Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30276
(639 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0992 + 25083397-25083537,25084198-25084228,25084971-250851... 48 6e-06
06_01_0579 + 4099039-4099086,4099798-4099848,4100151-4100286,410... 45 4e-05
12_02_0498 + 19721038-19721178,19721376-19721472,19721576-197216... 40 0.001
10_08_0547 - 18682357-18682683,18682971-18683060,18683279-186833... 40 0.002
03_02_0476 + 8768182-8768313,8768734-8768833,8768949-8768986,876... 39 0.003
04_04_0611 - 26594737-26594991,26595307-26595396,26595490-265955... 39 0.004
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 37 0.012
02_05_0094 - 25758213-25758479,25758886-25758975,25759090-257591... 37 0.012
08_02_1221 - 25371247-25371387,25371472-25372385,25372675-25373350 31 0.58
03_05_0383 + 23656041-23656096,23657189-23657255,23657599-236577... 31 0.58
12_01_0796 + 7292523-7292783,7292963-7293018,7295274-7295331,729... 31 0.77
07_01_0611 + 4524866-4525047,4525406-4525468,4525701-4525761,452... 31 0.77
03_02_0490 - 8840577-8840914,8841009-8841067,8841168-8841283,884... 31 0.77
08_02_1406 - 26854845-26855606 30 1.3
06_01_0847 - 6451525-6451678,6452870-6453066,6454300-6454591,645... 30 1.8
02_05_0347 - 28155272-28155437,28155518-28155792 30 1.8
07_01_1105 - 10173039-10173156,10173715-10173716,10174550-101745... 29 2.4
03_06_0658 - 35335639-35335731,35335814-35335871,35336213-353363... 29 3.1
07_01_0565 + 4188387-4190570 29 4.1
01_06_1748 + 39632040-39632065,39632748-39633051,39633147-396331... 28 5.4
01_05_0529 + 22982859-22983041,22983146-22983597,22983598-22983892 28 5.4
05_06_0071 + 25355853-25356095,25356183-25356239,25356848-253570... 28 7.2
04_01_0148 + 1710369-1710531,1711821-1712279,1712769-1712915,171... 28 7.2
03_01_0014 + 113638-113754,113836-113950,114570-114835,115365-11... 28 7.2
02_05_0748 - 31463559-31464764 28 7.2
02_05_0220 - 26885502-26885561,26885940-26886739,26887055-268874... 28 7.2
09_04_0683 - 19431034-19431495,19431632-19431997,19432055-194323... 27 9.5
07_01_0427 + 3255857-3255922,3257061-3257180,3257382-3257403,325... 27 9.5
05_03_0682 - 16916437-16916686,16916761-16916822,16917082-169171... 27 9.5
04_04_1693 + 35404336-35404515,35405732-35406019,35406189-354062... 27 9.5
04_04_0751 - 27769616-27769684,27769795-27769917,27769998-277707... 27 9.5
02_05_0908 + 32668706-32669140,32669772-32669957,32670316-326704... 27 9.5
01_01_0987 + 7803281-7803910,7803989-7804510 27 9.5
>12_02_0992 +
25083397-25083537,25084198-25084228,25084971-25085139,
25085228-25085291,25085408-25085474,25086543-25086586,
25086835-25086922,25087079-25087238,25087659-25087779,
25087859-25087942,25088043-25088162,25088689-25088901,
25088995-25089054,25089144-25089262,25089407-25089465,
25089585-25089919
Length = 624
Score = 48.0 bits (109), Expect = 6e-06
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 65 CVKCNKIITQGG-VTYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELFAKR 241
C C I G ++ + WH +CF C CN ++ F +++PY C+ + F +
Sbjct: 257 CAGCKNPIGHGRFLSCMDSVWHPQCFRCFACNKPISEYEFAMHEDQPYHKSCYKDFFHPK 316
Query: 242 CTSC 253
C C
Sbjct: 317 CDVC 320
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1
Query: 271 IGGTRFISFEDRHWHNDCFICAQC 342
IG RF+S D WH CF C C
Sbjct: 264 IGHGRFLSCMDSVWHPQCFRCFAC 287
>06_01_0579 +
4099039-4099086,4099798-4099848,4100151-4100286,
4100287-4100401,4100496-4100528,4101037-4101166,
4101663-4101751,4102042-4102148,4102238-4102309,
