Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30276
(639 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 5e-23
SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22) 104 5e-23
SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39) 91 9e-19
SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32) 72 3e-13
SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34) 72 3e-13
SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 5e-13
SB_13716| Best HMM Match : LIM (HMM E-Value=0) 72 5e-13
SB_20996| Best HMM Match : LIM (HMM E-Value=9e-22) 55 4e-08
SB_15482| Best HMM Match : LIM (HMM E-Value=0) 54 1e-07
SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15) 48 9e-06
SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42) 46 2e-05
SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_31712| Best HMM Match : LIM (HMM E-Value=9e-26) 43 2e-04
SB_59654| Best HMM Match : LIM (HMM E-Value=0.0026) 38 0.009
SB_57743| Best HMM Match : LIM (HMM E-Value=1.7e-08) 36 0.028
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.049
SB_48895| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.085
SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14) 33 0.15
SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) 33 0.15
SB_43145| Best HMM Match : PEGSRP (HMM E-Value=7.2) 33 0.20
SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40) 33 0.26
SB_29553| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.34
SB_49644| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.60
SB_21950| Best HMM Match : PTN_MK_N (HMM E-Value=4.8) 31 0.60
SB_43770| Best HMM Match : PET (HMM E-Value=8.8e-24) 31 0.79
SB_13707| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.79
SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_35352| Best HMM Match : zf-C2H2 (HMM E-Value=0.0016) 31 1.0
SB_12157| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_24336| Best HMM Match : PqiA (HMM E-Value=1.5) 31 1.0
SB_22532| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_47303| Best HMM Match : CPSF_A (HMM E-Value=0) 30 1.8
SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35) 30 1.8
SB_35197| Best HMM Match : SAP (HMM E-Value=3.2) 29 2.4
SB_18414| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_39822| Best HMM Match : TPR_div1 (HMM E-Value=8.9) 29 4.2
SB_24401| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_10554| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 4.2
SB_8534| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_40925| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_30315| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0) 28 5.6
SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43) 28 5.6
