Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30278
(709 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M19714-1|AAA61226.1| 264|Homo sapiens TPM1 protein. 76 1e-13
M19713-1|AAA61225.1| 284|Homo sapiens TPM1 protein. 76 1e-13
BC053545-1|AAH53545.1| 245|Homo sapiens tropomyosin 1 (alpha) p... 76 1e-13
BC050473-1|AAH50473.1| 287|Homo sapiens TPM1 protein protein. 76 1e-13
AK131384-1|BAD18535.1| 326|Homo sapiens protein ( Homo sapiens ... 76 1e-13
AB209041-1|BAD92278.1| 303|Homo sapiens TPM1 protein variant pr... 76 1e-13
AY640415-1|AAT68295.1| 284|Homo sapiens tropomyosin alpha stria... 74 6e-13
AY640414-1|AAT68294.1| 284|Homo sapiens sarcomeric tropomyosin ... 74 6e-13
M12127-1|AAA36774.1| 131|Homo sapiens protein ( Human cytoskele... 73 1e-12
X05276-1|CAA28888.1| 248|Homo sapiens protein ( Human mRNA for ... 70 7e-12
BT019634-1|AAV38440.1| 248|Homo sapiens tropomyosin 4 protein. 70 7e-12
BC067225-1|AAH67225.1| 248|Homo sapiens tropomyosin 4 protein. 70 7e-12
BC037576-1|AAH37576.1| 248|Homo sapiens tropomyosin 4 protein. 70 7e-12
BC002827-1|AAH02827.1| 248|Homo sapiens tropomyosin 4 protein. 70 7e-12
AK023385-1|BAB14554.1| 284|Homo sapiens protein ( Homo sapiens ... 70 7e-12
AF310722-1|AAK17926.1| 320|Homo sapiens tropomyosin 4-anaplasti... 70 7e-12
AF186110-1|AAG17015.1| 227|Homo sapiens TPM4-ALK fusion oncopro... 70 7e-12
AF186109-1|AAG17014.1| 237|Homo sapiens TPM4-ALK fusion oncopro... 70 7e-12
X04201-1|CAA27798.1| 285|Homo sapiens protein ( Human skeletal ... 69 1e-11
BC062740-1|AAH62740.1| 158|Homo sapiens TPM3 protein protein. 69 1e-11
BC008425-1|AAH08425.1| 285|Homo sapiens tropomyosin 3 protein. 69 1e-11
BC008407-1|AAH08407.1| 285|Homo sapiens tropomyosin 3 protein. 69 1e-11
AL590431-12|CAH71269.1| 284|Homo sapiens tropomyosin 3 protein. 69 1e-11
AL590431-11|CAH71270.1| 242|Homo sapiens tropomyosin 3 protein. 69 1e-11
AL590431-10|CAH71268.1| 247|Homo sapiens tropomyosin 3 protein. 69 1e-11
AL590431-9|CAH71267.1| 248|Homo sapiens tropomyosin 3 protein. 69 1e-11
AL590431-4|CAH71262.1| 158|Homo sapiens tropomyosin 3 protein. 69 1e-11
AL590431-3|CAH71261.1| 158|Homo sapiens tropomyosin 3 protein. 69 1e-11
AL133410-1|CAI10975.1| 284|Homo sapiens tropomyosin 2 (beta) pr... 69 1e-11
AK092690-1|BAC03946.1| 243|Homo sapiens protein ( Homo sapiens ... 69 1e-11
X06825-1|CAA29971.1| 284|Homo sapiens protein ( Human mRNA for ... 69 2e-11
M12126-1|AAA61229.1| 131|Homo sapiens TPM2 protein. 69 2e-11
AL133410-4|CAI10977.1| 284|Homo sapiens tropomyosin 2 (beta) pr... 69 2e-11
AL133410-3|CAI10976.1| 322|Homo sapiens tropomyosin 2 (beta) pr... 69 2e-11
X12369-1|CAA30930.1| 227|Homo sapiens tropomyosin (227 AA) prot... 67 7e-11
Z24727-1|CAA80853.1| 243|Homo sapiens tropomyosin isoform protein. 66 9e-11
M19715-1|AAA61227.1| 229|Homo sapiens TPM1 protein. 66 9e-11
M19267-1|AAA36771.1| 284|Homo sapiens protein ( Human tropomyos... 66 9e-11
BC007433-1|AAH07433.1| 284|Homo sapiens tropomyosin 1 (alpha) p... 66 9e-11
AF474156-1|AAL84569.1| 203|Homo sapiens TPMsk1 protein. 66 9e-11
AF362887-1|AAK51964.1| 142|Homo sapiens tropomyosin 4-anaplasti... 66 9e-11
DQ424903-1|ABD83668.1| 245|Homo sapiens tropomyosin 1 alpha var... 64 6e-10
M75165-1|AAB59509.1| 284|Homo sapiens tropomyosin protein. 62 1e-09
M74817-1|AAA61230.1| 284|Homo sapiens tropomyosin-1 protein. 62 1e-09
M12125-1|AAA36773.1| 284|Homo sapiens protein ( Human fibroblas... 62 1e-09
BC011776-1|AAH11776.1| 284|Homo sapiens tropomyosin 2 (beta) pr... 62 1e-09
AL133410-2|CAI10974.1| 284|Homo sapiens tropomyosin 2 (beta) pr... 62 1e-09
AK223258-1|BAD96978.1| 284|Homo sapiens tropomyosin 2 (beta) is... 62 1e-09
X04588-1|CAB37185.1| 248|Homo sapiens protein ( Human 2.5 kb mR... 62 2e-09
X03541-1|CAA27243.1| 641|Homo sapiens protein ( Human mRNA of t... 62 2e-09
M12128-1|AAA36775.1| 96|Homo sapiens protein ( Human cytoskele... 62 2e-09
BC072428-1|AAH72428.1| 248|Homo sapiens tropomyosin 3 protein. 62 2e-09
BC015403-1|AAH15403.1| 248|Homo sapiens tropomyosin 3 protein. 62 2e-09
BC000771-1|AAH00771.1| 248|Homo sapiens tropomyosin 3 protein. 62 2e-09
AY004867-1|AAF87083.1| 247|Homo sapiens tropomyosin isoform pro... 62 2e-09
AL590431-8|CAH71264.1| 248|Homo sapiens tropomyosin 3 protein. 62 2e-09
AL590431-7|CAH71266.1| 248|Homo sapiens tropomyosin 3 protein. 62 2e-09
AL590431-6|CAH71265.1| 232|Homo sapiens tropomyosin 3 protein. 62 2e-09
AL590431-5|CAH71263.1| 224|Homo sapiens tropomyosin 3 protein. 62 2e-09
AK092712-1|BAC03956.1| 183|Homo sapiens protein ( Homo sapiens ... 62 2e-09
AF474157-1|AAL84570.1| 247|Homo sapiens TPMsk3 protein. 62 2e-09
AF209746-1|AAF17621.1| 257|Homo sapiens beta tropomyosin protein. 62 2e-09
AK129882-1|BAC85248.1| 217|Homo sapiens protein ( Homo sapiens ... 58 2e-08
DQ120714-1|ABC40673.1| 247|Homo sapiens rcTPM3 protein. 56 9e-08
AL590431-2|CAH71260.1| 233|Homo sapiens tropomyosin 3 protein. 40 0.012
AF362886-1|AAK51963.1| 103|Homo sapiens tropomyosin 4-anaplasti... 39 0.015
AB062125-1|BAB93457.1| 92|Homo sapiens cytoskeletal tropomyosi... 38 0.047
Y10351-1|CAA71377.1| 711|Homo sapiens nuclear protein SDK3 prot... 33 0.76
Y09703-1|CAA70874.1| 586|Homo sapiens MEMA protein. 33 0.76
BC062602-1|AAH62602.1| 717|Homo sapiens pinin, desmosome associ... 33 0.76
BC061910-1|AAH61910.1| 92|Homo sapiens tropomyosin 3 pseudogen... 33 0.76
AK223612-1|BAD97332.1| 717|Homo sapiens pinin, desmosome associ... 33 0.76
AF195139-1|AAG33941.1| 717|Homo sapiens pinin protein. 33 0.76
AF112222-1|AAF17209.1| 717|Homo sapiens nuclear protein SDK3 pr... 33 0.76
AB046860-1|BAB13466.1| 940|Homo sapiens KIAA1640 protein protein. 33 1.3
U77718-1|AAB48304.1| 743|Homo sapiens pinin protein. 32 2.3
Z94057-1|CAI21650.1| 1358|Homo sapiens tenascin R (restrictin, j... 31 3.1
Z94055-1|CAI19943.1| 1358|Homo sapiens tenascin R (restrictin, j... 31 3.1
Z67996-1|CAA91947.1| 1358|Homo sapiens tenascin-R (restrictin) p... 31 3.1
X98085-1|CAA66709.1| 1358|Homo sapiens tenascin-R protein. 31 3.1
BC129830-1|AAI29831.1| 1257|Homo sapiens TNR protein protein. 31 3.1
BC026213-1|AAH26213.1| 529|Homo sapiens F-box and WD repeat dom... 31 3.1
AY681966-1|AAV87216.1| 2069|Homo sapiens citron protein. 31 3.1
AB033280-1|BAA92330.1| 529|Homo sapiens F-box and WD-repeats pr... 31 3.1
BX640896-1|CAE45944.1| 1359|Homo sapiens hypothetical protein pr... 31 4.0
BX537759-1|CAD97828.1| 1763|Homo sapiens hypothetical protein pr... 31 4.0
BX537708-1|CAD97819.1| 1605|Homo sapiens hypothetical protein pr... 31 4.0
BX537421-1|CAD97663.1| 1204|Homo sapiens hypothetical protein pr... 31 4.0
BC146782-1|AAI46783.1| 1814|Homo sapiens CDK5 regulatory subunit... 31 4.0
BC026171-1|AAH26171.1| 778|Homo sapiens FAM47A protein protein. 31 4.0
AL591625-1|CAI41438.1| 791|Homo sapiens family with sequence si... 31 4.0
AL590642-2|CAH70770.1| 862|Homo sapiens CDK5 regulatory subunit... 31 4.0
AL590642-1|CAH70769.1| 1893|Homo sapiens CDK5 regulatory subunit... 31 4.0
AL391870-2|CAI40926.1| 862|Homo sapiens CDK5 regulatory subunit... 31 4.0
AL391870-1|CAI40925.1| 1893|Homo sapiens CDK5 regulatory subunit... 31 4.0
AL353736-2|CAI40654.1| 862|Homo sapiens CDK5 regulatory subunit... 31 4.0
AL353736-1|CAI40653.1| 1893|Homo sapiens CDK5 regulatory subunit... 31 4.0
AL138836-2|CAI16964.1| 862|Homo sapiens CDK5 regulatory subunit... 31 4.0
AL138836-1|CAI16963.1| 1893|Homo sapiens CDK5 regulatory subunit... 31 4.0
AF448860-1|AAP41926.1| 1893|Homo sapiens hypothetical protein pr... 31 4.0
AB046853-1|BAB13459.2| 1852|Homo sapiens KIAA1633 protein protein. 31 4.0
AB023217-1|BAA76844.2| 1956|Homo sapiens KIAA1000 protein protein. 31 4.0
Z15005-1|CAA78727.1| 2663|Homo sapiens CENP-E protein. 30 7.1
D29642-1|BAA06125.2| 666|Homo sapiens KIAA0053 protein. 30 7.1
BC051911-1|AAH51911.1| 757|Homo sapiens chromosome 13 open read... 30 7.1
BC041806-1|AAH41806.1| 698|Homo sapiens C13orf24 protein protein. 30 7.1
BC006009-1|AAH06009.1| 414|Homo sapiens Unknown (protein for IM... 30 7.1
AL391384-3|CAI15673.1| 757|Homo sapiens RP11-505F3.1 protein. 30 7.1
AL354720-1|CAI14869.1| 757|Homo sapiens RP11-505F3.1 protein. 30 7.1
AF330046-1|AAL37481.1| 757|Homo sapiens progesterone-induced bl... 30 7.1
AF036943-1|AAF14051.1| 1192|Homo sapiens myelin transcription fa... 30 7.1
AC097495-2|AAY15074.1| 558|Homo sapiens unknown protein. 30 7.1
AB209996-1|BAE06078.1| 2585|Homo sapiens CENPE variant protein p... 30 7.1
X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein. 30 9.3
D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 prot... 30 9.3
BC150281-1|AAI50282.1| 1132|Homo sapiens MYT1L protein protein. 30 9.3
BC035251-1|AAH35251.1| 1031|Homo sapiens coiled-coil domain cont... 30 9.3
AB029029-1|BAA83058.2| 1154|Homo sapiens KIAA1106 protein protein. 30 9.3
>M19714-1|AAA61226.1| 264|Homo sapiens TPM1 protein.
