Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30278
(709 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. 96 3e-20
D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. 96 3e-20
AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical ... 96 3e-20
AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical ... 96 3e-20
AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical ... 96 3e-20
AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin i... 96 3e-20
D38542-1|BAA07545.1| 256|Caenorhabditis elegans CeTMIII protein. 95 3e-20
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 95 3e-20
D38539-3|BAA07542.1| 256|Caenorhabditis elegans CeTMIII protein. 95 3e-20
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 95 3e-20
AL132877-5|CAD45604.1| 256|Caenorhabditis elegans Hypothetical ... 95 3e-20
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 95 3e-20
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 33 0.26
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 33 0.26
Z75955-8|CAB00122.1| 410|Caenorhabditis elegans Hypothetical pr... 32 0.35
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 32 0.35
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 32 0.35
AC084152-1|AAM69074.2| 332|Caenorhabditis elegans Hypothetical ... 31 1.1
U70848-4|AAB09108.1| 869|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 29 2.5
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 29 2.5
AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical ... 29 3.3
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF067622-2|AAK68367.1| 651|Caenorhabditis elegans Hypothetical ... 29 4.3
Z81509-2|CAB04155.1| 239|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 28 5.7
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 28 5.7
U41027-4|AAC48196.2| 455|Caenorhabditis elegans Hypothetical pr... 28 5.7
U41027-3|AAQ82846.1| 516|Caenorhabditis elegans Hypothetical pr... 28 5.7
U39849-8|AAA81050.1| 479|Caenorhabditis elegans Hypothetical pr... 28 7.5
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 28 7.5
AL132876-14|CAD21666.1| 486|Caenorhabditis elegans Hypothetical... 27 9.9
AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin f... 27 9.9
AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin f... 27 9.9
AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical ... 27 9.9
AC024843-8|AAM48560.1| 726|Caenorhabditis elegans Hypothetical ... 27 9.9
AC024843-7|AAF60843.2| 743|Caenorhabditis elegans Hypothetical ... 27 9.9
>D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 95.9 bits (228), Expect = 3e-20
Identities = 51/91 (56%), Positives = 63/91 (69%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
L ++E DLERAEERAE + KIVELEEELRVVGNNLKSLEVSEEKA+ + E++I ++
Sbjct: 169 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQIRTV 228
Query: 182 SQKLXXXXXXXXXXXXSVQKLQKEAIGLKTI 274
S +L SVQKLQKE L+ +
Sbjct: 229 SSRLKEAETRAEFAERSVQKLQKEVDRLEEL 259
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASRE 154
+ L+E++LERAEER + + K LEE V + + +V E +++ E
Sbjct: 92 MTLLEEELERAEERLKIATEK---LEEATHNVDESERVRKVMENRSLQDEE 139
>D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 95.9 bits (228), Expect = 3e-20
Identities = 51/91 (56%), Positives = 63/91 (69%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
L ++E DLERAEERAE + KIVELEEELRVVGNNLKSLEVSEEKA+ + E++I ++
Sbjct: 169 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQIRTV 228
Query: 182 SQKLXXXXXXXXXXXXSVQKLQKEAIGLKTI 274
S +L SVQKLQKE L+ +
Sbjct: 229 SSRLKEAETRAEFAERSVQKLQKEVDRLEEL 259
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASRE 154
+ L+E++LERAEER + + K LEE V + + +V E +++ E
Sbjct: 92 MTLLEEELERAEERLKIATEK---LEEATHNVDESERVRKVMENRSLQDEE 139
>AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1d protein.
Length = 284
Score = 95.9 bits (228), Expect = 3e-20
Identities = 51/91 (56%), Positives = 63/91 (69%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
L ++E DLERAEERAE + KIVELEEELRVVGNNLKSLEVSEEKA+ + E++I ++
Sbjct: 169 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQIRTV 228
Query: 182 SQKLXXXXXXXXXXXXSVQKLQKEAIGLKTI 274
S +L SVQKLQKE L+ +
Sbjct: 229 SSRLKEAETRAEFAERSVQKLQKEVDRLEEL 259
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASRE 154
+ L+E++LERAEER + + K LEE V + + +V E +++ E
Sbjct: 92 MTLLEEELERAEERLKIATEK---LEEATHNVDESERVRKVMENRSLQDEE 139
>AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8B.1c protein.