SB_17888| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_10652| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_50164| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_42799| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_6822| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_32721| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 104 bits (250), Expect = 5e-23
Identities = 37/84 (44%), Positives = 54/84 (64%)
Frame = +2
Query: 2 FIPREQEIYCAGCYEDKFATRCVKCNKIITQGGVTYKNEPWHRECFTCTNCNTSLAGQRF 181
F+P++ +C GCY+ KF+ RC C + + +GGV Y E WH+ CF+C C+ SLA F
Sbjct: 442 FVPKDDTFFCPGCYQSKFSKRCASCGEPLLEGGVLYNGETWHKACFSCYFCHRSLASAAF 501
Query: 182 TSRDEKPYCAECFGELFAKRCTSC 253
+ RD YC EC+G+ +AK+C C
Sbjct: 502 SVRDGCRYCMECYGKFYAKQCEIC 525
Score = 69.7 bits (163), Expect = 2e-12
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +2
Query: 20 EIYCAGCYEDKFATRCVKCNKIITQGG--VTYKNEPWHRECFTCTNCNTSLAGQRFTSRD 193
+I C CY + C C ++I G + Y WH CF C NC ++ F +D
Sbjct: 387 QILCNNCYVANYQKECFACGQMIDSGASRLEYSGNFWHENCFRCANCGEAIGTSGFVPKD 446
Query: 194 EKPYCAECFGELFAKRCTSC 253
+ +C C+ F+KRC SC
Sbjct: 447 DTFFCPGCYQSKFSKRCASC 466
Score = 58.4 bits (135), Expect = 5e-09
Identities = 26/76 (34%), Positives = 37/76 (48%)
Frame = +2
Query: 26 YCAGCYEDKFATRCVKCNKIITQGGVTYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPY 205
Y AG A C+K I T N+ WH F C C+ S+ G++F R +KP
Sbjct: 267 YSAGAKPFYSAGPCLKALLIFTGEYTVAMNKNWHLGHFQCQTCDHSITGRQFIVRGDKPV 326
Query: 206 CAECFGELFAKRCTSC 253
C +CF + +A C +C
Sbjct: 327 CTDCFKDSYAHECEAC 342
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 26 YCAGCYEDKFATRCVKCNKIITQGGV-TYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKP 202
YC CY +A +C C K I G T + +H+ECF C+ C SLA + F ++
Sbjct: 509 YCMECYGKFYAKQCEICLKAIVGGEYYTLEESNFHKECFMCSRCGRSLASEGFVREGDEL 568
Query: 203 YCAEC 217
C +C
Sbjct: 569 LCGDC 573
Score = 52.0 bits (119), Expect = 4e-07
Identities = 16/49 (32%), Positives = 33/49 (67%)
Frame = +1
Query: 262 ITGIGGTRFISFEDRHWHNDCFICAQCKTSLVGKGFITDGQDIICPECA 408
+ I G + + E+ ++H +CF+C++C SL +GF+ +G +++C +CA
Sbjct: 526 LKAIVGGEYYTLEESNFHKECFMCSRCGRSLASEGFVREGDELLCGDCA 574
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Frame = +2
Query: 2 FIPREQEIYCAGCYEDKFATRCVKCNKIITQGGVTYKNEP---WHRECFTCTNCNTSLAG 172
FI R + C C++D +A C C++ I ++ WH +CF C C L
Sbjct: 318 FIVRGDKPVCTDCFKDSYAHECEACHQKIGPESRDISSDDDRHWHDKCFICDICRRPLKS 377
Query: 173 Q-RFTSRDEKPYCAECFGELFAKRCTSC 253
+FT ++ C C+ + K C +C
Sbjct: 378 DGKFTFYRDQILCNNCYVANYQKECFAC 405
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 292 SFEDRHWHNDCFICAQCKTSLVGKGFITDGQD-IICPEC 405
S +DRHWH+ CFIC C+ L G T +D I+C C
Sbjct: 355 SDDDRHWHDKCFICDICRRPLKSDGKFTFYRDQILCNNC 393
Score = 41.1 bits (92), Expect = 7e-04
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +1
Query: 277 GTRFISFEDRHWHNDCFICAQCKTSLVGKGFITDGQDIICPECAKQK 417
G + + WH +CF CA C ++ GF+ CP C + K
Sbjct: 412 GASRLEYSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSK 458
Score = 35.9 bits (79), Expect = 0.028
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 301 DRHWHNDCFICAQCKTSLVGKGFITDGQDIICPECAK 411
