Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30278
(709 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265... 33 0.17
07_01_0020 - 127855-129156,129240-129365,129811-129865,130047-13... 32 0.39
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 32 0.39
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 31 0.68
05_05_0029 + 21694448-21694567,21694666-21695117,21695214-216955... 31 0.90
01_06_0847 + 32411521-32411619,32411737-32411851,32412292-324123... 30 1.6
11_01_0021 - 143576-143932,144434-144667,144988-145066,145138-14... 30 2.1
10_08_0961 + 21869612-21869773,21869869-21869956,21870047-218702... 30 2.1
09_01_0041 + 746494-746691,747301-747495,750509-750631,751457-75... 30 2.1
07_01_1113 - 10292781-10293299 30 2.1
03_01_0372 + 2895807-2895883,2896557-2896647,2896741-2896839,289... 30 2.1
12_02_0953 - 24736642-24736673,24737104-24737188,24737267-247373... 29 2.7
06_03_1347 - 29492460-29494685 29 2.7
11_04_0097 + 13448740-13450725 29 4.8
09_04_0613 + 18953761-18953932,18954672-18954799,18954885-189549... 29 4.8
04_04_1421 - 33449539-33449994 29 4.8
02_03_0223 + 16570264-16570357,16570470-16570552,16570974-165710... 29 4.8
02_02_0059 - 6432945-6433115,6433975-6434061,6434585-6434787,643... 29 4.8
11_04_0471 - 18121023-18121213,18121954-18122080,18122221-181222... 28 6.3
09_04_0629 - 19098087-19098516,19099120-19099370 28 6.3
09_01_0102 + 1582793-1582898,1582988-1583093,1584115-1584172,158... 28 6.3
07_03_0477 + 18552568-18553203 28 6.3
06_01_0804 + 6038640-6040262 28 6.3
02_05_0607 - 30315982-30316215,30316688-30316831,30316902-303169... 28 6.3
01_07_0046 - 40714701-40714763,40715266-40715343,40716398-407164... 28 6.3
01_06_0453 + 29501600-29502403 28 6.3
12_02_0871 + 23865343-23866016,23866122-23866170,23866276-238663... 28 8.4
11_06_0610 - 25449085-25453284 28 8.4
10_08_0838 - 20927020-20927207,20927288-20927491,20927654-209282... 28 8.4
03_06_0129 - 31883732-31883854,31883989-31884051,31884213-318842... 28 8.4
03_02_0416 - 8276433-8276503,8276794-8276945,8277696-8277775,827... 28 8.4
02_04_0102 + 19743276-19743420,19743500-19743966 28 8.4
01_06_0922 - 33022709-33023545 28 8.4
>02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,
2657523-2657649,2657731-2657812,2658172-2658196
Length = 2621
Score = 33.5 bits (73), Expect = 0.17
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +2
Query: 17 QDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDK---IHSLSQ 187
Q L+ E E + K +LE+ L+ LKSLEVS KA+ DK +HSLS+
Sbjct: 2321 QALDEEERELEVLENKSNDLEKMLQEKEFALKSLEVSRTKALTKLATTVDKFDELHSLSE 2380
Query: 188 KL 193
L
Sbjct: 2381 SL 2382
>07_01_0020 -
127855-129156,129240-129365,129811-129865,130047-130177
Length = 537
Score = 32.3 bits (70), Expect = 0.39
Identities = 19/47 (40%), Positives = 32/47 (68%)
Frame = +2
Query: 35 EERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIH 175
E E++ +IVE+EEE R++ L+ +V+EEKA A+RE ++ + H
Sbjct: 150 ENALEKARAEIVEMEEEKRLMSRKLR--KVAEEKA-AAREELKLERH 193
>04_04_1144 + 31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 32.3 bits (70), Expect = 0.39
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
L + E +E E +L EEL + N L L+V+ A+A +E ++IHSL
Sbjct: 1426 LAVTENKVELFHTEKENLVIANSKLNEELELHQNKLNELQVALAAAVAEKEGSSEEIHSL 1485
Query: 182 SQKL 193
+ L
Sbjct: 1486 RKTL 1489
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQK 190