Length = 264
Score = 75.8 bits (178), Expect = 1e-13
Identities = 42/83 (50%), Positives = 50/83 (60%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLERAEERAE S+ K ELEEEL+ V NNLKSLE EK + E++I L
Sbjct: 149 LVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDRYEEEIKVL 208
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
S KL SV KL+K
Sbjct: 209 SDKLKEAETRAEFAERSVTKLEK 231
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 247 KGGDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 348
K D LED+L A++ K K + EE++ L+D+ +M
Sbjct: 231 KSIDDLEDELYAQKLKYKAISEELDHALNDMTSM 264
>M19713-1|AAA61225.1| 284|Homo sapiens TPM1 protein.
Length = 284
Score = 75.8 bits (178), Expect = 1e-13
Identities = 42/83 (50%), Positives = 50/83 (60%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLERAEERAE S+ K ELEEEL+ V NNLKSLE EK + E++I L
Sbjct: 169 LVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDRYEEEIKVL 228
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
S KL SV KL+K
Sbjct: 229 SDKLKEAETRAEFAERSVTKLEK 251
Score = 29.9 bits (64), Expect = 9.3
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 247 KGGDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 348
K D LED+L A++ K K + EE++ L+D+ ++
Sbjct: 251 KSIDDLEDELYAQKLKYKAISEELDHALNDMTSI 284
>BC053545-1|AAH53545.1| 245|Homo sapiens tropomyosin 1 (alpha)
protein.
Length = 245
Score = 75.8 bits (178), Expect = 1e-13
Identities = 42/83 (50%), Positives = 50/83 (60%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLERAEERAE S+ K ELEEEL+ V NNLKSLE EK + E++I L
Sbjct: 133 LVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDRYEEEIKVL 192
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
S KL SV KL+K
Sbjct: 193 SDKLKEAETRAEFAERSVTKLEK 215
>BC050473-1|AAH50473.1| 287|Homo sapiens TPM1 protein protein.
Length = 287
Score = 75.8 bits (178), Expect = 1e-13
Identities = 42/83 (50%), Positives = 50/83 (60%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLERAEERAE S+ K ELEEEL+ V NNLKSLE EK + E++I L
Sbjct: 175 LVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDRYEEEIKVL 234
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
S KL SV KL+K
Sbjct: 235 SDKLKEAETRAEFAERSVTKLEK 257
>AK131384-1|BAD18535.1| 326|Homo sapiens protein ( Homo sapiens
cDNA FLJ16459 fis, clone BRCAN2002473, moderately
similar to Tropomyosin, fibroblast isoform 2. ).
Length = 326
Score = 75.8 bits (178), Expect = 1e-13
Identities = 42/83 (50%), Positives = 50/83 (60%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLERAEERAE S+ K ELEEEL+ V NNLKSLE EK + E++I L
Sbjct: 211 LVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDRYEEEIKVL 270
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
S KL SV KL+K
Sbjct: 271 SDKLKEAETRAEFAERSVTKLEK 293
>AB209041-1|BAD92278.1| 303|Homo sapiens TPM1 protein variant
protein.
Length = 303
Score = 75.8 bits (178), Expect = 1e-13
Identities = 42/83 (50%), Positives = 50/83 (60%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLERAEERAE S+ K ELEEEL+ V NNLKSLE EK + E++I L
Sbjct: 191 LVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDRYEEEIKVL 250
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
S KL SV KL+K
Sbjct: 251 SDKLKEAETRAEFAERSVTKLEK 273
>AY640415-1|AAT68295.1| 284|Homo sapiens tropomyosin alpha striated
muscle isoform protein.
Length = 284
Score = 73.7 bits (173), Expect = 6e-13
Identities = 41/83 (49%), Positives = 50/83 (60%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLERAEERAE S+ K ELEEEL+ V N+LKSLE EK + E++I L
Sbjct: 169 LVIIESDLERAEERAELSEGKCAELEEELKTVTNDLKSLEAQAEKYSQKEDRYEEEIKVL 228
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
S KL SV KL+K
Sbjct: 229 SDKLKEAETRAEFAERSVTKLEK 251
Score = 29.9 bits (64), Expect = 9.3
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 247 KGGDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 348
K D LED+L A++ K K + EE++ L+D+ ++
Sbjct: 251 KSIDDLEDELYAQKLKYKAISEELDHALNDMTSI 284
>AY640414-1|AAT68294.1| 284|Homo sapiens sarcomeric tropomyosin
kappa protein.
Length = 284
Score = 73.7 bits (173), Expect = 6e-13
Identities = 41/83 (49%), Positives = 50/83 (60%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLERAEERAE S+ K ELEEEL+ V N+LKSLE EK + E++I L
Sbjct: 169 LVIIESDLERAEERAELSEGKCAELEEELKTVTNDLKSLEAQAEKYSQKEDRYEEEIKVL 228
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
S KL SV KL+K
Sbjct: 229 SDKLKEAETRAEFAERSVTKLEK 251
Score = 29.9 bits (64), Expect = 9.3
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 247 KGGDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 348
K D LED+L A++ K K + EE++ L+D+ ++
Sbjct: 251 KSIDDLEDELYAQKLKYKAISEELDHALNDMTSI 284
>M12127-1|AAA36774.1| 131|Homo sapiens protein ( Human cytoskeletal
tropomyosin isoform (3.0 kb) mRNA, 3' end. ).
Length = 131
Score = 72.5 bits (170), Expect = 1e-12
Identities = 40/83 (48%), Positives = 51/83 (61%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E +LERAEERAE S+ K +LEEELR V NNLKSLE + EK + E++I L
Sbjct: 16 LVILEGELERAEERAEVSESKCGDLEEELRTVTNNLKSLEAASEKYSEKEDKYEEEIKLL 75
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
S KL +V KL+K
Sbjct: 76 SDKLKEAETRAEFAERTVAKLEK 98
>X05276-1|CAA28888.1| 248|Homo sapiens protein ( Human mRNA for
fibroblast tropomyosin TM30 (pl). ).
Length = 248
Score = 70.1 bits (164), Expect = 7e-12
Identities = 39/83 (46%), Positives = 51/83 (61%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E +LERAEERAE S+ K +LEEEL+ V NNLKSLE + EK + E++I L
Sbjct: 133 LVILEGELERAEERAEVSELKCGDLEEELKNVTNNLKSLEAASEKYSEKEDKYEEEIKLL 192
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
S KL +V KL+K
Sbjct: 193 SDKLKEAETRAEFAERTVAKLEK 215
>BT019634-1|AAV38440.1| 248|Homo sapiens tropomyosin 4 protein.
Length = 248
Score = 70.1 bits (164), Expect = 7e-12
Identities = 39/83 (46%), Positives = 51/83 (61%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E +LERAEERAE S+ K +LEEEL+ V NNLKSLE + EK + E++I L
Sbjct: 133 LVILEGELERAEERAEVSELKCGDLEEELKNVTNNLKSLEAASEKYSEKEDKYEEEIKLL 192
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
S KL +V KL+K
Sbjct: 193 SDKLKEAETRAEFAERTVAKLEK 215
>BC067225-1|AAH67225.1| 248|Homo sapiens tropomyosin 4 protein.
Length = 248
Score = 70.1 bits (164), Expect = 7e-12
Identities = 39/83 (46%), Positives = 51/83 (61%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E +LERAEERAE S+ K +LEEEL+ V NNLKSLE + EK + E++I L
Sbjct: 133 LVILEGELERAEERAEVSELKCGDLEEELKNVTNNLKSLEAASEKYSEKEDKYEEEIKLL 192
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
S KL +V KL+K
Sbjct: 193 SDKLKEAETRAEFAERTVAKLEK 215
>BC037576-1|AAH37576.1| 248|Homo sapiens tropomyosin 4 protein.
Length = 248
Score = 70.1 bits (164), Expect = 7e-12
Identities = 39/83 (46%), Positives = 51/83 (61%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E +LERAEERAE S+ K +LEEEL+ V NNLKSLE + EK + E++I L
Sbjct: 133 LVILEGELERAEERAEVSELKCGDLEEELKNVTNNLKSLEAASEKYSEKEDKYEEEIKLL 192
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
S KL +V KL+K
Sbjct: 193 SDKLKEAETRAEFAERTVAKLEK 215
>BC002827-1|AAH02827.1| 248|Homo sapiens tropomyosin 4 protein.