4102384-4102764,4104907-4105064,4105581-4105674,
4106082-4106089,4106297-4106387,4107136-4107289,
4108257-4108377,4108468-4108551,4108946-4109065,
4109181-4109393,4109482-4109544,4109668-4109783,
4110132-4110190,4111126-4111445
Length = 920
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 65 CVKCNKIITQGG-VTYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELFAKR 241
C C+ I G ++ WH ECF C CN + F+ PY C+ E F +
Sbjct: 558 CAGCHSEIGHGRFLSCMGAVWHPECFRCHACNQPIYDYEFSMSGNHPYHKTCYKERFHPK 617
Query: 242 CTSC 253
C C
Sbjct: 618 CDVC 621
Score = 31.9 bits (69), Expect = 0.44
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +1
Query: 271 IGGTRFISFEDRHWHNDCFICAQCKTSLVGKGFITDGQDIICPECAKQK 417
IG RF+S WH +CF C C + F G C K++
Sbjct: 565 IGHGRFLSCMGAVWHPECFRCHACNQPIYDYEFSMSGNHPYHKTCYKER 613
>12_02_0498 +
19721038-19721178,19721376-19721472,19721576-19721619,
19722120-19722203,19722441-19722662
Length = 195
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 59 TRCVKCNKII-TQGGVTYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELFA 235
T+C+ C+K + +T N +H+ CF C +C +L + S + YC F +LF
Sbjct: 10 TKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFK 69
Query: 236 K 238
+
Sbjct: 70 R 70
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 62 RCVKCNKIITQ-GGVTYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYC 208
+CV CNK + VT N +H+ CF C + +++ + + + K YC
Sbjct: 109 KCVGCNKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYC 158
>10_08_0547 -
18682357-18682683,18682971-18683060,18683279-18683301,
18683397-18683496,18683615-18683749
Length = 224
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +2
Query: 62 RCVKCNKIITQGGV-TYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELFAK 238
+C C+K + + T + P+H+ CF C++C +L+ ++S D YC F +LF +
Sbjct: 9 KCNACDKTVHFIDLLTADSIPYHKSCFRCSHCKGTLSMCSYSSMDGVLYCKTHFEQLFKE 68
Query: 239 RCT 247
T
Sbjct: 69 TGT 71
Score = 37.1 bits (82), Expect = 0.012
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 62 RCVKCNKIITQ-GGVTYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELFAK 238
+C C K + +T + E +HR CF C + L + S + YC F +LF K
Sbjct: 103 KCTACKKTVYPLEKMTMEGECYHRTCFKCAHGGCLLTNASYASHNGILYCQNHFWQLFKK 162
>03_02_0476 +
8768182-8768313,8768734-8768833,8768949-8768986,
8769102-8769191,8769465-8769695
Length = 196
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 62 RCVKCNKII-TQGGVTYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELF 232
+C C K + ++ +HR CF C +C ++L+ ++S + PYC F +LF
Sbjct: 8 KCKVCTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTLSLGNYSSIEGVPYCKPHFEQLF 65
Score = 35.5 bits (78), Expect = 0.036
Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 62 RCVKCNKIITQ-GGVTYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELFAK 238
+C C+K VT + + +H+ CF C++ +++ + + + YC F +LF +
Sbjct: 107 KCATCSKTAYPLEKVTVEGQAYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKE 166
Query: 239 R 241
+
Sbjct: 167 K 167
>04_04_0611 -
26594737-26594991,26595307-26595396,26595490-26595515,
26595603-26595702,26595820-26595954
Length = 201
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 62 RCVKCNKIITQGGV-TYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELF 232
+C C+K + + T P+H+ CF C++C L+ ++S D YC F +LF
Sbjct: 9 KCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFEQLF 66
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 62 RCVKCNKIITQ-GGVTYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELFAK 238