Length = 256
Score = 95.9 bits (228), Expect = 3e-20
Identities = 51/91 (56%), Positives = 63/91 (69%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
L ++E DLERAEERAE + KIVELEEELRVVGNNLKSLEVSEEKA+ + E++I ++
Sbjct: 141 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQIRTV 200
Query: 182 SQKLXXXXXXXXXXXXSVQKLQKEAIGLKTI 274
S +L SVQKLQKE L+ +
Sbjct: 201 SSRLKEAETRAEFAERSVQKLQKEVDRLEEL 231
>AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical
protein Y105E8B.1b protein.
Length = 193
Score = 95.9 bits (228), Expect = 3e-20
Identities = 51/91 (56%), Positives = 63/91 (69%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
L ++E DLERAEERAE + KIVELEEELRVVGNNLKSLEVSEEKA+ + E++I ++
Sbjct: 78 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQIRTV 137
Query: 182 SQKLXXXXXXXXXXXXSVQKLQKEAIGLKTI 274
S +L SVQKLQKE L+ +
Sbjct: 138 SSRLKEAETRAEFAERSVQKLQKEVDRLEEL 168
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASRE 154
+ L+E++LERAEER + + K LEE V + + +V E +++ E
Sbjct: 1 MTLLEEELERAEERLKIATEK---LEEATHNVDESERVRKVMENRSLQDEE 48
>AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin
isoform IV protein.
Length = 256
Score = 95.9 bits (228), Expect = 3e-20
Identities = 51/91 (56%), Positives = 63/91 (69%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
L ++E DLERAEERAE + KIVELEEELRVVGNNLKSLEVSEEKA+ + E++I ++
Sbjct: 141 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQIRTV 200
Query: 182 SQKLXXXXXXXXXXXXSVQKLQKEAIGLKTI 274
S +L SVQKLQKE L+ +
Sbjct: 201 SSRLKEAETRAEFAERSVQKLQKEVDRLEEL 231
>D38542-1|BAA07545.1| 256|Caenorhabditis elegans CeTMIII protein.
Length = 256
Score = 95.5 bits (227), Expect = 3e-20
Identities = 50/84 (59%), Positives = 60/84 (71%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
L ++E DLERAEERAE + KIVELEEELRVVGNNLKSLEVSEEKA+ + E++I ++
Sbjct: 141 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQIRTV 200
Query: 182 SQKLXXXXXXXXXXXXSVQKLQKE 253
S +L SVQKLQKE
Sbjct: 201 SSRLKEAETRAEFAERSVQKLQKE 224
Score = 35.5 bits (78), Expect = 0.038
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +1
Query: 256 DRLEDDLVAEREKSKLLQEEMEATLHDIQ 342
DRLED+L+ E+E+ + L EE+E T+ +IQ
Sbjct: 226 DRLEDELLLEKERVRNLTEEIEQTVQEIQ 254
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKI 172
+VL+E+DLER E+R + + K+ + + KS+E ++ +E ++
Sbjct: 64 IVLVEEDLERTEDRLKTATSKLEQATKAADEADRARKSMETRSQQDEERANFLETQV 120
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 95.5 bits (227), Expect = 3e-20
Identities = 50/84 (59%), Positives = 60/84 (71%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
L ++E DLERAEERAE + KIVELEEELRVVGNNLKSLEVSEEKA+ + E++I ++
Sbjct: 169 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQIRTV 228
Query: 182 SQKLXXXXXXXXXXXXSVQKLQKE 253
S +L SVQKLQKE
Sbjct: 229 SSRLKEAETRAEFAERSVQKLQKE 252
Score = 34.7 bits (76), Expect = 0.066
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +1
Query: 256 DRLEDDLVAEREKSKLLQEEMEATLHDI 339
DRLED+LV E+E+ K + EE+++T ++
Sbjct: 254 DRLEDELVHEKERYKTISEELDSTFQEL 281
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASRE 154
+ L+E++LERAEER + + K LEE V + + +V E +++ E
Sbjct: 92 MTLLEEELERAEERLKIATEK---LEEATHNVDESERVRKVMENRSLQDEE 139
>D38539-3|BAA07542.1| 256|Caenorhabditis elegans CeTMIII protein.