Length = 248
Score = 70.1 bits (164), Expect = 7e-12
Identities = 39/83 (46%), Positives = 51/83 (61%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E +LERAEERAE S+ K +LEEEL+ V NNLKSLE + EK + E++I L
Sbjct: 133 LVILEGELERAEERAEVSELKCGDLEEELKNVTNNLKSLEAASEKYSEKEDKYEEEIKLL 192
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
S KL +V KL+K
Sbjct: 193 SDKLKEAETRAEFAERTVAKLEK 215
>AK023385-1|BAB14554.1| 284|Homo sapiens protein ( Homo sapiens
cDNA FLJ13323 fis, clone OVARC1001731, highly similar to
TROPOMYOSIN ALPHA CHAIN, FIBROBLAST ISOFORM F2. ).
Length = 284
Score = 70.1 bits (164), Expect = 7e-12
Identities = 39/83 (46%), Positives = 51/83 (61%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E +LERAEERAE S+ K +LEEEL+ V NNLKSLE + EK + E++I L
Sbjct: 169 LVILEGELERAEERAEVSELKCGDLEEELKNVTNNLKSLEAASEKYSEKEDKYEEEIKLL 228
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
S KL +V KL+K
Sbjct: 229 SDKLKEAETRAEFAERTVAKLEK 251
>AF310722-1|AAK17926.1| 320|Homo sapiens tropomyosin 4-anaplastic
lymphoma kinase fusion protein protein.
Length = 320
Score = 70.1 bits (164), Expect = 7e-12
Identities = 39/83 (46%), Positives = 51/83 (61%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E +LERAEERAE S+ K +LEEEL+ V NNLKSLE + EK + E++I L
Sbjct: 133 LVILEGELERAEERAEVSELKCGDLEEELKNVTNNLKSLEAASEKYSEKEDKYEEEIKLL 192
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
S KL +V KL+K
Sbjct: 193 SDKLKEAETRAEFAERTVAKLEK 215
>AF186110-1|AAG17015.1| 227|Homo sapiens TPM4-ALK fusion
oncoprotein type 1 protein.
Length = 227
Score = 70.1 bits (164), Expect = 7e-12
Identities = 39/83 (46%), Positives = 51/83 (61%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E +LERAEERAE S+ K +LEEEL+ V NNLKSLE + EK + E++I L
Sbjct: 43 LVILEGELERAEERAEVSELKCGDLEEELKNVTNNLKSLEAASEKYSEKEDKYEEEIKLL 102
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
S KL +V KL+K
Sbjct: 103 SDKLKEAETRAEFAERTVAKLEK 125
>AF186109-1|AAG17014.1| 237|Homo sapiens TPM4-ALK fusion
oncoprotein type 2 protein.
Length = 237
Score = 70.1 bits (164), Expect = 7e-12
Identities = 39/83 (46%), Positives = 51/83 (61%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E +LERAEERAE S+ K +LEEEL+ V NNLKSLE + EK + E++I L
Sbjct: 133 LVILEGELERAEERAEVSELKCGDLEEELKNVTNNLKSLEAASEKYSEKEDKYEEEIKLL 192
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
S KL +V KL+K
Sbjct: 193 SDKLKEAETRAEFAERTVAKLEK 215
>X04201-1|CAA27798.1| 285|Homo sapiens protein ( Human skeletal
muscle 1.3 kb mRNA for tropomyosin. ).
Length = 285
Score = 69.3 bits (162), Expect = 1e-11
Identities = 39/83 (46%), Positives = 49/83 (59%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLER EERAE ++ K ELEEEL+ V NNLKSLE EK + E++I L
Sbjct: 170 LVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKIL 229
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+ KL SV KL+K
Sbjct: 230 TDKLKEAETRAEFAERSVAKLEK 252
Score = 30.3 bits (65), Expect = 7.1
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 235 AETAKGGDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 348
A+ K D LED+L A++ K K + EE++ L+D+ ++
Sbjct: 248 AKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI 285
>BC062740-1|AAH62740.1| 158|Homo sapiens TPM3 protein protein.
Length = 158
Score = 69.3 bits (162), Expect = 1e-11
Identities = 39/83 (46%), Positives = 49/83 (59%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLER EERAE ++ K ELEEEL+ V NNLKSLE EK + E++I L
Sbjct: 43 LVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKIL 102
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+ KL SV KL+K
Sbjct: 103 TDKLKEAETRAEFAERSVAKLEK 125
Score = 30.3 bits (65), Expect = 7.1
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 235 AETAKGGDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 348
A+ K D LED+L A++ K K + EE++ L+D+ ++
Sbjct: 121 AKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI 158
>BC008425-1|AAH08425.1| 285|Homo sapiens tropomyosin 3 protein.
Length = 285
Score = 69.3 bits (162), Expect = 1e-11
Identities = 39/83 (46%), Positives = 49/83 (59%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLER EERAE ++ K ELEEEL+ V NNLKSLE EK + E++I L
Sbjct: 170 LVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKIL 229
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+ KL SV KL+K
Sbjct: 230 TDKLKEAETRAEFAERSVAKLEK 252
Score = 30.3 bits (65), Expect = 7.1
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 235 AETAKGGDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 348
A+ K D LED+L A++ K K + EE++ L+D+ ++
Sbjct: 248 AKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI 285
>BC008407-1|AAH08407.1| 285|Homo sapiens tropomyosin 3 protein.
Length = 285
Score = 69.3 bits (162), Expect = 1e-11
Identities = 39/83 (46%), Positives = 49/83 (59%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLER EERAE ++ K ELEEEL+ V NNLKSLE EK + E++I L
Sbjct: 170 LVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKIL 229
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+ KL SV KL+K
Sbjct: 230 TDKLKEAETRAEFAERSVAKLEK 252
Score = 30.3 bits (65), Expect = 7.1
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 235 AETAKGGDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 348
A+ K D LED+L A++ K K + EE++ L+D+ ++
Sbjct: 248 AKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI 285
>AL590431-12|CAH71269.1| 284|Homo sapiens tropomyosin 3 protein.
Length = 284
Score = 69.3 bits (162), Expect = 1e-11
Identities = 39/83 (46%), Positives = 49/83 (59%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLER EERAE ++ K ELEEEL+ V NNLKSLE EK + E++I L
Sbjct: 169 LVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKIL 228
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+ KL SV KL+K
Sbjct: 229 TDKLKEAETRAEFAERSVAKLEK 251
Score = 30.3 bits (65), Expect = 7.1
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 235 AETAKGGDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 348
A+ K D LED+L A++ K K + EE++ L+D+ ++
Sbjct: 247 AKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI 284
>AL590431-11|CAH71270.1| 242|Homo sapiens tropomyosin 3 protein.
Length = 242
Score = 69.3 bits (162), Expect = 1e-11
Identities = 39/83 (46%), Positives = 49/83 (59%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLER EERAE ++ K ELEEEL+ V NNLKSLE EK + E++I L
Sbjct: 127 LVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKIL 186
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+ KL SV KL+K
Sbjct: 187 TDKLKEAETRAEFAERSVAKLEK 209
Score = 30.3 bits (65), Expect = 7.1
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 235 AETAKGGDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 348
A+ K D LED+L A++ K K + EE++ L+D+ ++
Sbjct: 205 AKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI 242
>AL590431-10|CAH71268.1| 247|Homo sapiens tropomyosin 3 protein.
Length = 247
Score = 69.3 bits (162), Expect = 1e-11
Identities = 39/83 (46%), Positives = 49/83 (59%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLER EERAE ++ K ELEEEL+ V NNLKSLE EK + E++I L
Sbjct: 133 LVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKIL 192
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+ KL SV KL+K
Sbjct: 193 TDKLKEAETRAEFAERSVAKLEK 215
>AL590431-9|CAH71267.1| 248|Homo sapiens tropomyosin 3 protein.
Length = 248
Score = 69.3 bits (162), Expect = 1e-11
Identities = 39/83 (46%), Positives = 49/83 (59%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLER EERAE ++ K ELEEEL+ V NNLKSLE EK + E++I L
Sbjct: 133 LVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKIL 192
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+ KL SV KL+K
Sbjct: 193 TDKLKEAETRAEFAERSVAKLEK 215
>AL590431-4|CAH71262.1| 158|Homo sapiens tropomyosin 3 protein.
Length = 158
Score = 69.3 bits (162), Expect = 1e-11
Identities = 39/83 (46%), Positives = 49/83 (59%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLER EERAE ++ K ELEEEL+ V NNLKSLE EK + E++I L
Sbjct: 43 LVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKIL 102
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+ KL SV KL+K
Sbjct: 103 TDKLKEAETRAEFAERSVAKLEK 125
Score = 30.3 bits (65), Expect = 7.1
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 235 AETAKGGDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 348
A+ K D LED+L A++ K K + EE++ L+D+ ++
Sbjct: 121 AKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI 158
>AL590431-3|CAH71261.1| 158|Homo sapiens tropomyosin 3 protein.
Length = 158
Score = 69.3 bits (162), Expect = 1e-11
Identities = 39/83 (46%), Positives = 49/83 (59%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLER EERAE ++ K ELEEEL+ V NNLKSLE EK + E++I L
Sbjct: 43 LVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKIL 102
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+ KL SV KL+K
Sbjct: 103 TDKLKEAETRAEFAERSVAKLEK 125
>AL133410-1|CAI10975.1| 284|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 284
Score = 69.3 bits (162), Expect = 1e-11
Identities = 41/100 (41%), Positives = 57/100 (57%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E +LER+EERAE ++ K +LEEEL++V NNLKSLE +K + E++I L
Sbjct: 169 LVILEGELERSEERAEVAESKCGDLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLL 228
Query: 182 SQKLXXXXXXXXXXXXSVQKLQKEAIGLKTIWWPSAKRAN 301
+KL SV KL+K L+ SAK N
Sbjct: 229 EEKLKEAETRAEFAERSVAKLEKTIDDLEET-LASAKEEN 267
>AK092690-1|BAC03946.1| 243|Homo sapiens protein ( Homo sapiens
cDNA FLJ35371 fis, clone SKMUS2001740, highly similar to
TROPOMYOSIN ALPHA CHAIN, SKELETAL MUSCLE TYPE. ).
Length = 243
Score = 69.3 bits (162), Expect = 1e-11
Identities = 39/83 (46%), Positives = 49/83 (59%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLER EERAE ++ K ELEEEL+ V NNLKSLE EK + E++I L
Sbjct: 128 LVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKIL 187
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+ KL SV KL+K
Sbjct: 188 TDKLKEAETRAEFAERSVAKLEK 210
Score = 30.3 bits (65), Expect = 7.1
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 235 AETAKGGDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 348
A+ K D LED+L A++ K K + EE++ L+D+ ++
Sbjct: 206 AKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI 243
>X06825-1|CAA29971.1| 284|Homo sapiens protein ( Human mRNA for
skeletal beta-tropomyosin. ).
