Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30283
(703 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 122 6e-28
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 122 6e-28
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 122 6e-28
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 52 8e-07
AY070560-1|AAL48031.1| 712|Drosophila melanogaster LD33051p pro... 31 2.0
AF173549-1|AAL29184.1| 712|Drosophila melanogaster mystery 45A ... 31 2.0
AE013599-787|AAF58986.2| 712|Drosophila melanogaster CG8070-PA ... 31 2.0
M74329-1|AAA28747.1| 2483|Drosophila melanogaster pcx protein. 29 6.1
AL009195-1|CAA15708.1| 3345|Drosophila melanogaster EG:30B8.4,FB... 29 6.1
AE014298-365|AAF45756.2| 3433|Drosophila melanogaster CG3443-PB ... 29 6.1
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 122 bits (293), Expect = 6e-28
Identities = 55/103 (53%), Positives = 73/103 (70%)
Frame = +2
Query: 2 MRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQS 181
MR+RRRI R+GPL++++KD+GL +AFRNIPG+E APGGH+GRFVIWT+S
Sbjct: 199 MRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVDKLNVLKLAPGGHVGRFVIWTES 258
Query: 182 AFGRLDPLFGSWKTPSKQKKNFNLPNRRWPTLTSHVFSSLMRS 310
AF RL+ LFG+WK PS KK +NLP P + + S L++S
Sbjct: 259 AFARLNDLFGTWKKPSTLKKGYNLPQ---PKMANTDLSRLLKS 298
Score = 109 bits (263), Expect = 3e-24
Identities = 53/84 (63%), Positives = 66/84 (78%)
Frame = +1
Query: 256 QPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAI 435
QPKMANTDL+RLLKS+EIRKVLR P KRV R+ R+LNPLTN + ++KLNPYA VLKR+A
Sbjct: 284 QPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAA 343
Query: 436 LELRRRKNLKALADAEKSGLKLSK 507
L +R K LA A+K ++L+K
Sbjct: 344 LAAEKRTVAKVLAKAKKQNVELAK 367
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 122 bits (293), Expect = 6e-28
Identities = 55/103 (53%), Positives = 73/103 (70%)
Frame = +2
Query: 2 MRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQS 181
MR+RRRI R+GPL++++KD+GL +AFRNIPG+E APGGH+GRFVIWT+S
Sbjct: 199 MRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTES 258
Query: 182 AFGRLDPLFGSWKTPSKQKKNFNLPNRRWPTLTSHVFSSLMRS 310
AF RL+ LFG+WK PS KK +NLP P + + S L++S
Sbjct: 259 AFARLNDLFGTWKKPSTLKKGYNLPQ---PKMANTDLSRLLKS 298
Score = 109 bits (263), Expect = 3e-24
Identities = 53/84 (63%), Positives = 66/84 (78%)
Frame = +1
Query: 256 QPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAI 435
QPKMANTDL+RLLKS+EIRKVLR P KRV R+ R+LNPLTN + ++KLNPYA VLKR+A
Sbjct: 284 QPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAA 343
Query: 436 LELRRRKNLKALADAEKSGLKLSK 507
L +R K LA A+K ++L+K
Sbjct: 344 LAAEKRTVAKVLAKAKKQNVELAK 367
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 122 bits (293), Expect = 6e-28
Identities = 55/103 (53%), Positives = 73/103 (70%)
Frame = +2
Query: 2 MRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQS 181
MR+RRRI R+GPL++++KD+GL +AFRNIPG+E APGGH+GRFVIWT+S
Sbjct: 199 MRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTES 258
Query: 182 AFGRLDPLFGSWKTPSKQKKNFNLPNRRWPTLTSHVFSSLMRS 310
AF RL+ LFG+WK PS KK +NLP P + + S L++S
Sbjct: 259 AFARLNDLFGTWKKPSTLKKGYNLPQ---PKMANTDLSRLLKS 298
Score = 109 bits (263), Expect = 3e-24
Identities = 53/84 (63%), Positives = 66/84 (78%)
Frame = +1
Query: 256 QPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAI 435
QPKMANTDL+RLLKS+EIRKVLR P KRV R+ R+LNPLTN + ++KLNPYA VLKR+A
Sbjct: 284 QPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAA 343
Query: 436 LELRRRKNLKALADAEKSGLKLSK 507
L +R K LA A+K ++L+K
Sbjct: 344 LAAEKRTVAKVLAKAKKQNVELAK 367
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 52.0 bits (119), Expect = 8e-07
Identities = 20/30 (66%), Positives = 28/30 (93%)
Frame = +2
Query: 2 MRNRRRIQRKGPLIIFNKDQGLTRAFRNIP 91
MR+RRRI R+GPL++++KD+GL +AFRNIP
Sbjct: 199 MRDRRRIARRGPLVVYDKDEGLRKAFRNIP 228
>AY070560-1|AAL48031.1| 712|Drosophila melanogaster LD33051p
protein.
