Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30279
         (508 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   2.6  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   2.6  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    24   2.6  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   7.9  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 409  RREDDQRKQTVDQERGGSYAQRGAGSG 489
            R+   Q  ++ D E GGS    G+G+G
Sbjct: 1493 RQRKKQHTESSDDENGGSGGGSGSGAG 1519


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
 Frame = +2

Query: 158 SGNYTIEKETQDLPANIDIQTVNTHKFSTFGKAKVHKE---ATNPKPSQ--STRR-ANTS 319
           SGN++   E+       +I T NTH  S+     ++     +++  PS   S RR  NTS
Sbjct: 489 SGNWSASSESGRTSIGSEITTTNTHPKSSASSTSLNHSNPISSSAPPSSIVSRRRFFNTS 548

Query: 320 GHQGYVSSNT 349
                 S  T
Sbjct: 549 ASSSVTSEGT 558


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
 Frame = +2

Query: 158 SGNYTIEKETQDLPANIDIQTVNTHKFSTFGKAKVHKE---ATNPKPSQ--STRR-ANTS 319
           SGN++   E+       +I T NTH  S+     ++     +++  PS   S RR  NTS
Sbjct: 490 SGNWSASSESGRTSIGSEITTTNTHPKSSASSTSLNHSNPISSSAPPSSIVSRRRFFNTS 549

Query: 320 GHQGYVSSNT 349
                 S  T
Sbjct: 550 ASSSVTSEGT 559


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 14/59 (23%), Positives = 26/59 (44%)
 Frame = +2

Query: 203  NIDIQTVNTHKFSTFGKAKVHKEATNPKPSQSTRRANTSGHQGYVSSNTPLSSKIPVSQ 379
            ++D+ T+      +F   K H  + N   S S   ++ S +  + S  T   + +PV Q
Sbjct: 981  SVDL-TIGGSDDGSFAGDKTHSASPNRLESPSLNESSLSPNLWHGSIETSTDTLVPVDQ 1038


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 520,388
Number of Sequences: 2352
Number of extensions: 10352
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45668772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)