Length = 284
Score = 68.9 bits (161), Expect = 2e-11
Identities = 36/83 (43%), Positives = 51/83 (61%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E +LER+EERAE ++ K +LEEEL++V NNLKSLE +K + E++I L
Sbjct: 169 LVILEGELERSEERAEVAESKCGDLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLL 228
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+KL SV KL+K
Sbjct: 229 EEKLKEAETRAEFAERSVAKLEK 251
Score = 31.1 bits (67), Expect = 4.0
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 235 AETAKGGDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 348
A+ K D LED++ A++ K K + EE++ L+DI ++
Sbjct: 247 AKLEKTIDDLEDEVYAQKMKYKAISEELDNALNDITSL 284
>M12126-1|AAA61229.1| 131|Homo sapiens TPM2 protein.
Length = 131
Score = 68.9 bits (161), Expect = 2e-11
Identities = 36/83 (43%), Positives = 51/83 (61%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E +LER+EERAE ++ K +LEEEL++V NNLKSLE +K + E++I L
Sbjct: 16 LVILEGELERSEERAEVAESKCGDLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLL 75
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+KL SV KL+K
Sbjct: 76 EEKLKEAETRAEFAERSVAKLEK 98
Score = 31.1 bits (67), Expect = 4.0
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 235 AETAKGGDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 348
A+ K D LED++ A++ K K + EE++ L+DI ++
Sbjct: 94 AKLEKTIDDLEDEVYAQKMKYKAISEELDNALNDITSL 131
>AL133410-4|CAI10977.1| 284|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 284
Score = 68.9 bits (161), Expect = 2e-11
Identities = 36/83 (43%), Positives = 51/83 (61%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E +LER+EERAE ++ K +LEEEL++V NNLKSLE +K + E++I L
Sbjct: 169 LVILEGELERSEERAEVAESKCGDLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLL 228
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+KL SV KL+K
Sbjct: 229 EEKLKEAETRAEFAERSVAKLEK 251
Score = 31.1 bits (67), Expect = 4.0
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 235 AETAKGGDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 348
A+ K D LED++ A++ K K + EE++ L+DI ++
Sbjct: 247 AKLEKTIDDLEDEVYAQKMKYKAISEELDNALNDITSL 284
>AL133410-3|CAI10976.1| 322|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 322
Score = 68.9 bits (161), Expect = 2e-11
Identities = 36/83 (43%), Positives = 51/83 (61%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E +LER+EERAE ++ K +LEEEL++V NNLKSLE +K + E++I L
Sbjct: 169 LVILEGELERSEERAEVAESKCGDLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLL 228
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+KL SV KL+K
Sbjct: 229 EEKLKEAETRAEFAERSVAKLEK 251
>X12369-1|CAA30930.1| 227|Homo sapiens tropomyosin (227 AA)
protein.
Length = 227
Score = 66.9 bits (156), Expect = 7e-11
Identities = 34/83 (40%), Positives = 53/83 (63%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLERAEERAE S+ ++ +LEE+LR++ ++L+S+ +E+K + E++I L
Sbjct: 112 LVIIESDLERAEERAELSEGQVRQLEEQLRIMDSDLESINAAEDKYSQKEDRYEEEIKVL 171
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
S KL SV KL+K
Sbjct: 172 SDKLKEAETRAEFAERSVTKLEK 194
Score = 33.9 bits (74), Expect = 0.57
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
L +M+ DLE ++ K EEE++V+ + LK E E A S +E I L
Sbjct: 140 LRIMDSDLESINAAEDKYSQKEDRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDL 199
Query: 182 SQKL 193
+K+
Sbjct: 200 EEKV 203
>Z24727-1|CAA80853.1| 243|Homo sapiens tropomyosin isoform protein.
Length = 243
Score = 66.5 bits (155), Expect = 9e-11
Identities = 35/83 (42%), Positives = 51/83 (61%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLERAEERAE S+ ++ +LEE+LR++ LK+L +E+K + E++I L
Sbjct: 132 LVIIESDLERAEERAELSEGQVRQLEEQLRIMDQTLKALMAAEDKYSQKEDRYEEEIKVL 191
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
S KL SV KL+K
Sbjct: 192 SDKLKEAETRAEFAERSVTKLEK 214
Score = 30.7 bits (66), Expect = 5.3
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
L +M+Q L+ ++ K EEE++V+ + LK E E A S +E I L
Sbjct: 160 LRIMDQTLKALMAAEDKYSQKEDRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDL 219
Query: 182 SQKL 193
+K+
Sbjct: 220 EEKV 223
>M19715-1|AAA61227.1| 229|Homo sapiens TPM1 protein.
Length = 229
Score = 66.5 bits (155), Expect = 9e-11
Identities = 35/83 (42%), Positives = 51/83 (61%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLERAEERAE S+ ++ +LEE+LR++ LK+L +E+K + E++I L
Sbjct: 114 LVIIESDLERAEERAELSEGQVRQLEEQLRIMDQTLKALMAAEDKYSQKEDRYEEEIKVL 173
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
S KL SV KL+K
Sbjct: 174 SDKLKEAETRAEFAERSVTKLEK 196
Score = 30.7 bits (66), Expect = 5.3
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
L +M+Q L+ ++ K EEE++V+ + LK E E A S +E I L
Sbjct: 142 LRIMDQTLKALMAAEDKYSQKEDRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDL 201
Query: 182 SQKL 193
+K+
Sbjct: 202 EEKV 205
>M19267-1|AAA36771.1| 284|Homo sapiens protein ( Human tropomyosin
mRNA, complete cds. ).
Length = 284
Score = 66.5 bits (155), Expect = 9e-11
Identities = 35/83 (42%), Positives = 51/83 (61%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLERAEERAE S+ ++ +LEE+LR++ LK+L +E+K + E++I L
Sbjct: 169 LVIIESDLERAEERAELSEGQVRQLEEQLRIMDQTLKALMAAEDKYSQKEDRYEEEIKVL 228
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
S KL SV KL+K
Sbjct: 229 SDKLKEAETRAEFAERSVTKLEK 251
Score = 30.7 bits (66), Expect = 5.3
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
L +M+Q L+ ++ K EEE++V+ + LK E E A S +E I L
Sbjct: 197 LRIMDQTLKALMAAEDKYSQKEDRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDL 256
Query: 182 SQKL 193
+K+
Sbjct: 257 EEKV 260
>BC007433-1|AAH07433.1| 284|Homo sapiens tropomyosin 1 (alpha)
protein.
Length = 284
Score = 66.5 bits (155), Expect = 9e-11
Identities = 35/83 (42%), Positives = 51/83 (61%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLERAEERAE S+ ++ +LEE+LR++ LK+L +E+K + E++I L
Sbjct: 169 LVIIESDLERAEERAELSEGQVRQLEEQLRIMDQTLKALMAAEDKYSQKEDRYEEEIKVL 228
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
S KL SV KL+K
Sbjct: 229 SDKLKEAETRAEFAERSVTKLEK 251
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 247 KGGDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 348
K D LED+L A++ K K + EE++ L+D+ +M
Sbjct: 251 KSIDDLEDELYAQKLKYKAISEELDHALNDMTSM 284
>AF474156-1|AAL84569.1| 203|Homo sapiens TPMsk1 protein.
Length = 203
Score = 66.5 bits (155), Expect = 9e-11
Identities = 35/83 (42%), Positives = 51/83 (61%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLERAEERAE S+ ++ +LEE+LR++ LK+L +E+K + E++I L
Sbjct: 100 LVIIESDLERAEERAELSEGQVRQLEEQLRIMDQTLKALMAAEDKYSQKEDRYEEEIKVL 159
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
S KL SV KL+K
Sbjct: 160 SDKLKEAETRAEFAERSVTKLEK 182
>AF362887-1|AAK51964.1| 142|Homo sapiens tropomyosin 4-anaplastic
lymphoma kinase fusion protein minor isoform protein.
Length = 142
Score = 66.5 bits (155), Expect = 9e-11
Identities = 36/81 (44%), Positives = 50/81 (61%)
Frame = +2
Query: 8 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQ 187
L+E++L+RA+ERAE S+ K +LEEEL+ V NNLKSLE + EK + E++I LS
Sbjct: 26 LVEEELDRAQERAEVSELKCGDLEEELKNVTNNLKSLEAASEKYSEKEDKYEEEIKLLSD 85
Query: 188 KLXXXXXXXXXXXXSVQKLQK 250
KL +V KL+K
Sbjct: 86 KLKEAETRAEFAERTVAKLEK 106
>DQ424903-1|ABD83668.1| 245|Homo sapiens tropomyosin 1 alpha
variant 6 protein.
Length = 245
Score = 63.7 bits (148), Expect = 6e-10
Identities = 34/83 (40%), Positives = 50/83 (60%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLERAEERAE S+ ++ +LEE+LR++ LK+L +E+K + E++I L
Sbjct: 133 LVIIESDLERAEERAELSEGQVRQLEEQLRIMDQTLKALMAAEDKYSQKEDRYEEEIKVL 192
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
S K SV KL+K
Sbjct: 193 SDKPKEAETRAEFAERSVTKLEK 215
>M75165-1|AAB59509.1| 284|Homo sapiens tropomyosin protein.
Length = 284
Score = 62.5 bits (145), Expect = 1e-09
Identities = 39/100 (39%), Positives = 55/100 (55%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E +LER+EERAE ++ + +LEEELR + LKSL SEE+ + E++I L
Sbjct: 169 LVILEGELERSEERAEVAESRARQLEEELRTMDQALKSLMASEEEYSTKEDKYEEEIKLL 228
Query: 182 SQKLXXXXXXXXXXXXSVQKLQKEAIGLKTIWWPSAKRAN 301
+KL SV KL+K L+ SAK N
Sbjct: 229 EEKLKEAETRAEFAERSVAKLEKTIDDLEET-LASAKEEN 267
>M74817-1|AAA61230.1| 284|Homo sapiens tropomyosin-1 protein.
Length = 284
Score = 62.5 bits (145), Expect = 1e-09
Identities = 39/100 (39%), Positives = 55/100 (55%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E +LER+EERAE ++ + +LEEELR + LKSL SEE+ + E++I L
Sbjct: 169 LVILEGELERSEERAEVAESRARQLEEELRTMDQALKSLMASEEEYSTKEDKYEEEIKLL 228
Query: 182 SQKLXXXXXXXXXXXXSVQKLQKEAIGLKTIWWPSAKRAN 301
+KL SV KL+K L+ SAK N
Sbjct: 229 EEKLKEAETRAEFAERSVAKLEKTIDDLEET-LASAKEEN 267
>M12125-1|AAA36773.1| 284|Homo sapiens protein ( Human fibroblast
muscle-type tropomyosin mRNA, complete cds. ).