+C C K + +T + E +H+ CF C++ L + + + YC FG+LF +
Sbjct: 104 KCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFME 163
Query: 239 R 241
+
Sbjct: 164 K 164
>06_01_0926 -
7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 62 RCVKCNKIITQ-GGVTYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELF 232
+CV CNK + V +H+ CF CT+ +L+ + + K YC +LF
Sbjct: 111 KCVVCNKTVYPLEKVNLNGSSYHKSCFRCTHGGCTLSPSNNVTHEGKLYCKTHHSQLF 168
Score = 32.3 bits (70), Expect = 0.33
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 122 WHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGEL 229
+HR CF CT+C +L ++S + YC + ++
Sbjct: 33 YHRPCFRCTHCKATLQFSNYSSVEGVLYCKPHYDQI 68
>02_05_0094 -
25758213-25758479,25758886-25758975,25759090-25759118,
25759208-25759307,25759411-25759545
Length = 206
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = +2
Query: 62 RCVKCNK------IITQGGVTYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFG 223
+C C+K ++T GV+Y H+ CF C++C +L+ ++S D YC F
Sbjct: 9 KCKACDKTVHFIDLLTADGVSY-----HKTCFKCSHCKGTLSMCNYSSMDGVLYCKTHFE 63
Query: 224 ELF 232
+LF
Sbjct: 64 QLF 66
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 62 RCVKCNKIITQ-GGVTYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELFAK 238
+C C K + +T + E +H+ CF C++ L + + + YC F +LF +
Sbjct: 105 KCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGILYCKIHFSQLFKE 164
Query: 239 R 241
+
Sbjct: 165 K 165
>08_02_1221 - 25371247-25371387,25371472-25372385,25372675-25373350
Length = 576
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/27 (59%), Positives = 16/27 (59%)
Frame = -1
Query: 288 EAGAADTCDGLVQEVQRLANSSPKHSA 208
EAG DT DGLV EV RL S P A
Sbjct: 7 EAGVFDTVDGLVGEVMRLHRSLPARPA 33
>03_05_0383 +
23656041-23656096,23657189-23657255,23657599-23657745,
23658094-23658178,23658380-23658551,23660056-23660176,
23660431-23660550,23660861-23661073,23661154-23661213,
23661306-23661424,23661609-23661667,23661798-23662132
Length = 517
Score = 31.5 bits (68), Expect = 0.58
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +1
Query: 265 TGIGGTRFISFEDRHWHNDCFICAQC 342
T IG RF+S D WH CF C C
Sbjct: 183 TPIGQGRFLSCMDSVWHPQCFRCFAC 208
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 65 CVKCNKIITQGG-VTYKNEPWHRECFTCTNCNTSLA 169
C C I QG ++ + WH +CF C C+ ++
Sbjct: 178 CAGCKTPIGQGRFLSCMDSVWHPQCFRCFACDRPIS 213
>12_01_0796 +
7292523-7292783,7292963-7293018,7295274-7295331,
7295777-7295843,7296461-7296516,7296638-7296691,
7296836-7296961
Length = 225
Score = 31.1 bits (67), Expect = 0.77
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +3
Query: 294 VRRQTLAQRLLHLRAVQDLARRQGLHHRRTGHHLSRVRQAE 416
V+ + L L HLR A R+G HH HH RVR+AE
Sbjct: 11 VQERRLGVLLSHLRPCAPPAARRGNHHHH--HHDLRVREAE 49
>07_01_0611 +
4524866-4525047,4525406-4525468,4525701-4525761,
4526212-4526304,4526372-4526489,4527003-4527105,
4527342-4527525,4527974-4528087
Length = 305
Score = 31.1 bits (67), Expect = 0.77
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Frame = -1
Query: 405 ALGTDDVLSVGDEALADERGLA----LRADEAVVVPV--SVFERDEAGAADTCDGLVQEV 244
ALG D++ V DE L DE GLA ++A E V ++++EA AA G ++
Sbjct: 185 ALGEDEMPDVKDETLPDEEGLARPVVVKAVEEFKASVYGENYDQEEAEAAAAKAGASKKR 244
Query: 243 QRLANSSPKHSA 208
+ L +++ + SA
Sbjct: 245 KALTDAAAEKSA 256
>03_02_0490 -
8840577-8840914,8841009-8841067,8841168-8841283,
8841578-8841640,8841826-8842038,8842211-8842330,
8842453-8842578,8842593-8842749,8842830-8842962,