Length = 712
Score = 30.7 bits (66), Expect = 2.0
Identities = 24/94 (25%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Frame = +1
Query: 229 KTKEELQPAQPKMANTDL--TRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA-MLKL 399
K K++++ K A +L TR+ ++ +++ A K+ + + RK PL ++A +KL
Sbjct: 566 KEKKDMRILNQKEAAQELALTRIFTDEDFKRINAANLKKTVTSARK-RPLEQDRAEFVKL 624
Query: 400 NPYAAVLKRKAILELRRRKNLKA-LADAEKSGLK 498
N + K++ + R + ++A D E+ G K
Sbjct: 625 NSIEMIYKKRKHDKESRLETVQAGRQDRERFGWK 658
>AF173549-1|AAL29184.1| 712|Drosophila melanogaster mystery 45A
protein.
Length = 712
Score = 30.7 bits (66), Expect = 2.0
Identities = 24/94 (25%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Frame = +1
Query: 229 KTKEELQPAQPKMANTDL--TRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA-MLKL 399
K K++++ K A +L TR+ ++ +++ A K+ + + RK PL ++A +KL
Sbjct: 566 KEKKDMRILNQKEAAQELALTRIFTDEDFKRINAANLKKTVTSARK-RPLEQDRAEFVKL 624
Query: 400 NPYAAVLKRKAILELRRRKNLKA-LADAEKSGLK 498
N + K++ + R + ++A D E+ G K
Sbjct: 625 NSIEMIYKKRKHDKESRLETVQAGRQDRERFGWK 658
>AE013599-787|AAF58986.2| 712|Drosophila melanogaster CG8070-PA
protein.
Length = 712
Score = 30.7 bits (66), Expect = 2.0
Identities = 24/94 (25%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Frame = +1
Query: 229 KTKEELQPAQPKMANTDL--TRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA-MLKL 399
K K++++ K A +L TR+ ++ +++ A K+ + + RK PL ++A +KL
Sbjct: 566 KEKKDMRILNQKEAAQELALTRIFTDEDFKRINAANLKKTVTSARK-RPLEQDRAEFVKL 624
Query: 400 NPYAAVLKRKAILELRRRKNLKA-LADAEKSGLK 498
N + K++ + R + ++A D E+ G K
Sbjct: 625 NSIEMIYKKRKHDKESRLETVQAGRQDRERFGWK 658
>M74329-1|AAA28747.1| 2483|Drosophila melanogaster pcx protein.
Length = 2483
Score = 29.1 bits (62), Expect = 6.1
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 367 PLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSG--LKLSKQT 513
P T+ A L V+K + + ELRRR+ + ADA ++G L KQT
Sbjct: 490 PCTSKMAAKSLGAIPKVVKYREVDELRRRRRGGSPADAAEAGNEFALVKQT 540
>AL009195-1|CAA15708.1| 3345|Drosophila melanogaster
EG:30B8.4,FBgn0003048;pcx protein.
Length = 3345
Score = 29.1 bits (62), Expect = 6.1
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 367 PLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSG--LKLSKQT 513
P T+ A L V+K + + ELRRR+ + ADA ++G L KQT
Sbjct: 943 PCTSKMAAKSLGAIPKVVKYREVDELRRRRRGGSPADAAEAGNEFALVKQT 993
>AE014298-365|AAF45756.2| 3433|Drosophila melanogaster CG3443-PB
protein.
Length = 3433
Score = 29.1 bits (62), Expect = 6.1
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 367 PLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSG--LKLSKQT 513
P T+ A L V+K + + ELRRR+ + ADA ++G L KQT
Sbjct: 954 PCTSKMAAKSLGAIPKVVKYREVDELRRRRRGGSPADAAEAGNEFALVKQT 1004
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,302,821
Number of Sequences: 53049
Number of extensions: 534881
Number of successful extensions: 1898
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1889
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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