Length = 284
Score = 62.5 bits (145), Expect = 1e-09
Identities = 39/100 (39%), Positives = 55/100 (55%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E +LER+EERAE ++ + +LEEELR + LKSL SEE+ + E++I L
Sbjct: 169 LVILEGELERSEERAEVAESRARQLEEELRTMDQALKSLMASEEEYSTKEDKYEEEIKLL 228
Query: 182 SQKLXXXXXXXXXXXXSVQKLQKEAIGLKTIWWPSAKRAN 301
+KL SV KL+K L+ SAK N
Sbjct: 229 EEKLKEAETRAEFAERSVAKLEKTIDDLEET-LASAKEEN 267
>BC011776-1|AAH11776.1| 284|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 284
Score = 62.5 bits (145), Expect = 1e-09
Identities = 39/100 (39%), Positives = 55/100 (55%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E +LER+EERAE ++ + +LEEELR + LKSL SEE+ + E++I L
Sbjct: 169 LVILEGELERSEERAEVAESRARQLEEELRTMDQALKSLMASEEEYSTKEDKYEEEIKLL 228
Query: 182 SQKLXXXXXXXXXXXXSVQKLQKEAIGLKTIWWPSAKRAN 301
+KL SV KL+K L+ SAK N
Sbjct: 229 EEKLKEAETRAEFAERSVAKLEKTIDDLEET-LASAKEEN 267
>AL133410-2|CAI10974.1| 284|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 284
Score = 62.5 bits (145), Expect = 1e-09
Identities = 39/100 (39%), Positives = 55/100 (55%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E +LER+EERAE ++ + +LEEELR + LKSL SEE+ + E++I L
Sbjct: 169 LVILEGELERSEERAEVAESRARQLEEELRTMDQALKSLMASEEEYSTKEDKYEEEIKLL 228
Query: 182 SQKLXXXXXXXXXXXXSVQKLQKEAIGLKTIWWPSAKRAN 301
+KL SV KL+K L+ SAK N
Sbjct: 229 EEKLKEAETRAEFAERSVAKLEKTIDDLEET-LASAKEEN 267
>AK223258-1|BAD96978.1| 284|Homo sapiens tropomyosin 2 (beta)
isoform 2 variant protein.
Length = 284
Score = 62.5 bits (145), Expect = 1e-09
Identities = 39/100 (39%), Positives = 55/100 (55%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E +LER+EERAE ++ + +LEEELR + LKSL SEE+ + E++I L
Sbjct: 169 LVILEGELERSEERAEVAESRARQLEEELRTMDQALKSLMASEEEYSTKEDKYEEEIKLL 228
Query: 182 SQKLXXXXXXXXXXXXSVQKLQKEAIGLKTIWWPSAKRAN 301
+KL SV KL+K L+ SAK N
Sbjct: 229 EEKLKEAETRAEFAERSVAKLEKTIDDLEET-LASAKEEN 267
>X04588-1|CAB37185.1| 248|Homo sapiens protein ( Human 2.5 kb mRNA
for cytoskeletal tropomyosin TM30(nm). ).
Length = 248
Score = 62.1 bits (144), Expect = 2e-09
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLER EERAE ++ + E++E++R++ NLK L +EEK + E++I L
Sbjct: 133 LVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLSAAEEKYSQKEDKYEEEIKIL 192
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+ KL SV KL+K
Sbjct: 193 TDKLKEAETRAEFAERSVAKLEK 215
Score = 32.3 bits (70), Expect = 1.7
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +2
Query: 8 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQ 187
LM+Q+L+ E+ K + EEE++++ + LK E E A S +E I L
Sbjct: 163 LMDQNLKCLSAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLED 222
Query: 188 KL 193
KL
Sbjct: 223 KL 224
>X03541-1|CAA27243.1| 641|Homo sapiens protein ( Human mRNA of trk
oncogene. ).
Length = 641
Score = 62.1 bits (144), Expect = 2e-09
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLER EERAE ++ + E++E++R++ NLK L +EEK + E++I L
Sbjct: 133 LVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLSAAEEKYSQKEDKYEEEIKIL 192
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+ KL SV KL+K
Sbjct: 193 TDKLKEAETRAEFAERSVAKLEK 215
>M12128-1|AAA36775.1| 96|Homo sapiens protein ( Human cytoskeletal
tropomyosin isoform (2.5 kb) mRNA, 3' end. ).
Length = 96
Score = 62.1 bits (144), Expect = 2e-09
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLER EERAE ++ + E++E++R++ NLK L +EEK + E++I L
Sbjct: 9 LVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLSAAEEKYSQKEDKYEEEIKIL 68
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+ KL SV KL+K
Sbjct: 69 TDKLKEAETRAEFAERSVAKLEK 91
>BC072428-1|AAH72428.1| 248|Homo sapiens tropomyosin 3 protein.
Length = 248
Score = 62.1 bits (144), Expect = 2e-09
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLER EERAE ++ + E++E++R++ NLK L +EEK + E++I L
Sbjct: 133 LVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLSAAEEKYSQKEDKYEEEIKIL 192
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+ KL SV KL+K
Sbjct: 193 TDKLKEAETRAEFAERSVAKLEK 215
Score = 32.3 bits (70), Expect = 1.7
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +2
Query: 8 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQ 187
LM+Q+L+ E+ K + EEE++++ + LK E E A S +E I L
Sbjct: 163 LMDQNLKCLSAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLED 222
Query: 188 KL 193
KL
Sbjct: 223 KL 224
>BC015403-1|AAH15403.1| 248|Homo sapiens tropomyosin 3 protein.
Length = 248
Score = 62.1 bits (144), Expect = 2e-09
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLER EERAE ++ + E++E++R++ NLK L +EEK + E++I L
Sbjct: 133 LVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLSAAEEKYSQKEDKYEEEIKIL 192
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+ KL SV KL+K
Sbjct: 193 TDKLKEAETRAEFAERSVAKLEK 215
Score = 32.3 bits (70), Expect = 1.7
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +2
Query: 8 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQ 187
LM+Q+L+ E+ K + EEE++++ + LK E E A S +E I L
Sbjct: 163 LMDQNLKCLSAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLED 222
Query: 188 KL 193
KL
Sbjct: 223 KL 224
>BC000771-1|AAH00771.1| 248|Homo sapiens tropomyosin 3 protein.
Length = 248
Score = 62.1 bits (144), Expect = 2e-09
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLER EERAE ++ + E++E++R++ NLK L +EEK + E++I L
Sbjct: 133 LVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLSAAEEKYSQKEDKYEEEIKIL 192
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+ KL SV KL+K
Sbjct: 193 TDKLKEAETRAEFAERSVAKLEK 215
Score = 32.3 bits (70), Expect = 1.7
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +2
Query: 8 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQ 187
LM+Q+L+ E+ K + EEE++++ + LK E E A S +E I L
Sbjct: 163 LMDQNLKCLSAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLED 222
Query: 188 KL 193
KL
Sbjct: 223 KL 224
>AY004867-1|AAF87083.1| 247|Homo sapiens tropomyosin isoform
protein.
Length = 247
Score = 62.1 bits (144), Expect = 2e-09
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLER EERAE ++ + E++E++R++ NLK L +EEK + E++I L
Sbjct: 133 LVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLSAAEEKYSQKEDKYEEEIKIL 192
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+ KL SV KL+K
Sbjct: 193 TDKLKEAETRAEFAERSVAKLEK 215
Score = 31.9 bits (69), Expect = 2.3
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +2
Query: 8 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQ 187
LM+Q+L+ E+ K + EEE++++ + LK E E A S +E I L +
Sbjct: 163 LMDQNLKCLSAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEE 222
Query: 188 KL 193
+L
Sbjct: 223 RL 224
>AL590431-8|CAH71264.1| 248|Homo sapiens tropomyosin 3 protein.
Length = 248
Score = 62.1 bits (144), Expect = 2e-09
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLER EERAE ++ + E++E++R++ NLK L +EEK + E++I L
Sbjct: 133 LVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLSAAEEKYSQKEDKYEEEIKIL 192
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+ KL SV KL+K
Sbjct: 193 TDKLKEAETRAEFAERSVAKLEK 215
Score = 32.3 bits (70), Expect = 1.7
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +2
Query: 8 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQ 187
LM+Q+L+ E+ K + EEE++++ + LK E E A S +E I L
Sbjct: 163 LMDQNLKCLSAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLED 222
Query: 188 KL 193
KL
Sbjct: 223 KL 224
>AL590431-7|CAH71266.1| 248|Homo sapiens tropomyosin 3 protein.
Length = 248
Score = 62.1 bits (144), Expect = 2e-09
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLER EERAE ++ + E++E++R++ NLK L +EEK + E++I L
Sbjct: 133 LVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLSAAEEKYSQKEDKYEEEIKIL 192
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+ KL SV KL+K
Sbjct: 193 TDKLKEAETRAEFAERSVAKLEK 215
Score = 30.7 bits (66), Expect = 5.3
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +2
Query: 8 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQ 187
LM+Q+L+ E+ K + EEE++++ + LK E E A S +E I L
Sbjct: 163 LMDQNLKCLSAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLED 222
Query: 188 KL 193
+L
Sbjct: 223 EL 224
Score = 30.3 bits (65), Expect = 7.1
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 235 AETAKGGDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 348
A+ K D LED+L A++ K K + EE++ L+D+ ++
Sbjct: 211 AKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI 248
>AL590431-6|CAH71265.1| 232|Homo sapiens tropomyosin 3 protein.
Length = 232
Score = 62.1 bits (144), Expect = 2e-09
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLER EERAE ++ + E++E++R++ NLK L +EEK + E++I L
Sbjct: 117 LVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLSAAEEKYSQKEDKYEEEIKIL 176
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+ KL SV KL+K
Sbjct: 177 TDKLKEAETRAEFAERSVAKLEK 199
Score = 32.3 bits (70), Expect = 1.7
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +2
Query: 8 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQ 187
LM+Q+L+ E+ K + EEE++++ + LK E E A S +E I L
Sbjct: 147 LMDQNLKCLSAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLED 206
Query: 188 KL 193
KL
Sbjct: 207 KL 208
>AL590431-5|CAH71263.1| 224|Homo sapiens tropomyosin 3 protein.