Length = 256
Score = 95.5 bits (227), Expect = 3e-20
Identities = 50/84 (59%), Positives = 60/84 (71%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
L ++E DLERAEERAE + KIVELEEELRVVGNNLKSLEVSEEKA+ + E++I ++
Sbjct: 141 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQIRTV 200
Query: 182 SQKLXXXXXXXXXXXXSVQKLQKE 253
S +L SVQKLQKE
Sbjct: 201 SSRLKEAETRAEFAERSVQKLQKE 224
Score = 35.5 bits (78), Expect = 0.038
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +1
Query: 256 DRLEDDLVAEREKSKLLQEEMEATLHDIQ 342
DRLED+L+ E+E+ + L EE+E T+ +IQ
Sbjct: 226 DRLEDELLLEKERVRNLTEEIEQTVQEIQ 254
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKI 172
+VL+E+DLER E+R + + K+ + + KS+E ++ +E ++
Sbjct: 64 IVLVEEDLERTEDRLKTATSKLEQATKAADEADRARKSMETRSQQDEERANFLETQV 120
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 95.5 bits (227), Expect = 3e-20
Identities = 50/84 (59%), Positives = 60/84 (71%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
L ++E DLERAEERAE + KIVELEEELRVVGNNLKSLEVSEEKA+ + E++I ++
Sbjct: 169 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQIRTV 228
Query: 182 SQKLXXXXXXXXXXXXSVQKLQKE 253
S +L SVQKLQKE
Sbjct: 229 SSRLKEAETRAEFAERSVQKLQKE 252
Score = 33.5 bits (73), Expect = 0.15
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +1
Query: 256 DRLEDDLVAEREKSKLLQEEMEATLHDI 339
DRLED+LV E+E+ K + EE+++ L ++
Sbjct: 254 DRLEDELVHEKERYKTISEELDSNLPEL 281
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASRE 154
+ L+E++LERAEER + + K LEE V + + +V E +++ E
Sbjct: 92 MTLLEEELERAEERLKIATEK---LEEATHNVDESERVRKVMENRSLQDEE 139
>AL132877-5|CAD45604.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8B.1e protein.
Length = 256
Score = 95.5 bits (227), Expect = 3e-20
Identities = 50/84 (59%), Positives = 60/84 (71%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
L ++E DLERAEERAE + KIVELEEELRVVGNNLKSLEVSEEKA+ + E++I ++
Sbjct: 141 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQIRTV 200
Query: 182 SQKLXXXXXXXXXXXXSVQKLQKE 253
S +L SVQKLQKE
Sbjct: 201 SSRLKEAETRAEFAERSVQKLQKE 224
Score = 35.5 bits (78), Expect = 0.038
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +1
Query: 256 DRLEDDLVAEREKSKLLQEEMEATLHDIQ 342
DRLED+L+ E+E+ + L EE+E T+ +IQ
Sbjct: 226 DRLEDELLLEKERVRNLTEEIEQTVQEIQ 254
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKI 172
+VL+E+DLER E+R + + K+ + + KS+E ++ +E ++
Sbjct: 64 IVLVEEDLERTEDRLKTATSKLEQATKAADEADRARKSMETRSQQDEERANFLETQV 120
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 95.5 bits (227), Expect = 3e-20
Identities = 50/84 (59%), Positives = 60/84 (71%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSL 181
L ++E DLERAEERAE + KIVELEEELRVVGNNLKSLEVSEEKA+ + E++I ++
Sbjct: 169 LAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYEEQIRTV 228
Query: 182 SQKLXXXXXXXXXXXXSVQKLQKE 253
S +L SVQKLQKE
Sbjct: 229 SSRLKEAETRAEFAERSVQKLQKE 252
Score = 34.7 bits (76), Expect = 0.066
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +1
Query: 256 DRLEDDLVAEREKSKLLQEEMEATLHDI 339
DRLED+LV E+E+ K + EE+++T ++
Sbjct: 254 DRLEDELVHEKERYKTISEELDSTFQEL 281
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASRE 154
+ L+E++LERAEER + + K LEE V + + +V E +++ E
Sbjct: 92 MTLLEEELERAEERLKIATEK---LEEATHNVDESERVRKVMENRSLQDEE 139