8843054-8843138,8843305-8843421
Length = 508
Score = 31.1 bits (67), Expect = 0.77
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Frame = +2
Query: 29 CAGCYEDKFATRCVKCNKIITQGGVTYKNEPWHRECFTCTNCNTSL--AGQRFTSRDEKP 202
C G Y RC C I + VT+ + EC + + SL + +FT P
Sbjct: 129 CLGMYWHPQCFRCSSCRHPIREMEVTFLQ--FSLECLKVFSGSDSLLYSVSQFTLLGTDP 186
Query: 203 YCAECFGELFAKRCTSC 253
Y C+ EL +C C
Sbjct: 187 YHKLCYKELHHPKCDVC 203
Score = 28.3 bits (60), Expect = 5.4
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 271 IGGTRFISFEDRHWHNDCFICAQCK 345
IG ++S +WH CF C+ C+
Sbjct: 121 IGHGHYLSCLGMYWHPQCFRCSSCR 145
>08_02_1406 - 26854845-26855606
Length = 253
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = +2
Query: 62 RCVKCNKIITQGGVTYKN--EPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAEC 217
RCV+CN + GG + W +C TC + LA RD P C C
Sbjct: 154 RCVECNAVAGGGGGGGRQVVRAWSYQCQTCPDSELCLACA--LGRDGVPPCCCC 205
>06_01_0847 -
6451525-6451678,6452870-6453066,6454300-6454591,
6454622-6454654,6454869-6455102,6455204-6455259,
6455552-6456754
Length = 722
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = -1
Query: 456 SGSVEARQVYLHELLLGALGTDDVLSVGDEALADERGLALRADE---AVVVPVSVFERDE 286
+GS +VY ++LL+G G ++ + + + D+R AL DE A +P E DE
Sbjct: 289 TGSSTVPKVYFNDLLIG--GLTELKKMEESGILDDRTDALFKDEPSSAAPLPPLPGEDDE 346
Query: 285 AGAADTCDGLVQEVQRLANS 226
+G+ D L V+++ S
Sbjct: 347 SGSG-KIDELATIVRKMRES 365
>02_05_0347 - 28155272-28155437,28155518-28155792
Length = 146
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 116 EPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAE 214
E H CT C LAG F R + P+C+E
Sbjct: 68 EEAHHFLDECTLCRKGLAGDIFMYRGDTPFCSE 100
>07_01_1105 - 10173039-10173156,10173715-10173716,10174550-10174584,
10174696-10174765,10175163-10176707,10176770-10178062
Length = 1020
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = -2
Query: 482 ACEGWSDARAEALKRDRCIYMSFCLAHSGQMMSCPSVMKPLPTSEVLHCAQMKQSLCQCL 303
A E WS + E + Y+S + G++ P+ P + +C ++ Q LCQ +
Sbjct: 894 AWEEWSGVKDEHFPELK--YLS--IVRCGKLKVLPNFTSG-PKQRIRNCEKLLQPLCQNI 948
Query: 302 SSNEMKRVPP 273
N M+ +PP
Sbjct: 949 HWNLMEYIPP 958
>03_06_0658 -
35335639-35335731,35335814-35335871,35336213-35336355,
35336624-35336703,35336916-35337075,35337531-35337668,
35338487-35338567,35338640-35338693,35339192-35339297,
35339615-35339682,35340076-35340225,35340401-35340519,
35341151-35341362,35342118-35342205,35342365-35342479,
35343083-35343274,35343809-35344018
Length = 688
Score = 29.1 bits (62), Expect = 3.1
Identities = 21/53 (39%), Positives = 24/53 (45%)
Frame = +3
Query: 228 CSPSAALLAQAHHRYRRHPLHLVRRQTLAQRLLHLRAVQDLARRQGLHHRRTG 386
CSPS L + RR L L+ A LL L ARR+G HH R G
Sbjct: 5 CSPSPTLPTASLLLLRRRRLRLLHPPPSAAALLLLLP----ARRRGRHHHRRG 53
>07_01_0565 + 4188387-4190570
Length = 727
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 189 ATRSPTAPSASGNCSPSAALLAQAHHRYRRHPLHLVRRQTLAQRL 323
+T SP+A +A+ SP A L A HR++R +V T +R+
Sbjct: 78 STPSPSATAAARRLSPLARFLLDALHRHQRWGPPVVAELTKLRRV 122
>01_06_1748 +
39632040-39632065,39632748-39633051,39633147-39633192,
39633228-39633314,39634083-39634285
Length = 221
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = -1
Query: 393 DDVLSVGDEALADERGLALRADEAVVVPVSVFERDE 286
+D + G+E A+E G+ +D+ +VP V+++++
Sbjct: 184 EDDFNSGEEDEANEEGIDFESDKDEIVPTKVYDQED 219
>01_05_0529 + 22982859-22983041,22983146-22983597,22983598-22983892
Length = 309
Score = 28.3 bits (60), Expect = 5.4