+++WH F C C S+ G+ FI G +C +C K
Sbjct: 296 NKNWHLGHFQCQTCDHSITGRQFIVRGDKPVCTDCFK 332
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1
Query: 289 ISFEDRHWHNDCFICAQCKTSLVGKGFITDGQDIICPEC 405
+ + WH CF C C SL F C EC
Sbjct: 475 VLYNGETWHKACFSCYFCHRSLASAAFSVRDGCRYCMEC 513
>SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22)
Length = 163
Score = 104 bits (250), Expect = 5e-23
Identities = 37/84 (44%), Positives = 54/84 (64%)
Frame = +2
Query: 2 FIPREQEIYCAGCYEDKFATRCVKCNKIITQGGVTYKNEPWHRECFTCTNCNTSLAGQRF 181
F+P++ +C GCY+ KF+ RC C + + +GGV Y E WH+ CF+C C+ SLA F
Sbjct: 30 FVPKDDTFFCPGCYQSKFSKRCASCGEPLLEGGVLYNGETWHKACFSCYFCHRSLASAAF 89
Query: 182 TSRDEKPYCAECFGELFAKRCTSC 253
+ RD YC EC+G+ +AK+C C
Sbjct: 90 SVRDGCRYCMECYGKFYAKQCEIC 113
Score = 54.0 bits (124), Expect = 1e-07
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +2
Query: 107 YKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELFAKRCTSC 253
Y WH CF C NC ++ F +D+ +C C+ F+KRC SC
Sbjct: 6 YSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKFSKRCASC 54
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 26 YCAGCYEDKFATRCVKCNKIITQGGV-TYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKP 202
YC CY +A +C C K I G T + +H+ECF C+ C SLA + F ++
Sbjct: 97 YCMECYGKFYAKQCEICLKAIVGGEYYTLEESNFHKECFMCSRCGRSLASEGFVREGDEL 156
Query: 203 YCAEC 217
C +C
Sbjct: 157 LCGDC 161
Score = 52.0 bits (119), Expect = 4e-07
Identities = 16/49 (32%), Positives = 33/49 (67%)
Frame = +1
Query: 262 ITGIGGTRFISFEDRHWHNDCFICAQCKTSLVGKGFITDGQDIICPECA 408
+ I G + + E+ ++H +CF+C++C SL +GF+ +G +++C +CA
Sbjct: 114 LKAIVGGEYYTLEESNFHKECFMCSRCGRSLASEGFVREGDELLCGDCA 162
Score = 40.3 bits (90), Expect = 0.001
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 289 ISFEDRHWHNDCFICAQCKTSLVGKGFITDGQDIICPECAKQK 417
+ + WH +CF CA C ++ GF+ CP C + K
Sbjct: 4 LEYSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSK 46
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1
Query: 289 ISFEDRHWHNDCFICAQCKTSLVGKGFITDGQDIICPEC 405
+ + WH CF C C SL F C EC
Sbjct: 63 VLYNGETWHKACFSCYFCHRSLASAAFSVRDGCRYCMEC 101
>SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39)
Length = 351
Score = 90.6 bits (215), Expect = 9e-19
Identities = 35/84 (41%), Positives = 51/84 (60%)
Frame = +2
Query: 2 FIPREQEIYCAGCYEDKFATRCVKCNKIITQGGVTYKNEPWHRECFTCTNCNTSLAGQRF 181
FI R++ C C++ KFA CVKCN++I V + +H ECFTC +C+ LAG F
Sbjct: 216 FIRRDERRLCNNCFDSKFAKVCVKCNQVIKTSSVQHAGSTYHSECFTCHHCDKPLAGSPF 275
Query: 182 TSRDEKPYCAECFGELFAKRCTSC 253
T ++ + C C+ E +AKRC +C
Sbjct: 276 TKQEGRNVCQNCYRERYAKRCGAC 299
Score = 68.1 bits (159), Expect = 6e-12
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +2
Query: 2 FIPREQEIYCAGCYEDKFATRCVKCNKIITQGG--VTYKNEPWHRECFTCTNCNTSLAGQ 175
F +E C CY +++A RC C+ +I V Y + +HRECFTC CN LAG+
Sbjct: 275 FTKQEGRNVCQNCYRERYAKRCGACHNLIEGNTKFVAYDEKYFHRECFTCCKCNKPLAGE 334