+EQ+L+ A E S ++ EL EL SLE S +A + +K+ ++++
Sbjct: 837 LEQELKDATEECNSSRLRVDELSGELEEYKEKRTSLEASLLEAKQKEAELSEKLDQVNEE 896
>02_05_0484 -
29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 31.5 bits (68), Expect = 0.68
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLE---VSEEKAMASRE 154
+ + ++ EE EQ D K LEEE + + N K+LE +EEK + RE
Sbjct: 501 LRKQRQKFEEEWEQLDEKRTHLEEEAKKLNNEKKNLERWHDNEEKRLKDRE 551
>05_05_0029 +
21694448-21694567,21694666-21695117,21695214-21695529,
21695863-21697122
Length = 715
Score = 31.1 bits (67), Expect = 0.90
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 5 VLMEQDLERA-EERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASRE 154
+L E+ + RA +ERA+Q ++ ELEE+LR V + E + + +A E
Sbjct: 20 LLSERSVSRAAKERADQLTKRVAELEEQLRAVTAQRRKAERAAGEVLAILE 70
>01_06_0847 +
32411521-32411619,32411737-32411851,32412292-32412375,
32412430-32413478,32414690-32416371,32416477-32416586,
32417634-32418430,32418839-32418951,32419147-32419194,
32419425-32419652,32419732-32419829,32419967-32420019
Length = 1491
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +2
Query: 8 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQ 187
L+E + ++ E +++C +LEE+ ++ + +EV + A+ + H++ LSQ
Sbjct: 280 LIETERKKLTEEKSRAECLFAKLEEQKKLNEDLRVRIEVERKNAVDQKNHID----HLSQ 335
Query: 188 KL 193
KL
Sbjct: 336 KL 337
>11_01_0021 -
143576-143932,144434-144667,144988-145066,145138-145253,
145717-145861,146048-146465,147206-147869
Length = 670
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 92 HGAPPQAQRFCNRFVRRVPPPSLGPAP 12
H +PP R C R + PPP GP P
Sbjct: 51 HRSPPFTTRACFRRTKHPPPPPPGPPP 77
>10_08_0961 +
21869612-21869773,21869869-21869956,21870047-21870277,
21870371-21870538,21870808-21871001,21871151-21871234,
21871315-21871434,21871621-21871714,21871813-21871973,
21873237-21873313,21873738-21873932,21874487-21874559,
21874635-21874721,21874906-21875043,21875181-21875383,
21875469-21875631,21875861-21875992
Length = 789
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAM--ASREHVEDKIHSLS 184
+ ++ER E KI +LE E++ + LE+ E+A+ + ++ +D+IH ++
Sbjct: 334 LNAEIERYRGLVEVLQAKIEDLEHEIQKLMAEKNDLEIKAEEALQDSGKKDFKDEIHVMA 393
Query: 185 QKL 193
L
Sbjct: 394 ASL 396
>09_01_0041 +
746494-746691,747301-747495,750509-750631,751457-751636,
752772-753058,754343-754907
Length = 515
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Frame = +2
Query: 17 QDLERAEERAEQSDC--KIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQK 190
Q+ A E+A S+C KI E + E+ ++ +NLK +E+SE+ A ++ +++ ++ K
Sbjct: 140 QEENAAYEKAI-SNCRQKIQEKQMEVTLLRSNLKEMEISEQDLKAQLDNAQNEQYASQNK 198
>07_01_1113 - 10292781-10293299
Length = 172
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 191 ISARGCGSYPRRARETPSPSPLRLPEIS 108
+ A G+ PR AR T +P LRLPE++
Sbjct: 93 VDAATKGNPPRSARTTSAPGSLRLPEVA 120
>03_01_0372 +
2895807-2895883,2896557-2896647,2896741-2896839,
2897220-2897268,2897269-2897405,2898027-2898248,
2898335-2898488,2898574-2898723,2898890-2898978,
2899632-2899844,2900180-2900314,2900461-2900640,
2901004-2901111,2901215-2901340,2901421-2901550,
2901637-2901729,2902067-2902192,2902294-2902304
Length = 729
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +2
Query: 11 MEQDLERA-EERAEQSDC---KIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHS 178
+E+ L R EE A Q +I +L E +V LKS + ++ M R+ +ED+I