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2
Query: 101 VTYKNEPWHRECFTCTNCNTSLAGQR 178
+ K+ PW +E TC +C + G R
Sbjct: 194 IASKHHPWRKESLTCCSCRYVIDGYR 219
>05_06_0071 +
25355853-25356095,25356183-25356239,25356848-25357069,
25357143-25357227,25357993-25358083,25358172-25358336,
25358583-25358699,25358773-25358848,25359940-25360102,
25360184-25361064
Length = 699
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 303 QTLAQRLLHLRAVQDLARRQGLHHRRTGHHLSRVRQAEAHVNTPVSLQRFRSRIAPS 473
+T R++ +V A + GL GH +S+ + + V++P S+ F AP+
Sbjct: 514 RTQNDRVVSANSVHRSAAQSGLLASTLGHPISQFTLSSSKVSSPSSVLMFNQATAPN 570
>04_01_0148 +
1710369-1710531,1711821-1712279,1712769-1712915,
1713004-1714170,1714378-1714430
Length = 662
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 386 SCPSVMKPLPTSEVLHCAQMKQSLCQCLSSNEMKRVPP 273
SC S+ P P + + C+ K+ L C S+ + +PP
Sbjct: 68 SCGSMSIPFPFALLSACSGSKRFLLNCTSNKTLIGIPP 105
>03_01_0014 +
113638-113754,113836-113950,114570-114835,115365-115575,
115915-115979,118723-118930,119457-119566,119663-119913,
120250-120356,120442-120509,120624-120701,121070-121198,
121341-121481,122297-122344,122648-122743,124071-124183,
124441-124591,124745-124818,124913-125072,125356-125454,
125532-125618,125761-125907
Length = 946
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Frame = +2
Query: 62 RCVKCNKIITQGGVTYKNEPWHRECFTCTN----CNTSL 166
RC +C +++ + +EPW F CT+ C T L
Sbjct: 44 RCSECGQVLPESYEPPADEPWTTGIFACTDDPQTCRTGL 82
>02_05_0748 - 31463559-31464764
Length = 401
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +1
Query: 313 HNDCFICAQCKTSLVGKGFITDGQDII 393
HN+CF+C+ ++ VG + G++I+
Sbjct: 143 HNECFMCSDKESLAVGTELLVFGKEIL 169
>02_05_0220 - 26885502-26885561,26885940-26886739,26887055-26887421,
26887942-26888055,26888132-26888228,26889115-26889235,
26889306-26889390,26889494-26889643,26889871-26889987,
26890123-26890221,26890439-26890495,26890581-26890664,
26890759-26890828,26891015-26891169,26891557-26892095,
26892327-26892393,26892436-26892984,26893574-26893768,
26894485-26894569,26895822-26896441,26897154-26897486,
26897552-26897616,26897868-26897955,26898250-26898331,
26898720-26898796,26899152-26899256,26899496-26899630,
26900199-26900888,26901474-26902261,26902990-26904673
Length = 2825
Score = 27.9 bits (59), Expect = 7.2
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Frame = +3
Query: 198 SPTAP--SASGNCSPS--AALLAQAHHRYRRHPLHLVRRQ----TLAQRLLHLRAVQDLA 353
+PT P SASG+ S S + +L + R P+H++R T L V +
Sbjct: 2612 TPTTPNDSASGDSSTSNSSKVLETSRRRRIEGPMHVLRGHLGEVTCCSVSSALGLVASSS 2671
Query: 354 RRQG--LHHRRTGHHLSRVRQAEAHV 425
G LH+ RTG + ++ + EAH+
Sbjct: 2672 STSGVLLHNLRTGRLIRKLDKQEAHL 2697
>09_04_0683 -
19431034-19431495,19431632-19431997,19432055-19432326,
19433621-19433686,19433924-19433978,19434509-19434577,
19435200-19435307,19435394-19435462,19435883-19436038,
19436089-19436229,19436514-19436568,19437103-19437233,
19437382-19437486
Length = 684
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 237 SAALLAQAHHRYRRHPLHLVRRQTLAQRLLHLRAVQDLARRQGL 368
S LLA A Y P HL R+T+A+ + + R +QD++ G+
Sbjct: 412 SIRLLAPAV--YAAIPAHLRNRRTVAEAMTNRRWIQDISSALGI 453
>07_01_0427 +
3255857-3255922,3257061-3257180,3257382-3257403,
3257978-3258026,3259119-3259190,3259993-3260068,
3260823-3260894
Length = 158
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -1
Query: 261 GLVQEVQRLANSSPKHSAQ*GFSSREVNRWPASDVLQF 148
GLV+E+QR+ S+P+ S + FS+ N W L F
Sbjct: 108 GLVEEIQRIKTSNPEISHREAFSAAAKN-WAHLPRLHF 144