Query: 176 RFTSRDEKPYCAEC 217
+F RD + C C
Sbjct: 335 KFRIRDGEKICLPC 348
Score = 62.9 bits (146), Expect = 2e-10
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 FIPREQEIYCAGCYEDKFATRCVKCNKIITQGG--VTYKNEPWHRECFTCTNCNTSLAGQ 175
F +++++ C GC + C CN G V Y+++ +H +CF C C + +
Sbjct: 155 FTLKDEKLICHGCRGINPSKVCAACNGDFAPGEKKVGYQSKTFHDKCFICDECKQPIGSK 214
Query: 176 RFTSRDEKPYCAECFGELFAKRCTSC 253
+F RDE+ C CF FAK C C
Sbjct: 215 QFIRRDERRLCNNCFDSKFAKVCVKC 240
Score = 46.4 bits (105), Expect = 2e-05
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +1
Query: 274 GGTRFISFEDRHWHNDCFICAQCKTSLVGKGF-ITDGQDIICP 399
G T+F++++++++H +CF C +C L G+ F I DG+ I P
Sbjct: 305 GNTKFVAYDEKYFHRECFTCCKCNKPLAGEKFRIRDGEKICLP 347
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Frame = +2
Query: 65 CVKCNKIITQGGVTYKNEP------WHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGE 226
C +CN + G + E WH +CFTC L + S+D++ YC +GE
Sbjct: 80 CKRCNGPVNPGDMALFAERLGPDSCWHVKCFTCEEDGELLVDLIYCSKDDEIYCCRHWGE 139
Query: 227 LFAKRCTSC 253
RC C
Sbjct: 140 KLKPRCAGC 148
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 277 GTRFISFEDRHWHNDCFICAQCKTSLVGKGFITDGQDIICPECAKQK 417
G + + ++ + +H+ CFIC +CK + K FI + +C C K
Sbjct: 186 GEKKVGYQSKTFHDKCFICDECKQPIGSKQFIRRDERRLCNNCFDSK 232
Score = 31.1 bits (67), Expect = 0.79
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +1
Query: 310 WHNDCFICAQCKTSLVGKGFITDGQDIICPECAKQK 417
+H++CF C C L G F +C C +++
Sbjct: 256 YHSECFTCHHCDKPLAGSPFTKQEGRNVCQNCYRER 291
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 8/81 (9%)
Frame = +2
Query: 2 FIPREQEIYCAGCYEDKFATRCVKCNKIITQGGVTYKNEP--WH-----RECFTCTNCNT 160
+ ++ EIYC + +K RC C ++ G T K+E H C CN
Sbjct: 124 YCSKDDEIYCCRHWGEKLKPRCAGCEEM--NEGFTLKDEKLICHGCRGINPSKVCAACNG 181
Query: 161 SLA-GQRFTSRDEKPYCAECF 220
A G++ K + +CF
Sbjct: 182 DFAPGEKKVGYQSKTFHDKCF 202
>SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32)
Length = 648
Score = 72.1 bits (169), Expect = 3e-13
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 11 REQEIYCAGCYEDKFATRCVKCNKIITQGGVTYKNEP-WHRECFTCTNCNTSLAGQRFTS 187
++ ++YC + + RC C++II T + WH + F C C+ L G R+
Sbjct: 125 KDSKVYCGRHHAETLKPRCAACDEIIFAEQCTEAEDSCWHVQHFCCFECDCPLGGMRYVM 184
Query: 188 RDEKPYCAECFGELFAKRCTSC 253
RD KPYC CF L+A+ C SC
Sbjct: 185 RDNKPYCCHCFESLYAEFCDSC 206
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = +2
Query: 2 FIPREQEIYCAGCYEDKFATRCVKCNKIITQGG--VTYKNEPWH--RECFTCTNCNTSLA 169
++ R+ + YC C+E +A C C + I + + + WH ECF+C C +L
Sbjct: 182 YVMRDNKPYCCHCFESLYAEFCDSCGEPIEPDASQMAHNGQHWHATNECFSCCTCGKALL 241
Query: 170 GQRFTSRDEKPYCA 211
G F + + YC+
Sbjct: 242 GLPFLPKSGEIYCS 255
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 6/69 (8%)
Frame = +2
Query: 65 CVKCNKIITQGGVTY------KNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGE 226
C +C + +T G + ++ WH CF CT C L + +D K YC E
Sbjct: 78 CKECGECVTAGSMAVYASRAGQHTCWHASCFICTTCKELLVDLIYFYKDSKVYCGRHHAE 137