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 32.7 bits (71), Expect = 0.26
Identities = 20/49 (40%), Positives = 25/49 (51%)
Frame = -3
Query: 158 RARETPSPSPLRLPEISGCYQRHGAPPQAQRFCNRFVRRVPPPSLGPAP 12
RARE + +PL P +S + H P Q F N V +PPP PAP
Sbjct: 276 RAREKSASNPLSSPTMSRP-RIHFLHPAYQSFTNDSVSPLPPPPPEPAP 323
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 32.7 bits (71), Expect = 0.26
Identities = 20/49 (40%), Positives = 25/49 (51%)
Frame = -3
Query: 158 RARETPSPSPLRLPEISGCYQRHGAPPQAQRFCNRFVRRVPPPSLGPAP 12
RARE + +PL P +S + H P Q F N V +PPP PAP
Sbjct: 290 RAREKSASNPLSSPTMSRP-RIHFLHPAYQSFTNDSVSPLPPPPPEPAP 337
>Z75955-8|CAB00122.1| 410|Caenorhabditis elegans Hypothetical
protein R07B7.13 protein.
Length = 410
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/29 (51%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Frame = +1
Query: 223 RAFRAETAKGGDRLEDDLVAERE-KSKLL 306
RA RAE + GG L+D+L+A+RE +SK++
Sbjct: 113 RAIRAEISSGGKILKDELIAKREPRSKIM 141
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +2
Query: 26 ERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQ 187
E+ +ER EQ + +L E ++ K LE SEE+ +A+R +++ L +
Sbjct: 109 EKEQEREEQLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEE 162
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +2
Query: 26 ERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQ 187
E+ +ER EQ + +L E ++ K LE SEE+ +A+R +++ L +
Sbjct: 109 EKEQEREEQLAKAMEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEE 162
>AC084152-1|AAM69074.2| 332|Caenorhabditis elegans Hypothetical
protein Y102A11A.9 protein.
Length = 332
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/81 (25%), Positives = 40/81 (49%)
Frame = +2
Query: 8 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQ 187
++E++ ++ EE +QS+ +E+ +++ L SL+ E R+ E KI LSQ
Sbjct: 228 MLEKNKKKGEEFIKQSENSKAVVEKTVQI-STVLDSLQKEREDLSEIRKKNEQKIEGLSQ 286
Query: 188 KLXXXXXXXXXXXXSVQKLQK 250
+L + +KLQ+
Sbjct: 287 ELIEAYGEIDALKMNNEKLQE 307
>U70848-4|AAB09108.1| 869|Caenorhabditis elegans Hypothetical
protein C43G2.2 protein.
Length = 869
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Frame = +2
Query: 8 LMEQDLERAEE---RAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHS 178
L+E+ + EE R + + + + E+EL L+S+E K + S +ED+
Sbjct: 90 LLEESSAKEEEYLQRIAKLEADLKKKEQELAEKKEELESIEKKHSKEIDSGAALEDERRK 149
Query: 179 LSQKLXXXXXXXXXXXXSVQKLQKEAIGL-KTI 274
L +L +L++E IGL KT+
Sbjct: 150 LRAELKETKEREQRLISEYSELEEENIGLQKTV 182
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/52 (40%), Positives = 26/52 (50%)
Frame = +2
Query: 32 AEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQ 187
+E R EQ +I EL E NNL E+ EEKA+ R+ E K L Q
Sbjct: 1848 SESRIEQLQGRIDELIRER----NNLVKEEIKEEKALMERQINEMKAKHLQQ 1895
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/52 (40%), Positives = 26/52 (50%)
Frame = +2
Query: 32 AEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQ 187
+E R EQ +I EL E NNL E+ EEKA+ R+ E K L Q
Sbjct: 1848 SESRIEQLQGRIDELIRER----NNLVKEEIKEEKALMERQINEMKAKHLQQ 1895
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDK 169
+E+D ++ E+R E + K + EE+++ K + EEK A R E+K
Sbjct: 144 LEEDKKKEEKRKEAEEKKKKDEEEKMKKDEERNKRKKEEEEKKEAKRREDEEK 196
>AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical
protein K10G6.4 protein.
