Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30278
         (709 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   7.4  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   9.8  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   9.8  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   9.8  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +2

Query: 95  VGNNLKSLEVSEEKAMA 145
           +G N K +E+++EK +A
Sbjct: 255 IGKNTKQVELTDEKIVA 271


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 56  DCKIVELEEELRVVGNNLKSLEVSEEK 136
           DC I  L+EE  +    LK +   +EK
Sbjct: 65  DCNIQVLDEENDINQGGLKRVSALKEK 91


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 106 PEISGSLRGEGDGVSRA 156
           PE++GS  G+G   S A
Sbjct: 42  PELTGSTNGDGGARSNA 58


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 106 PEISGSLRGEGDGVSRA 156
           PE++GS  G+G   S A
Sbjct: 198 PELTGSTNGDGGARSNA 214


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,351
Number of Sequences: 336
Number of extensions: 3102
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)