Query: 227 LFAKRCTSC 253
RC +C
Sbjct: 138 TLKPRCAAC 146
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +1
Query: 304 RHWH--NDCFICAQCKTSLVGKGFITDGQDIIC-PECA 408
+HWH N+CF C C +L+G F+ +I C P+C+
Sbjct: 222 QHWHATNECFSCCTCGKALLGLPFLPKSGEIYCSPDCS 259
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +1
Query: 310 WHNDCFICAQCKTSLVGKGFITDGQDIIC 396
WH CFIC CK LV + + C
Sbjct: 103 WHASCFICTTCKELLVDLIYFYKDSKVYC 131
>SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34)
Length = 621
Score = 72.1 bits (169), Expect = 3e-13
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +2
Query: 23 IYCAGCYEDKFATRCVKCNKIITQGGVTY-KNEPWHRECFTCTNCNTSLAGQRFTSRDEK 199
IYC Y ++F RC C+++I T ++ WH+ F C C+ L GQ + +R +
Sbjct: 360 IYCGRHYAEQFKPRCAACDELIFSETYTQAEDRNWHQRHFCCLECDRDLGGQLYVARGGQ 419
Query: 200 PYCAECFGELFAKRCTSC 253
P+C EC+ + +AK C SC
Sbjct: 420 PHCLECYDKYYAKHCMSC 437
Score = 47.6 bits (108), Expect = 9e-06
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Frame = +2
Query: 65 CVKCNKIITQGGVTY------KNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGE 226
C +C+K + G V +++ WH CF CT CN L + +D YC + E
Sbjct: 309 CFRCSKPVMTGEVAVFASRAGEDKCWHPGCFVCTVCNNLLVDLIYFYKDGVIYCGRHYAE 368
Query: 227 LFAKRCTSC 253
F RC +C
Sbjct: 369 QFKPRCAAC 377
Score = 35.9 bits (79), Expect = 0.028
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 298 EDRHWHNDCFICAQCKTSLVGKGFITDGQDIICPEC 405
EDR+WH F C +C L G+ ++ G C EC
Sbjct: 390 EDRNWHQRHFCCLECDRDLGGQLYVARGGQPHCLEC 425
Score = 30.7 bits (66), Expect = 1.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 298 EDRHWHNDCFICAQCKTSLV 357
ED+ WH CF+C C LV
Sbjct: 330 EDKCWHPGCFVCTVCNNLLV 349
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +2
Query: 2 FIPREQEIYCAGCYEDKFATRCVKCNKIITQGGVTYKNEPWHRECFTCTNCNTSLAGQ 175
++ R + +C CY+ +A C+ C K I ++++ F T TSL G+
Sbjct: 413 YVARGGQPHCLECYDKYYAKHCMSCKKNIAADAQRFEHQV---AKFLITQYRTSLIGR 467
>SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 71.7 bits (168), Expect = 5e-13
Identities = 29/63 (46%), Positives = 38/63 (60%)
Frame = +2
Query: 65 CVKCNKIITQGGVTYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELFAKRC 244
C C K IT V Y+N+P H ECF C +C T LAG+ F RD++ C +C +AKRC
Sbjct: 2 CNSCFKTITSSVVRYQNKPHHSECFVCFHCRTPLAGKTFQMRDDRKVCKDCNRIHYAKRC 61
Query: 245 TSC 253
+C
Sbjct: 62 VAC 64
Score = 66.1 bits (154), Expect = 2e-11
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 FIPREQEIYCAGCYEDKFATRCVKCNKII--TQGGVTYKNEPWHRECFTCTNCNTSLAGQ 175
F R+ C C +A RCV C + I T VT +H +CF C+ C LAG+
Sbjct: 40 FQMRDDRKVCKDCNRIHYAKRCVACRQYIEGTVKFVTRDEGTYHSDCFVCSRCRKPLAGK 99
Query: 176 RFTSRDEKPYCAECFGELFAKRCTSC 253
FT + C +C+ + +AKRC C
Sbjct: 100 TFTEHEGSWVCDDCYHDRYAKRCNMC 125
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Frame = +2
Query: 2 FIPREQEIYCAGCYEDKFATRCVKCNKIITQG--GVTYKNEPWHRECFTCTN--CNTSLA 169
F E C CY D++A RC C++ + V Y + +H ECF C N C L+