>05_03_0682 - 16916437-16916686,16916761-16916822,16917082-16917147,
16917606-16917737,16917925-16918026,16918146-16918343,
16918409-16918555,16918804-16918914,16919661-16920194,
16920269-16920425,16920511-16920660,16920744-16920883,
16921668-16921784,16922759-16922932,16923020-16923187,
16923323-16923464,16923610-16923728,16924997-16925098,
16925618-16925701,16926843-16927142
Length = 1084
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -1
Query: 462 CESGSVEARQVYLHELLLGALGTDDVLSVGDEALADERGLALRADEAVVV 313
CE G + Q+Y+H L+ + D + +G + D L R E VV
Sbjct: 872 CEGGPLVTNQIYVHSKLM--IIDDRITLIGSANINDRSLLGSRDSEIAVV 919
>04_04_1693 +
35404336-35404515,35405732-35406019,35406189-35406278,
35406487-35406564,35406638-35406718,35407300-35407350,
35407788-35407933,35408169-35408235,35408328-35408387,
35408472-35408501,35408776-35408835,35408936-35409052,
35409790-35409903,35410068-35410166,35410572-35410697,
35410774-35410848,35410958-35411029,35411167-35411277,
35411760-35411843,35413149-35413256,35414207-35414308,
35414393-35414455,35414524-35414598,35414901-35414972,
35415063-35415187,35415251-35415302,35415380-35415448,
35415525-35415540,35415941-35415989,35416607-35417180
Length = 1077
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -2
Query: 503 LSYINCIACEGWSDARAEALKRD--RCIYMSFCLAHSGQMMSCPS 375
L++I C AC W++ ++E L + C+ +S M+ CP+
Sbjct: 854 LTFI-CQACASWNEIKSEGLLSESIMCVVLSTSECSQPIMLGCPT 897
>04_04_0751 - 27769616-27769684,27769795-27769917,27769998-27770770,
27771407-27771773,27772104-27772217,27772307-27772403,
27772968-27773088,27773168-27773252,27773349-27773498,
27773630-27773746,27773819-27773905,27773981-27774049,
27774125-27774181,27774266-27774349,27774477-27774513,
27774721-27774869,27776053-27776538,27776743-27776886,
27776961-27777509,27778332-27778526,27779226-27779310,
27779570-27779670,27779689-27780360,27781101-27781433,
27781957-27782038,27782258-27782334,27782713-27782817,
27783810-27783944,27784437-27785159,27785882-27786663,
27787480-27789187
Length = 2891
Score = 27.5 bits (58), Expect = 9.5
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 6/80 (7%)
Frame = +3
Query: 201 PTAPSASGNCSPSAALLAQAHHRYRRHPLHLVRRQ----TLAQRLLHLRAVQDLARRQG- 365
PT P+ SPS + L + R P+H++R T L V + G
Sbjct: 2641 PTTPTTPR--SPSVSNLTEIRRRRIEGPMHVLRGHLEEVTSCSVSPDLGLVVSSSNMSGV 2698
Query: 366 -LHHRRTGHHLSRVRQAEAH 422
LH RTG + ++ AEAH
Sbjct: 2699 LLHSLRTGRLIRKLNVAEAH 2718
>02_05_0908 +
32668706-32669140,32669772-32669957,32670316-32670414,
32671010-32671147,32672276-32672533,32675009-32675272,
32675426-32675571,32675762-32675839,32676746-32676875,
32677040-32677286,32677374-32677423,32677767-32677869,
32678332-32678354
Length = 718
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 294 VRRQTLAQRLLHLRAVQDLARRQGLHHRRTGHHLSRVRQAEAHVNTPVSLQR 449
+RR+ + Q + H R +DL RR R T V + E N P +QR
Sbjct: 515 LRRRDVEQWMSHRRLPEDLRRRVRRAERFTWAATQGVNEEELLSNLPEDIQR 566
>01_01_0987 + 7803281-7803910,7803989-7804510
Length = 383
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 189 ATRSPTAPSASGNCSPSAALLAQAHHRYRRH 281
A R TA +A+G+ +P + L AH RH
Sbjct: 171 ARREDTAAAATGSTTPGMSRLRHAHSTLERH 201
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,295,223
Number of Sequences: 37544
Number of extensions: 304143
Number of successful extensions: 1120
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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