSLM 304
           FGR DPL+ S+   +  ++NF    P++R     S++F +L+
Sbjct: 101 FGRNDPLWTSFNENALLEENFEKRAPSQRLRWGRSNLFGNLV 142


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +2

Query: 230 KQKKNFNLPNRRWPTLTSHVFSSL--MRSGRSSVLPTNA 340
           KQ++   LP ++WPT+   V +    +    SS +P  A
Sbjct: 200 KQQRQQRLPAQQWPTVQQSVRAQRQGVTESASSAVPDEA 238


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,012
Number of Sequences: 2352
Number of extensions: 11839
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)