Sbjct: 539 LEKQLSRTTEEFASQISSLEERIADLISEKELVYEELKSTQEKMQQEMRHRQGLEDEILR 598
Query: 179 LSQKL 193
L Q L
Sbjct: 599 LKQSL 603
>12_02_0953 - 24736642-24736673,24737104-24737188,24737267-24737386,
24737484-24737549,24737629-24737799,24737901-24737999,
24738075-24738186,24738282-24738343,24738412-24738483,
24738583-24738681,24738764-24738997,24739104-24739178,
24739299-24739386,24739478-24739638,24739734-24739841,
24739934-24741922,24742007-24742279,24742957-24743295,
24743449-24745038,24745166-24745241,24745333-24745412,
24745614-24745679,24745761-24745830,24745899-24746134,
24746149-24746319,24746915-24747097,24747176-24747241,
24747326-24747389,24747472-24747530,24747612-24747699,
24747799-24747891,24747956-24748116,24748215-24748307,
24748405-24748518,24748654-24748773,24748852-24748935,
24749016-24749171,24749518-24750154,24752874-24752929
Length = 2815
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/80 (22%), Positives = 42/80 (52%)
Frame = +2
Query: 35 EERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQKLXXXXXXX 214
E + +S+ K+ LEE+L N LK + V +++ + H+E +++ +L
Sbjct: 2161 EAQILKSNQKVSALEEQLASKINELKEVSVEKDELTSKLNHIEGISYTMEDEL------- 2213
Query: 215 XXXXXSVQKLQKEAIGLKTI 274
++++L++E I L+++
Sbjct: 2214 ADKSKAIERLEEELIELRSL 2233
>06_03_1347 - 29492460-29494685
Length = 741
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = -3
Query: 164 PRRARETPSPSPLRLPEISGCYQRHGAPPQAQRFCNRFVRRVP 36
P +A PS P P G +GAP FCNR VR P
Sbjct: 226 PTQAATEPSDEPTGAPAAVG----NGAPNGGPSFCNRLVRANP 264
>11_04_0097 + 13448740-13450725
Length = 661
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -3
Query: 224 RRTRHVLQLEPISARGCGSYPRRARETPSPS 132
RR + L++EP SARG G P+RA P P+
Sbjct: 54 RRRKRRLRVEPPSARG-GPAPQRAPGAPRPA 83
>09_04_0613 +
18953761-18953932,18954672-18954799,18954885-18954956,
18955033-18955146,18955547-18955615,18955691-18955747,
18956262-18956315,18956387-18956449,18956543-18956605,
18956803-18956967,18957111-18957266,18957315-18957416
Length = 404
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/72 (19%), Positives = 34/72 (47%)
Frame = +2
Query: 32 AEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQKLXXXXXX 211
AEE+A +++ + +ELE+++ + ++++ + A + K+ L+ KL
Sbjct: 107 AEEQAGKANARAIELEKQIEKLKKDIEAQNSKKSTVEARAGDADKKVQELNAKLEKLQKT 166
Query: 212 XXXXXXSVQKLQ 247
+QK +
Sbjct: 167 SDEQKRRIQKTE 178
>04_04_1421 - 33449539-33449994
Length = 151
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 325 WPPSPPAGVCSFRARPPDRLQAY 257
+PP PPAG + A+PP AY
Sbjct: 69 YPPPPPAGAYGYPAQPPPAGYAY 91
>02_03_0223 +
16570264-16570357,16570470-16570552,16570974-16571032,
16571607-16571665,16572276-16572325,16573575-16573612,
16574619-16574695,16575593-16576503
Length = 456
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 6/59 (10%)
Frame = -3
Query: 176 CGSYPRRARETPS------PSPLRLPEISGCYQRHGAPPQAQRFCNRFVRRVPPPSLGP 18
C + PR+ R + P P R P GC P +R +RR PPP P
Sbjct: 205 CPTLPRKGRAASNTFSDCTPPPPRRPSRRGCLSWR--PTMTRRASGSSLRRAPPPPTSP 261
>02_02_0059 -
6432945-6433115,6433975-6434061,6434585-6434787,
6435281-6435392,6435473-6435517,6435622-6435726,
6435946-6435996,6436026-6436103,6437258-6437313,
6437784-6437853,6438288-6438392,6438525-6438637,
6439354-6439534,6439635-6440390
Length = 710
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = -3
Query: 143 PSPSPLRLPEISGCYQRHGAPPQAQRFCNRFVRRVPPPSLGPAP 12