Length = 455
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +2
Query: 35 EERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREH---VEDKIHSLSQKL 193
E+ EQ D KI +L +L +SLE ++ EH +E ++ SL +KL
Sbjct: 305 EKLCEQKDLKIEDLHSQLEKCDRLQESLEKADRSRQIEEEHRERLELEVKSLYEKL 360
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -3
Query: 161 RRARETPSPSPLRLPEISGCYQRHGAPPQAQRFCNRFVRRVPPPSLGPAP 12
RR + TP P P R + C G PP C ++ + PPP P P
Sbjct: 86 RRPQPTPGPPPPR----NNCLPPPGPPPP----CQQYQQPQPPPCQRPQP 127
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -3
Query: 161 RRARETPSPSPLRLPEISGCYQRHGAPPQAQRFCNRFVRRVPPPSLGPAP 12
RR + TP P P R + C G PP C ++ + PPP P P
Sbjct: 86 RRPQPTPGPPPPR----NNCLPPPGPPPP----CQQYQQPQPPPCQRPQP 127
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -3
Query: 161 RRARETPSPSPLRLPEISGCYQRHGAPPQAQRFCNRFVRRVPPPSLGPAP 12
RR + TP P P R + C G PP C ++ + PPP P P
Sbjct: 86 RRPQPTPGPPPPR----NNCLPPPGPPPP----CQQYQQPQPPPCQRPQP 127
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical
protein T28C6.9 protein.
Length = 1861
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Frame = +2
Query: 2 LVLMEQDLERAEERAEQSDC-KIVELEEELRVVGNNLK----SLEVSEEKAMASREHVED 166
L +++QD ++ + D K++EL++EL + LK SL + ++ RE +ED
Sbjct: 659 LEILQQDQQQTLLHSVSQDMNKLIELKDELEIAVQALKAEIWSLNGQLKASILDREGLED 718
Query: 167 KIHSL 181
K+ L
Sbjct: 719 KVTQL 723
>AF067622-2|AAK68367.1| 651|Caenorhabditis elegans Hypothetical
protein F33E11.3 protein.
Length = 651
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/61 (24%), Positives = 34/61 (55%)
Frame = +2
Query: 8 LMEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLSQ 187
L E + + A E AE S+ +L +E+R + + +K + + + A + + +ED++ + +
Sbjct: 138 LAENERQHAVEMAEMSE----KLAKEMRKLEDEVKRMRMRTKAAAVATKPLEDELEKIEE 193
Query: 188 K 190
K
Sbjct: 194 K 194
>Z81509-2|CAB04155.1| 239|Caenorhabditis elegans Hypothetical
protein F21A3.4 protein.
Length = 239
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSL--EVSEEKAMASRE 154
++ D +R EE+ E + K E+E+ + ++ KSL V EEK M +
Sbjct: 151 LKLDCDREEEKCEYWNDKSAEIEKVVEMLKEQRKSLGERVEEEKRMEQEQ 200
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = -1
Query: 340 GCRGAWPPSPPAGVCSFRARPP---DRLQAYRLLLQFLHGTLGELGTC 206
GC A PP PP C A PP R + RL L L G G C
Sbjct: 26 GCGCAPPPPPPPCGCGAPALPPLQLPRFELPRLSLPSLGGGCGGPAPC 73
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = -1
Query: 340 GCRGAWPPSPPAGVCSFRARPP---DRLQAYRLLLQFLHGTLGELGTC 206
GC A PP PP C A PP R + RL L L G G C
Sbjct: 26 GCGCAPPPPPPPCGCGAPALPPLQLPRFELPRLSLPSLGGGCGGPAPC 73
>U41027-4|AAC48196.2| 455|Caenorhabditis elegans Hypothetical
protein R08E3.3a protein.
Length = 455
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKA 139
ME DLE +ER E + +L ++L + ++++S+ V E+++
Sbjct: 336 MEADLEGVDERIESNVMLAEKLRKKLSKIDDDVQSMYVLEQRS 378
>U41027-3|AAQ82846.1| 516|Caenorhabditis elegans Hypothetical
protein R08E3.3b protein.