Length = 224
Score = 62.1 bits (144), Expect = 2e-09
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLER EERAE ++ + E++E++R++ NLK L +EEK + E++I L
Sbjct: 109 LVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLSAAEEKYSQKEDKYEEEIKIL 168
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+ KL SV KL+K
Sbjct: 169 TDKLKEAETRAEFAERSVAKLEK 191
Score = 32.3 bits (70), Expect = 1.7
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +2
Query: 8 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQ 187
LM+Q+L+ E+ K + EEE++++ + LK E E A S +E I L
Sbjct: 139 LMDQNLKCLSAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLED 198
Query: 188 KL 193
KL
Sbjct: 199 KL 200
>AK092712-1|BAC03956.1| 183|Homo sapiens protein ( Homo sapiens
cDNA FLJ35393 fis, clone SKNSH2000971, highly similar to
TROPOMYOSIN, CYTOSKELETAL TYPE. ).
Length = 183
Score = 62.1 bits (144), Expect = 2e-09
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLER EERAE ++ + E++E++R++ NLK L +EEK + E++I L
Sbjct: 68 LVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLSAAEEKYSQKEDKYEEEIKIL 127
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+ KL SV KL+K
Sbjct: 128 TDKLKEAETRAEFAERSVAKLEK 150
Score = 32.3 bits (70), Expect = 1.7
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +2
Query: 8 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQ 187
LM+Q+L+ E+ K + EEE++++ + LK E E A S +E I L
Sbjct: 98 LMDQNLKCLSAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLED 157
Query: 188 KL 193
KL
Sbjct: 158 KL 159
>AF474157-1|AAL84570.1| 247|Homo sapiens TPMsk3 protein.
Length = 247
Score = 62.1 bits (144), Expect = 2e-09
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E DLER EERAE ++ + E++E++R++ NLK L +EEK + E++I L
Sbjct: 133 LVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLSAAEEKYSQKEDKYEEEIKIL 192
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+ KL SV KL+K
Sbjct: 193 TDKLKEAETRAEFAERSVAKLEK 215
Score = 30.7 bits (66), Expect = 5.3
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +2
Query: 8 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQ 187
LM+Q+L+ E+ K + EEE++++ + LK E E A S +E I L
Sbjct: 163 LMDQNLKCLSAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLED 222
Query: 188 KL 193
+L
Sbjct: 223 EL 224
Score = 29.9 bits (64), Expect = 9.3
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 235 AETAKGGDRLEDDLVAEREKSKLLQEEMEATLHDI 339
A+ K D LED+L A++ K K + EE++ L+D+
Sbjct: 211 AKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 245
>AF209746-1|AAF17621.1| 257|Homo sapiens beta tropomyosin protein.
Length = 257
Score = 62.1 bits (144), Expect = 2e-09
Identities = 34/83 (40%), Positives = 49/83 (59%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV++E +LER+EERAE ++ + +LEEELR + LKSL SEE+ + E++I L
Sbjct: 169 LVILEGELERSEERAEVAESRARQLEEELRTMDQALKSLMASEEEYSTKEDKYEEEIKLL 228
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+KL SV KL+K
Sbjct: 229 EEKLKEAETRAEFAERSVAKLEK 251
>AK129882-1|BAC85248.1| 217|Homo sapiens protein ( Homo sapiens
cDNA FLJ26372 fis, clone HRT06233. ).
Length = 217
Score = 58.4 bits (135), Expect = 2e-08
Identities = 38/91 (41%), Positives = 49/91 (53%), Gaps = 10/91 (10%)
Frame = +2
Query: 8 LMEQDLERAEER----------AEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREH 157
L+E++L+RA+ER AE S+ K ELEEEL+ V NNLKSLE EK +
Sbjct: 94 LVEEELDRAQERLATALQKLEEAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDR 153
Query: 158 VEDKIHSLSQKLXXXXXXXXXXXXSVQKLQK 250
E++I LS KL SV KL+K
Sbjct: 154 YEEEIKVLSDKLKEAETRAEFAERSVTKLEK 184
Score = 29.9 bits (64), Expect = 9.3
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 247 KGGDRLEDDLVAEREKSKLLQEEMEATLHDIQNM 348
K D LED+L A++ K K + EE++ L+D+ ++
Sbjct: 184 KSIDDLEDELYAQKLKYKAISEELDHALNDMTSI 217
>DQ120714-1|ABC40673.1| 247|Homo sapiens rcTPM3 protein.
Length = 247
Score = 56.4 bits (130), Expect = 9e-08
Identities = 30/83 (36%), Positives = 46/83 (55%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
LV +E DLER EERAE ++ + E++E++R++ NLK L +EEK + E++I
Sbjct: 132 LVTIEGDLERTEERAELTESRCREMDEQIRLMDQNLKCLSAAEEKYSQKEDKYEEEIKIF 191
Query: 182 SQKLXXXXXXXXXXXXSVQKLQK 250
+ K SV KL+K
Sbjct: 192 TDKPKEAETCAEFAERSVAKLEK 214
>AL590431-2|CAH71260.1| 233|Homo sapiens tropomyosin 3 protein.
Length = 233
Score = 39.5 bits (88), Expect = 0.012
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +2
Query: 71 ELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQKLXXXXXXXXXXXXSVQKLQK 250
E++E++R++ NLK L +EEK + E++I L+ KL SV KL+K
Sbjct: 141 EMDEQIRLMDQNLKCLSAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEK 200
Score = 32.3 bits (70), Expect = 1.7
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +2
Query: 8 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQ 187
LM+Q+L+ E+ K + EEE++++ + LK E E A S +E I L
Sbjct: 148 LMDQNLKCLSAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLED 207
Query: 188 KL 193
KL
Sbjct: 208 KL 209
>AF362886-1|AAK51963.1| 103|Homo sapiens tropomyosin 4-anaplastic
lymphoma kinase fusion protein major isoform protein.
Length = 103
Score = 39.1 bits (87), Expect = 0.015
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +2
Query: 50 QSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQKLXXXXXXXXXXXX 229
+S C+ E++E++R++ NLK L +EEK + E++I L+ KL
Sbjct: 3 ESRCR--EMDEQIRLMDQNLKCLSAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAER 60
Query: 230 SVQKLQK 250
+V KL+K
Sbjct: 61 TVAKLEK 67
>AB062125-1|BAB93457.1| 92|Homo sapiens cytoskeletal tropomyosin
TM30 protein.
Length = 92
Score = 37.5 bits (83), Expect = 0.047
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +2
Query: 74 LEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQKLXXXXXXXXXXXXSVQKLQK 250
++E++R++ NLK L +EEK + E++I L+ KL SV KL+K
Sbjct: 1 MDEQIRLMDQNLKCLSAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEK 59
Score = 32.3 bits (70), Expect = 1.7
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +2
Query: 8 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQ 187
LM+Q+L+ E+ K + EEE++++ + LK E E A S +E I L
Sbjct: 7 LMDQNLKCLSAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLED 66
Query: 188 KL 193
KL
Sbjct: 67 KL 68
>Y10351-1|CAA71377.1| 711|Homo sapiens nuclear protein SDK3
protein.
Length = 711
Score = 33.5 bits (73), Expect = 0.76
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +2
Query: 17 QDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQK 190
Q + E++AEQ + K+ + EEEL GN +E+ E+A E +HS ++K
Sbjct: 290 QVVRNEEQKAEQEEGKVAQREEELEETGNQHNDVEI--EEAGEEEEKEIAIVHSDAEK 345
>Y09703-1|CAA70874.1| 586|Homo sapiens MEMA protein.
Length = 586
Score = 33.5 bits (73), Expect = 0.76
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +2
Query: 17 QDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQK 190
Q + E++AEQ + K+ + EEEL GN +E+ E+A E +HS ++K
Sbjct: 163 QVVRNEEQKAEQEEGKVAQREEELEETGNQHNDVEI--EEAGEEEEKEIAIVHSDAEK 218
>BC062602-1|AAH62602.1| 717|Homo sapiens pinin, desmosome
associated protein protein.
Length = 717
Score = 33.5 bits (73), Expect = 0.76
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +2
Query: 17 QDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQK 190
Q + E++AEQ + K+ + EEEL GN +E+ E+A E +HS ++K
Sbjct: 296 QVVRNEEQKAEQEEGKVAQREEELEETGNQHNDVEI--EEAGEEEEKEIAIVHSDAEK 351
>BC061910-1|AAH61910.1| 92|Homo sapiens tropomyosin 3 pseudogene
protein.
Length = 92
Score = 33.5 bits (73), Expect = 0.76
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +2
Query: 8 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQ 187
LM+Q+L+ E+ K + EEE +++ +NLK E E A S +E I L
Sbjct: 7 LMDQNLKCLSAAEEKYSQKEDKCEEERKILTDNLKEAETHAELAERSVAKLEKTIDDLED 66
Query: 188 KL 193
KL
Sbjct: 67 KL 68
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 74 LEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQKLXXXXXXXXXXXXSVQKLQK 250
++E++R++ NLK L +EEK + E++ L+ L SV KL+K
Sbjct: 1 MDEQIRLMDQNLKCLSAAEEKYSQKEDKCEEERKILTDNLKEAETHAELAERSVAKLEK 59
>AK223612-1|BAD97332.1| 717|Homo sapiens pinin, desmosome
associated protein variant protein.
Length = 717
Score = 33.5 bits (73), Expect = 0.76
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +2
Query: 17 QDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQK 190
Q + E++AEQ + K+ + EEEL GN +E+ E+A E +HS ++K
Sbjct: 296 QVVRNEEQKAEQEEGKVAQREEELEETGNQHNDVEI--EEAGEEEEKEIAIVHSDAEK 351
>AF195139-1|AAG33941.1| 717|Homo sapiens pinin protein.
Length = 717
Score = 33.5 bits (73), Expect = 0.76
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +2
Query: 17 QDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQK 190
Q + E++AEQ + K+ + EEEL GN +E+ E+A E +HS ++K
Sbjct: 296 QVVRNEEQKAEQEEGKVAQREEELEETGNQHNDVEI--EEAGEEEEKEIAIVHSDAEK 351
>AF112222-1|AAF17209.1| 717|Homo sapiens nuclear protein SDK3
protein.
Length = 717
Score = 33.5 bits (73), Expect = 0.76
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +2
Query: 17 QDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQK 190
Q + E++AEQ + K+ + EEEL GN +E+ E+A E +HS ++K
Sbjct: 296 QVVRNEEQKAEQEEGKVAQREEELEETGNQHNDVEI--EEAGEEEEKEIAIVHSDAEK 351
>AB046860-1|BAB13466.1| 940|Homo sapiens KIAA1640 protein protein.