P P P R PE Y HG P+A V PPP P P
Sbjct: 158 PLPPPARYPEARSRYDSHGWHPEAD------VPPPPPPLEPPVP 195
>11_04_0471 -
18121023-18121213,18121954-18122080,18122221-18122253,
18122969-18123009,18123415-18123484,18123626-18123744,
18123876-18123942,18124735-18124809,18125023-18125050,
18125130-18125179,18125679-18125741,18125829-18125870,
18126000-18126078,18127233-18127368,18128013-18128517,
18129238-18129372
Length = 586
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = +2
Query: 17 QDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHV 160
+ L AEER QS+ + ELE+++ +G+ L S+EV K M RE +
Sbjct: 298 EKLGLAEERFRQSEARTRELEKQVANLGDGL-SMEV---KLMKRREEM 341
>09_04_0629 - 19098087-19098516,19099120-19099370
Length = 226
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/50 (40%), Positives = 22/50 (44%)
Frame = +1
Query: 13 GAGPREGGGTRRTKRLQNR*A*GGAPCRW*QPEISGSLRGEGDGVSRARR 162
G R GG RR + R GG W E GS G GDG+ ARR
Sbjct: 97 GGDARPGGLQRRGTSAKKRGGGGGGAQGW---EAGGSA-GTGDGLEEARR 142
>09_01_0102 +
1582793-1582898,1582988-1583093,1584115-1584172,
1584676-1584745,1585132-1585197,1586374-1586429,
1587992-1588078,1588819-1589139,1589827-1589946,
1590747-1590881,1591529-1591605,1591681-1591756,
1592800-1592874,1592971-1593075,1593299-1593374,
1594482-1594617,1594702-1594804,1595186-1595298,
1596907-1597111,1597173-1597301,1597403-1597517,
1597710-1597795,1599108-1599203,1599615-1599751,
1600374-1600476,1601809-1601888,1602013-1602091,
1602241-1602298,1602489-1602586,1602673-1602767,
1602861-1602918
Length = 1074
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKI 172
L+ +++ + +E+ + IV+L+EEL N +SL + +E +ED I
Sbjct: 272 LLKLKERIPACQEKIDGHAAMIVKLKEELTDKERNARSLVEKSREVTMMKEKLEDDI 328
>07_03_0477 + 18552568-18553203
Length = 211
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 4 CSYGAGPR-EGGGTRRTKRLQNR*A*GGAPCRW*QPEISGSLRGEGDGVSRARRG 165
CS GA EGGG + R + R A G RW E + +G+GV++ G
Sbjct: 109 CSMGAKKAVEGGGYCQRFRYKERTAAGVVAPRWMMVEYGVAQEHDGEGVAQEHGG 163
>06_01_0804 + 6038640-6040262
Length = 540
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +3
Query: 291 KEQTPAGGDGGHAPRHPEYVNTALPSLARSA 383
KE+ GG GG APR VN P RSA
Sbjct: 26 KERYGGGGGGGDAPRSSRAVNPVPPYGRRSA 56
>02_05_0607 -
30315982-30316215,30316688-30316831,30316902-30316989,
30317829-30317934,30318398-30318552,30318630-30318699,
30319940-30320106,30320827-30320894,30322764-30322867,
30322937-30323107,30323113-30323238,30323496-30323663,
30323725-30323908,30324139-30324534
Length = 726
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -3
Query: 194 PISARGCGSYPRRARETPSPSPLRLP 117
P SA S+P AR PSPLR+P
Sbjct: 33 PHSASASASFPSTARRILLPSPLRVP 58
>01_07_0046 -
40714701-40714763,40715266-40715343,40716398-40716462,
40717075-40717201,40717279-40717319,40717621-40717690,
40718070-40718191,40719047-40719107,40719182-40719292,
40719387-40719461,40719815-40719842,40719929-40719978,
40720228-40720290,40720385-40720426,40720562-40720631,
40720663-40720713,40721857-40722041,40722374-40722775
Length = 567
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +2
Query: 17 QDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEV----SEEKAMASRE 154
+ L AEER E+++ + ELE+++ +G + SLE +E A+ RE
Sbjct: 249 EKLRLAEERCEEAEARAKELEKQVAALGEGV-SLEARLLSRKEAALKQRE 297
>01_06_0453 + 29501600-29502403
Length = 267
