Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30278
         (709 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    30   0.082
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    27   0.58 
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              24   4.1  
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    23   7.1  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   7.1  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   9.4  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 29.9 bits (64), Expect = 0.082
 Identities = 14/60 (23%), Positives = 33/60 (55%)
 Frame = +2

Query: 11   MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQK 190
            ME ++E A+    + + +  +LEEE   +   L+ ++++ EKA      ++ +I +L ++
Sbjct: 940  MEDEVEAAQSAIRKGNDERTQLEEEANKLREELEEMKLAIEKAHEGSSSIKKEIVALQKR 999


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 27.1 bits (57), Expect = 0.58
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 137 PSPLRLPEISGCYQRHGAPPQAQR 66
           P PL + E + C+QR+ A P+A R
Sbjct: 842 PHPLLIKEDARCHQRYLADPEASR 865


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -1

Query: 253 LLLQFLHGTLGELGTCFSLSQFLREAVDLILDVLARRHRL 134
           L+LQ +   +GE GTC  +++     V+ I D LA+   L
Sbjct: 445 LILQQIRTIIGEAGTCRHVTEMAALVVNDI-DPLAKEEEL 483


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 536 IVESSGASRCYYF*SNCQPLFFYVT 610
           +   +G S CY F   C  LFF +T
Sbjct: 220 LARDTGFSTCYTFTFICLYLFFIIT 244


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 259 RLEDDLVAEREKSKLLQE 312
           R +DDL  E  KSKLL E
Sbjct: 162 RSDDDLTMELVKSKLLDE 179


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 149  ETPSPSPLRLPEI 111
            ETPSP PL + E+
Sbjct: 2340 ETPSPDPLNIAEL 2352


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,294
Number of Sequences: 2352
Number of extensions: 13228
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)