Length = 940
Score = 32.7 bits (71), Expect = 1.3
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVE 163
L +MEQ R E + EQ + E+E ++ + N+LK L + K S E +E
Sbjct: 603 LHIMEQKKLRVESKIEQEKKEQKEIEHHMKDLDNDLKKLNMLMNKNRCSSEELE 656
>U77718-1|AAB48304.1| 743|Homo sapiens pinin protein.
Length = 743
Score = 31.9 bits (69), Expect = 2.3
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +2
Query: 17 QDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQK 190
Q + E +AEQ + K+ + EEEL GN +E+ E+A E +HS ++K
Sbjct: 295 QVVRNEEHKAEQEEGKVAQREEELVETGNQHNDVEI--EEAGEEEEKEIGIVHSDAEK 350
>Z94057-1|CAI21650.1| 1358|Homo sapiens tenascin R (restrictin,
janusin) protein.
Length = 1358
Score = 31.5 bits (68), Expect = 3.1
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +2
Query: 14 EQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHV 160
E+ L EE + DC V E+LRV G + +S+E+ + MA E+V
Sbjct: 308 EEGLCVCEEGYQGPDCSAVAPPEDLRVAGISDRSIELEWDGPMAVTEYV 356
>Z94055-1|CAI19943.1| 1358|Homo sapiens tenascin R (restrictin,
janusin) protein.
Length = 1358
Score = 31.5 bits (68), Expect = 3.1
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +2
Query: 14 EQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHV 160
E+ L EE + DC V E+LRV G + +S+E+ + MA E+V
Sbjct: 308 EEGLCVCEEGYQGPDCSAVAPPEDLRVAGISDRSIELEWDGPMAVTEYV 356
>Z67996-1|CAA91947.1| 1358|Homo sapiens tenascin-R (restrictin)
protein.
Length = 1358
Score = 31.5 bits (68), Expect = 3.1
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +2
Query: 14 EQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHV 160
E+ L EE + DC V E+LRV G + +S+E+ + MA E+V
Sbjct: 308 EEGLCVCEEGYQGPDCSAVAPPEDLRVAGISDRSIELEWDGPMAVTEYV 356
>X98085-1|CAA66709.1| 1358|Homo sapiens tenascin-R protein.
Length = 1358
Score = 31.5 bits (68), Expect = 3.1
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +2
Query: 14 EQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHV 160
E+ L EE + DC V E+LRV G + +S+E+ + MA E+V
Sbjct: 308 EEGLCVCEEGYQGPDCSAVAPPEDLRVAGISDRSIELEWDGPMAVTEYV 356
>BC129830-1|AAI29831.1| 1257|Homo sapiens TNR protein protein.
Length = 1257
Score = 31.5 bits (68), Expect = 3.1
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +2
Query: 14 EQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHV 160
E+ L EE + DC V E+LRV G + +S+E+ + MA E+V
Sbjct: 207 EEGLCVCEEGYQGPDCSAVAPPEDLRVAGISDRSIELEWDGPMAVTEYV 255
>BC026213-1|AAH26213.1| 529|Homo sapiens F-box and WD repeat domain
containing 11 protein.
Length = 529
Score = 31.5 bits (68), Expect = 3.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 659 KKNCTWQVAY*TRGILTLHKKKAAGNYSKSSNI 561
KKN WQ++ T ++ K+ + GNY K ++
Sbjct: 30 KKNTLWQISNGTSSVIVSRKRPSEGNYQKEKDL 62
>AY681966-1|AAV87216.1| 2069|Homo sapiens citron protein.
Length = 2069
Score = 31.5 bits (68), Expect = 3.1
Identities = 20/82 (24%), Positives = 41/82 (50%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQK 190
++ D++ ++ +Q KI+ELEE+ R + + LEV ++ +H E+KI L +
Sbjct: 717 LKDDIQTKSQQIQQMADKILELEEKHREAQVSAQHLEVHLKQ---KEQHYEEKIKVLDNQ 773
Query: 191 LXXXXXXXXXXXXSVQKLQKEA 256
+ +Q+ ++EA
Sbjct: 774 IKKDLADKETLENMMQRHEEEA 795
>AB033280-1|BAA92330.1| 529|Homo sapiens F-box and WD-repeats
protein beta-TRCP2 isoform B protein.
Length = 529
Score = 31.5 bits (68), Expect = 3.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 659 KKNCTWQVAY*TRGILTLHKKKAAGNYSKSSNI 561
KKN WQ++ T ++ K+ + GNY K ++
Sbjct: 30 KKNTLWQISNGTSSVIVSRKRPSEGNYQKEKDL 62
>BX640896-1|CAE45944.1| 1359|Homo sapiens hypothetical protein
protein.
Length = 1359
Score = 31.1 bits (67), Expect = 4.0
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMAS-REHVEDKIHSLSQ 187
+E+DLE A + DC I +L E+ + N + E + E S K+H+ Q
Sbjct: 219 LEKDLEEAHREKSKGDCTIRDLRNEVEKLRNEVNEREKAMENRYKSLLSESNKKLHNQEQ 278
>BX537759-1|CAD97828.1| 1763|Homo sapiens hypothetical protein
protein.
Length = 1763
Score = 31.1 bits (67), Expect = 4.0
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMAS-REHVEDKIHSLSQ 187
+E+DLE A + DC I +L E+ + N + E + E S K+H+ Q
Sbjct: 418 LEKDLEEAHREKSKGDCTIRDLRNEVEKLRNEVNEREKAMENRYKSLLSESNKKLHNQEQ 477
>BX537708-1|CAD97819.1| 1605|Homo sapiens hypothetical protein
protein.
Length = 1605
Score = 31.1 bits (67), Expect = 4.0
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMAS-REHVEDKIHSLSQ 187
+E+DLE A + DC I +L E+ + N + E + E S K+H+ Q
Sbjct: 418 LEKDLEEAHREKSKGDCTIRDLRNEVEKLRNEVNEREKAMENRYKSLLSESNKKLHNQEQ 477
>BX537421-1|CAD97663.1| 1204|Homo sapiens hypothetical protein
protein.
Length = 1204
Score = 31.1 bits (67), Expect = 4.0
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMAS-REHVEDKIHSLSQ 187
+E+DLE A + DC I +L E+ + N + E + E S K+H+ Q
Sbjct: 418 LEKDLEEAHREKSKGDCTIRDLRNEVEKLRNEVNEREKAMENRYKSLLSESNKKLHNQEQ 477
>BC146782-1|AAI46783.1| 1814|Homo sapiens CDK5 regulatory subunit
associated protein 2 protein.
Length = 1814
Score = 31.1 bits (67), Expect = 4.0
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMAS-REHVEDKIHSLSQ 187
+E+DLE A + DC I +L E+ + N + E + E S K+H+ Q
Sbjct: 418 LEKDLEEAHREKSKGDCTIRDLRNEVEKLRNEVNEREKAMENRYKSLLSESNKKLHNQEQ 477
>BC026171-1|AAH26171.1| 778|Homo sapiens FAM47A protein protein.
Length = 778
Score = 31.1 bits (67), Expect = 4.0
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -1
Query: 322 PPSPPAGVCSFRARPPDRLQAYRLLLQFL 236
P P GVC R PPD Q LLL L
Sbjct: 401 PVPPKTGVCHLRLEPPDTSQVSNLLLYIL 429
>AL591625-1|CAI41438.1| 791|Homo sapiens family with sequence
similarity 47, member A protein.
Length = 791
Score = 31.1 bits (67), Expect = 4.0
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -1
Query: 322 PPSPPAGVCSFRARPPDRLQAYRLLLQFL 236
P P GVC R PPD Q LLL L
Sbjct: 401 PVPPKTGVCHLRLEPPDTSQVSNLLLYIL 429
>AL590642-2|CAH70770.1| 862|Homo sapiens CDK5 regulatory subunit
associated protein 2 protein.
Length = 862
Score = 31.1 bits (67), Expect = 4.0
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMAS-REHVEDKIHSLSQ 187
+E+DLE A + DC I +L E+ + N + E + E S K+H+ Q
Sbjct: 418 LEKDLEEAHREKSKGDCTIRDLRNEVEKLRNEVNEREKAMENRYKSLLSESNKKLHNQEQ 477
>AL590642-1|CAH70769.1| 1893|Homo sapiens CDK5 regulatory subunit
associated protein 2 protein.
Length = 1893
Score = 31.1 bits (67), Expect = 4.0
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMAS-REHVEDKIHSLSQ 187
+E+DLE A + DC I +L E+ + N + E + E S K+H+ Q
Sbjct: 418 LEKDLEEAHREKSKGDCTIRDLRNEVEKLRNEVNEREKAMENRYKSLLSESNKKLHNQEQ 477
>AL391870-2|CAI40926.1| 862|Homo sapiens CDK5 regulatory subunit
associated protein 2 protein.
Length = 862
Score = 31.1 bits (67), Expect = 4.0
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMAS-REHVEDKIHSLSQ 187
+E+DLE A + DC I +L E+ + N + E + E S K+H+ Q
Sbjct: 418 LEKDLEEAHREKSKGDCTIRDLRNEVEKLRNEVNEREKAMENRYKSLLSESNKKLHNQEQ 477
>AL391870-1|CAI40925.1| 1893|Homo sapiens CDK5 regulatory subunit
associated protein 2 protein.
Length = 1893
Score = 31.1 bits (67), Expect = 4.0
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMAS-REHVEDKIHSLSQ 187
+E+DLE A + DC I +L E+ + N + E + E S K+H+ Q
Sbjct: 418 LEKDLEEAHREKSKGDCTIRDLRNEVEKLRNEVNEREKAMENRYKSLLSESNKKLHNQEQ 477
>AL353736-2|CAI40654.1| 862|Homo sapiens CDK5 regulatory subunit
associated protein 2 protein.
Length = 862
Score = 31.1 bits (67), Expect = 4.0
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMAS-REHVEDKIHSLSQ 187
+E+DLE A + DC I +L E+ + N + E + E S K+H+ Q
Sbjct: 418 LEKDLEEAHREKSKGDCTIRDLRNEVEKLRNEVNEREKAMENRYKSLLSESNKKLHNQEQ 477
>AL353736-1|CAI40653.1| 1893|Homo sapiens CDK5 regulatory subunit
associated protein 2 protein.
Length = 1893
Score = 31.1 bits (67), Expect = 4.0
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMAS-REHVEDKIHSLSQ 187
+E+DLE A + DC I +L E+ + N + E + E S K+H+ Q
Sbjct: 418 LEKDLEEAHREKSKGDCTIRDLRNEVEKLRNEVNEREKAMENRYKSLLSESNKKLHNQEQ 477
>AL138836-2|CAI16964.1| 862|Homo sapiens CDK5 regulatory subunit
associated protein 2 protein.