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/61 (29%), Positives = 24/61 (39%)
Frame = -3
Query: 194 PISARGCGSYPRRARETPSPSPLRLPEISGCYQRHGAPPQAQRFCNRFVRRVPPPSLGPA 15
P+ RG A + ++ S + AP QAQR + R PPP PA
Sbjct: 146 PVEKRGKAENAAAAGAARAKVAVKKSSSSEVRKLERAPAQAQRQVLQVQRAQPPPPRAPA 205
Query: 14 P 12
P
Sbjct: 206 P 206
>12_02_0871 +
23865343-23866016,23866122-23866170,23866276-23866356,
23866599-23866718,23866957-23867055,23867135-23867194,
23867316-23867410,23867483-23867508,23869212-23869285,
23870194-23870259,23871027-23871099,23871585-23871622,
23873758-23873871,23876079-23876195,23876288-23876368,
23876468-23876536,23876631-23876669,23876809-23876973,
23877380-23877484,23877569-23877637,23877754-23877816,
23877903-23878021,23878124-23878348,23878409-23878610
Length = 940
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 217 VRRAFRAETAKGGDRLEDDLVAEREKSKLLQEE 315
++R F T + G E+ LV +R K+KLL+EE
Sbjct: 259 IQRPFNLRTERRGKMKEESLV-QRMKNKLLEEE 290
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 416 RKYFSTILWKKLCRLIVYLEFYFSYEFF 499
R F+ I+ + +C L V + F F+Y FF
Sbjct: 334 RNVFTGIVHESICELPVLVNFSFAYNFF 361
>10_08_0838 -
20927020-20927207,20927288-20927491,20927654-20928297,
20928549-20928788,20928884-20928978,20929087-20929434,
20929824-20930042,20930422-20930487,20931191-20931362,
20931456-20931703,20931933-20932073,20932238-20932330,
20932421-20932471,20933571-20933693,20933793-20934035,
20934131-20934211,20935245-20935340,20935535-20936320,
20936443-20937012,20937322-20937427,20938102-20938206,
20938311-20938432,20939321-20939413,20940081-20940104
Length = 1685
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
+ Q E R +SD LEE ++V + ++SL++ K R+ + S+
Sbjct: 210 LNQQKHLLEHRISESDSVATYLEESMKVTESRVQSLKLEYSKMKRERDDAVKEARSM 266
>03_06_0129 -
31883732-31883854,31883989-31884051,31884213-31884272,
31884724-31884784,31884934-31885004,31885313-31885389,
31885856-31885913,31885995-31886048,31886279-31886297,
31886359-31886466,31886574-31886690,31886836-31886919,
31887079-31887171,31887279-31887499,31888294-31888371,
31889237-31889499,31890109-31890247
Length = 562
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 65 IVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQKL 193
I ELE+E++++ + KS R+ +EDKIH L L
Sbjct: 419 IPELEQEVKLLSES-KSTRKELRHLRMERDSIEDKIHRLEWSL 460
>03_02_0416 -
8276433-8276503,8276794-8276945,8277696-8277775,
8277913-8277986,8280046-8280250
Length = 193
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 128 LRLPEISGCYQRHGAPPQAQRFCNR 54
+RLP+ S CY HG P +R C+R
Sbjct: 55 IRLPD-SVCYGLHGTPISCERECSR 78
>02_04_0102 + 19743276-19743420,19743500-19743966
Length = 203
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 86 APPQAQRFCNRFVRRVPPPSLGP 18
APP+A+R R R PPP GP
Sbjct: 164 APPRARRATPRAGRATPPPYAGP 186
>01_06_0922 - 33022709-33023545
Length = 278
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Frame = -3
Query: 161 RRARETPSPSPLRLPE----ISGCYQRHGAPPQAQRFCNRFVRRVPPPSLGPAP 12
R R +PSP+ R PE S PP R R V+ PP L P P
Sbjct: 177 RSVRRSPSPAAKRTPEQRRAASPAPSLQRKPPVPVRPSPRRVQEAPPSPLEPPP 230
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,864,095
Number of Sequences: 37544
Number of extensions: 403227
Number of successful extensions: 1574
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1569
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -