Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30276
         (639 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    24   1.2  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   2.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   2.8  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   3.8  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   6.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   6.6  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   8.7  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +3

Query: 366 LHHRRTGHHLSRVRQAEAHVNTPVSLQR 449
           LHH    HHL +        N P S+ R
Sbjct: 347 LHHNPMSHHLKQEPSGFTSSNHPFSINR 374


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 500 SYINCIACEGWSDARAEALKRD 435
           +YI+CI  +G      E LKRD
Sbjct: 42  NYIDCILGKGKCTPEGEELKRD 63


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 7/34 (20%)
 Frame = +2

Query: 137 FTCTNCNTS------LAGQRFTSRDEKPY-CAEC 217
           FTC  CN S      L     T   EKP+ C EC
Sbjct: 135 FTCEVCNRSFGYKHVLQNHERTHTGEKPFECQEC 168


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 299 SNEMKRVPPIPVMGLCKKCS 240
           ++E+KRV P  +   C KCS
Sbjct: 55  ADELKRVLPDALKSDCAKCS 74


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 6/41 (14%)
 Frame = +2

Query: 137 FTCTNCNT------SLAGQRFTSRDEKPYCAECFGELFAKR 241
           F C  CN       +L     T  DE+PY  +  G+ F ++
Sbjct: 80  FICKYCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQ 120


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 152 CNTSLAGQRFTSRDE 196
           CN    G+RFT  DE
Sbjct: 347 CNWLFCGKRFTRSDE 361


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 327 HLRAVQDLARRQGLHHRRT 383
           HLR V D ++R+G +  RT
Sbjct: 350 HLRKVGDPSKRKGTYAFRT 368


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,202
Number of Sequences: 336
Number of extensions: 2602
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)