Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30283
         (703 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   1.2  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   3.7  
AJ876408-1|CAI45289.1|   52|Apis mellifera putative diuretic hor...    23   3.7  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
 Frame = +2

Query: 149 HLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLP--NRRW 268
           H   +  WT ++     P  G +KT SK    F+LP    RW
Sbjct: 25  HRPAWWFWTATSHEASAPAEGKFKTVSKVPGPFSLPIFGTRW 66


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 259 PKMANTDLTRLLKSDEIRKVLRAPNKRV 342
           P   N  L  L+ S E+R+  +APN  V
Sbjct: 493 PYRLNKPLMSLITSSEVRQPGKAPNYSV 520


>AJ876408-1|CAI45289.1|   52|Apis mellifera putative diuretic
           hormone-I protein.
          Length = 52

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 415 VLKRKAILELRRRKNLKALADAE 483
           VL+++ +LEL RRK L+  A  +
Sbjct: 19  VLRQRVLLELARRKALQDQAQID 41


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,635
Number of Sequences: 438
Number of extensions: 2690
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)