Length = 516
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +2
Query: 11 MEQDLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKA 139
ME DLE +ER E + +L ++L + ++++S+ V E+++
Sbjct: 336 MEADLEGVDERIESNVMLAEKLRKKLSKIDDDVQSMYVLEQRS 378
>U39849-8|AAA81050.1| 479|Caenorhabditis elegans Hypothetical
protein C06A8.5 protein.
Length = 479
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 20 DLERAEERAEQSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVED 166
D+ER ++ Q D + E+E++L+ G S EE+A E + D
Sbjct: 13 DVERLKKILRQKDEMLEEMEDDLKNQGKPCSSKLSLEERAQELSEQLRD 61
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = -1
Query: 421 FSATLSD*LRNGEAERASEGSAVFTYSGCRGAWPPSPPAGVCSFRARPP 275
+SA + R G V+ G +PP PP G ++R PP
Sbjct: 67 WSANRDEQWRGPPGPSGPSGPPVYHNQGPPRGYPPPPPQGADTWRGAPP 115
>AL132876-14|CAD21666.1| 486|Caenorhabditis elegans Hypothetical
protein Y105E8A.17 protein.
Length = 486
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 265 EDDLVAEREKSKLLQEEMEATLHDIQNM 348
E+DL AE + +L ++E E HD+Q +
Sbjct: 224 EEDLTAELRRIELRKKEREKKAHDLQKL 251
>AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin
family protein 14,isoform a protein.
Length = 427
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = -3
Query: 164 PRRARETPSPSPLRLPEISGCYQRHGAPPQAQRFCNRFVRRVPPPSLGPAP 12
PR+ S SP R P+ +G A+R R PP + GPAP
Sbjct: 355 PRKKSRNASSSPTRKPKSAGVENA-----AARRKRTATTTRTPPAAAGPAP 400
>AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin
family protein 14,isoform b protein.
Length = 451
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = -3
Query: 164 PRRARETPSPSPLRLPEISGCYQRHGAPPQAQRFCNRFVRRVPPPSLGPAP 12
PR+ S SP R P+ +G A+R R PP + GPAP
Sbjct: 379 PRKKSRNASSSPTRKPKSAGVENA-----AARRKRTATTTRTPPAAAGPAP 424
>AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical
protein F52G3.1 protein.
Length = 1172
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = -3
Query: 161 RRARETPSPSPLRLPEISGCYQRHGAPPQAQRFCNRFVRRVPPPSLGPAP 12
+ A+ + P+P++ P+ ++ G + ++ + VPPP+ GPAP
Sbjct: 343 QEAKTSHPPAPVKPPKEKKL-RKEGKSSKKEKDVKEKKQTVPPPNPGPAP 391
>AC024843-8|AAM48560.1| 726|Caenorhabditis elegans Hypothetical
protein Y61A9LA.3c protein.
Length = 726
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/63 (23%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 8 LMEQDLERAEERAE-QSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLS 184
++E++ R + AE + ++++ EE+ +K E ++KAM +++ VED + +
Sbjct: 457 ILEEERARIQGEAEREKKLELMKAEEQKYQKEKEMKEFEEQQKKAMMTKQ-VEDDFNVMV 515
Query: 185 QKL 193
++L
Sbjct: 516 EQL 518
>AC024843-7|AAF60843.2| 743|Caenorhabditis elegans Hypothetical
protein Y61A9LA.3a protein.
Length = 743
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/63 (23%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 8 LMEQDLERAEERAE-QSDCKIVELEEELRVVGNNLKSLEVSEEKAMASREHVEDKIHSLS 184
++E++ R + AE + ++++ EE+ +K E ++KAM +++ VED + +
Sbjct: 457 ILEEERARIQGEAEREKKLELMKAEEQKYQKEKEMKEFEEQQKKAMMTKQ-VEDDFNVMV 515
Query: 185 QKL 193
++L
Sbjct: 516 EQL 518
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,703,861
Number of Sequences: 27780
Number of extensions: 303772
Number of successful extensions: 1154
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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