Length = 862
Score = 31.1 bits (67), Expect = 4.0
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMAS-REHVEDKIHSLSQ 187
+E+DLE A + DC I +L E+ + N + E + E S K+H+ Q
Sbjct: 418 LEKDLEEAHREKSKGDCTIRDLRNEVEKLRNEVNEREKAMENRYKSLLSESNKKLHNQEQ 477
>AL138836-1|CAI16963.1| 1893|Homo sapiens CDK5 regulatory subunit
associated protein 2 protein.
Length = 1893
Score = 31.1 bits (67), Expect = 4.0
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMAS-REHVEDKIHSLSQ 187
+E+DLE A + DC I +L E+ + N + E + E S K+H+ Q
Sbjct: 418 LEKDLEEAHREKSKGDCTIRDLRNEVEKLRNEVNEREKAMENRYKSLLSESNKKLHNQEQ 477
>AF448860-1|AAP41926.1| 1893|Homo sapiens hypothetical protein
protein.
Length = 1893
Score = 31.1 bits (67), Expect = 4.0
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMAS-REHVEDKIHSLSQ 187
+E+DLE A + DC I +L E+ + N + E + E S K+H+ Q
Sbjct: 418 LEKDLEEAHREKSKGDCTIRDLRNEVEKLRNEVNEREKAMENRYKSLLSESNKKLHNQEQ 477
>AB046853-1|BAB13459.2| 1852|Homo sapiens KIAA1633 protein protein.
Length = 1852
Score = 31.1 bits (67), Expect = 4.0
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMAS-REHVEDKIHSLSQ 187
+E+DLE A + DC I +L E+ + N + E + E S K+H+ Q
Sbjct: 456 LEKDLEEAHREKSKGDCTIRDLRNEVEKLRNEVNEREKAMENRYKSLLSESNKKLHNQEQ 515
>AB023217-1|BAA76844.2| 1956|Homo sapiens KIAA1000 protein protein.
Length = 1956
Score = 31.1 bits (67), Expect = 4.0
Identities = 22/87 (25%), Positives = 36/87 (41%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQK 190
+EQ ++ E EQ + E EL + NLK S E +S+ H+ +++ +
Sbjct: 1049 LEQQVDELEGALEQERKARMNCERELHKLEGNLKLNRESMENLESSQRHLAEELRKKELE 1108
Query: 191 LXXXXXXXXXXXXSVQKLQKEAIGLKT 271
L V +LQK L+T
Sbjct: 1109 LSQMNSKVENEKGLVAQLQKTVKELQT 1135
>Z15005-1|CAA78727.1| 2663|Homo sapiens CENP-E protein.
Length = 2663
Score = 30.3 bits (65), Expect = 7.1
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQK 190
M++DLE + + + D KI +EELR+ +LK + + +K DK+ ++ +
Sbjct: 1754 MQKDLEHSNDALKAQDLKI---QEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKD 1810
Query: 191 L 193
L
Sbjct: 1811 L 1811
>D29642-1|BAA06125.2| 666|Homo sapiens KIAA0053 protein.
Length = 666
Score = 30.3 bits (65), Expect = 7.1
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +2
Query: 8 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQ 187
+ E+ ++ E+ K+V L EEL +LE+S SRE VE + +L +
Sbjct: 591 MYEEQIKNLEKENYDVWAKVVRLNEELEKEKKKSAALEISLRNMERSREDVEKRNKALEE 650
Query: 188 KL 193
++
Sbjct: 651 EV 652
>BC051911-1|AAH51911.1| 757|Homo sapiens chromosome 13 open reading
frame 24 protein.
Length = 757
Score = 30.3 bits (65), Expect = 7.1
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +2
Query: 8 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKI 172
LM+Q++E R +Q + ++L E+ V NL+ E++EE+ + + ED++
Sbjct: 123 LMKQEMETILLRQKQLEETNLQLREKAGDVRRNLRDFELTEEQYIKLKAFPEDQL 177
>BC041806-1|AAH41806.1| 698|Homo sapiens C13orf24 protein protein.
Length = 698
Score = 30.3 bits (65), Expect = 7.1
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +2
Query: 8 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKI 172
LM+Q++E R +Q + ++L E+ V NL+ E++EE+ + + ED++
Sbjct: 123 LMKQEMETILLRQKQLEETNLQLREKAGDVRRNLRDFELTEEQYVKLKAFPEDQL 177
>BC006009-1|AAH06009.1| 414|Homo sapiens Unknown (protein for
IMAGE:4294615) protein.
Length = 414
Score = 30.3 bits (65), Expect = 7.1
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +2
Query: 8 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKI 172
LM+Q++E R +Q + ++L E+ V NL+ E++EE+ + + ED++
Sbjct: 123 LMKQEMETILLRQKQLEETNLQLREKAGDVRRNLRDFELTEEQYIKLKAFPEDQL 177
>AL391384-3|CAI15673.1| 757|Homo sapiens RP11-505F3.1 protein.
Length = 757
Score = 30.3 bits (65), Expect = 7.1
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +2
Query: 8 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKI 172
LM+Q++E R +Q + ++L E+ V NL+ E++EE+ + + ED++
Sbjct: 123 LMKQEMETILLRQKQLEETNLQLREKAGDVRRNLRDFELTEEQYIKLKAFPEDQL 177
>AL354720-1|CAI14869.1| 757|Homo sapiens RP11-505F3.1 protein.
Length = 757
Score = 30.3 bits (65), Expect = 7.1
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +2
Query: 8 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKI 172
LM+Q++E R +Q + ++L E+ V NL+ E++EE+ + + ED++
Sbjct: 123 LMKQEMETILLRQKQLEETNLQLREKAGDVRRNLRDFELTEEQYIKLKAFPEDQL 177
>AF330046-1|AAL37481.1| 757|Homo sapiens progesterone-induced
blocking factor 1 protein.
Length = 757
Score = 30.3 bits (65), Expect = 7.1
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +2
Query: 8 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKI 172
LM+Q++E R +Q + ++L E+ V NL+ E++EE+ + + ED++
Sbjct: 123 LMKQEMETILLRQKQLEETNLQLREKAGDVRRNLRDFELTEEQYIKLKAFPEDQL 177
>AF036943-1|AAF14051.1| 1192|Homo sapiens myelin transcription factor
1-like protein.
Length = 1192
Score = 30.3 bits (65), Expect = 7.1
Identities = 12/61 (19%), Positives = 33/61 (54%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQK 190
++++++ E Q + +++L ++ + +NLK++E + E + ++ +LSQ
Sbjct: 1068 LDEEIKELNESNSQMEADMIKLRTQITTMESNLKTIEEENKVVEQQNESLLHELANLSQS 1127
Query: 191 L 193
L
Sbjct: 1128 L 1128
>AC097495-2|AAY15074.1| 558|Homo sapiens unknown protein.
Length = 558
Score = 30.3 bits (65), Expect = 7.1
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +2
Query: 8 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQ 187
+ E+ ++ E+ K+V L EEL +LE+S SRE VE + +L +
Sbjct: 483 MYEEQIKNLEKENYDVWAKVVRLNEELEKEKKKSAALEISLRNMERSREDVEKRNKALEE 542
Query: 188 KL 193
++
Sbjct: 543 EV 544
>AB209996-1|BAE06078.1| 2585|Homo sapiens CENPE variant protein
protein.
Length = 2585
Score = 30.3 bits (65), Expect = 7.1
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQK 190
M++DLE + + + D KI +EELR+ +LK + + +K DK+ ++ +
Sbjct: 1734 MQKDLEHSNDALKAQDLKI---QEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKD 1790
Query: 191 L 193
L
Sbjct: 1791 L 1791
>X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein.
Length = 3259
Score = 29.9 bits (64), Expect = 9.3
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Frame = +2
Query: 8 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEV-------SEEKAMASREHVED 166
+M + E AEER + +VE+E++L +V K L S SR+H +
Sbjct: 2693 IMRNETETAEERVAELARDLVEMEQKLLMVTKENKGLTAQIQSFGRSMSSLQNSRDHANE 2752
Query: 167 KIHSLSQK 190
++ L +K
Sbjct: 2753 ELDELKRK 2760
>D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 protein.
Length = 3225
Score = 29.9 bits (64), Expect = 9.3
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Frame = +2
Query: 8 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEV-------SEEKAMASREHVED 166
+M + E AEER + +VE+E++L +V K L S SR+H +
Sbjct: 2659 IMRNETETAEERVAELARDLVEMEQKLLMVTKENKGLTAQIQSFGRSMSSLQNSRDHANE 2718
Query: 167 KIHSLSQK 190
++ L +K
Sbjct: 2719 ELDELKRK 2726
>BC150281-1|AAI50282.1| 1132|Homo sapiens MYT1L protein protein.
Length = 1132
Score = 29.9 bits (64), Expect = 9.3
Identities = 12/61 (19%), Positives = 33/61 (54%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQK 190
++++++ E Q + +++L ++ + +NLK++E + E + ++ +LSQ
Sbjct: 1014 LDEEIKELNESNSQMEADMIKLRTQITTMESNLKTIEEENKVIEQQNESLLHELANLSQS 1073
Query: 191 L 193
L
Sbjct: 1074 L 1074
>BC035251-1|AAH35251.1| 1031|Homo sapiens coiled-coil domain
containing 40 protein.
Length = 1031
Score = 29.9 bits (64), Expect = 9.3
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVE 163
L +MEQ R + EQ + E+E ++ + N+LK L + K S E +E
Sbjct: 805 LHIMEQKKLRVGSKIEQEKKEQKEIEHHMKDLDNDLKKLNMLMNKNRCSSEELE 858
>AB029029-1|BAA83058.2| 1154|Homo sapiens KIAA1106 protein protein.
Length = 1154
Score = 29.9 bits (64), Expect = 9.3
Identities = 12/61 (19%), Positives = 33/61 (54%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQK 190
++++++ E Q + +++L ++ + +NLK++E + E + ++ +LSQ
Sbjct: 1036 LDEEIKELNESNSQMEADMIKLRTQITTMESNLKTIEEENKVIEQQNESLLHELANLSQS 1095
Query: 191 L 193
L
Sbjct: 1096 L 1096
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,988,199
Number of Sequences: 237096
Number of extensions: 2050482
Number of successful extensions: 7274
Number of sequences better than 10.0: 118
Number of HSP's better than 10.0 without gapping: 6539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7230
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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