Sbjct: 101 FTEHEGSWVCDDCYHDRYAKRCNMCHQSLEANVEFVKYDEKLYHNECFVCQNPRCRKPLS 160
Query: 170 GQRFTSR-DEKPYCAEC 217
G +F + D + C C
Sbjct: 161 GAKFALKSDGRRMCLNC 177
Score = 44.0 bits (99), Expect = 1e-04
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +1
Query: 274 GGTRFISFEDRHWHNDCFICAQCKTSLVGKGFITDGQDIICPEC 405
G +F++ ++ +H+DCF+C++C+ L GK F +C +C
Sbjct: 70 GTVKFVTRDEGTYHSDCFVCSRCRKPLAGKTFTEHEGSWVCDDC 113
Score = 38.7 bits (86), Expect = 0.004
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 289 ISFEDRHWHNDCFICAQCKTSLVGKGFITDGQDIICPEC 405
+ ++++ H++CF+C C+T L GK F +C +C
Sbjct: 14 VRYQNKPHHSECFVCFHCRTPLAGKTFQMRDDRKVCKDC 52
Score = 32.3 bits (70), Expect = 0.34
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Frame = +1
Query: 286 FISFEDRHWHNDCFIC--AQCKTSLVGKGFI--TDGQDIICPEC 405
F+ ++++ +HN+CF+C +C+ L G F +DG+ +C C
Sbjct: 135 FVKYDEKLYHNECFVCQNPRCRKPLSGAKFALKSDGRR-MCLNC 177
Score = 30.7 bits (66), Expect = 1.0
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Frame = +2
Query: 2 FIPREQEIYCAGCYEDKFATRCVK--CNKIITQG-GVTYKNEPWH-RECFTCTNCNTSL- 166
F+ R++ Y + C+ +RC K K T+ G ++ +H R C C+ SL
Sbjct: 74 FVTRDEGTYHSDCF---VCSRCRKPLAGKTFTEHEGSWVCDDCYHDRYAKRCNMCHQSLE 130
Query: 167 AGQRFTSRDEKPYCAECF 220
A F DEK Y ECF
Sbjct: 131 ANVEFVKYDEKLYHNECF 148
>SB_13716| Best HMM Match : LIM (HMM E-Value=0)
Length = 401
Score = 71.7 bits (168), Expect = 5e-13
Identities = 32/81 (39%), Positives = 39/81 (48%)
Frame = +2
Query: 2 FIPREQEIYCAGCYEDKFATRCVKCNKIITQGGVTYKNEPWHRECFTCTNCNTSLAGQRF 181
F R+ + YC Y D FA RC CN I VT ++ WH E F C C F
Sbjct: 320 FFERDGKPYCERDYHDTFAPRCAYCNGPILDSCVTALDQTWHPEHFVCAECGNPFGDTGF 379
Query: 182 TSRDEKPYCAECFGELFAKRC 244
RD KP+C E + +FA RC
Sbjct: 380 HERDGKPFCREDYYAMFAPRC 400
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/63 (41%), Positives = 29/63 (46%)
Frame = +2
Query: 65 CVKCNKIITQGGVTYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELFAKRC 244
C CNK I T + WH E F C C L Q F RD KPYC + + FA RC
Sbjct: 282 CAACNKPIIGQVCTALGKTWHPEHFACVACEAPLGTQNFFERDGKPYCERDYHDTFAPRC 341
Query: 245 TSC 253
C
Sbjct: 342 AYC 344
Score = 27.5 bits (58), Expect = 9.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 301 DRHWHNDCFICAQCKTSLVGKGF 369
D+ WH + F+CA+C GF
Sbjct: 357 DQTWHPEHFVCAECGNPFGDTGF 379
>SB_20996| Best HMM Match : LIM (HMM E-Value=9e-22)
Length = 81
Score = 55.2 bits (127), Expect = 4e-08
Identities = 27/77 (35%), Positives = 35/77 (45%)
Frame = +2
Query: 2 FIPREQEIYCAGCYEDKFATRCVKCNKIITQGGVTYKNEPWHRECFTCTNCNTSLAGQRF 181
F + YC Y K T C C K IT +T + +H E F C C L F
Sbjct: 4 FFDHDGRPYCEMHYHAKRGTLCYSCQKPITGRCITAMHRKFHPEHFVCAFCLKQLNKGTF 63
Query: 182 TSRDEKPYCAECFGELF 232
+++KPYC CF +LF
Sbjct: 64 KEQNDKPYCHPCFVKLF 80
>SB_15482| Best HMM Match : LIM (HMM E-Value=0)
Length = 349
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +2
Query: 11 REQEIYCAGCYEDKFATRCVKCNKIITQGGVTYK--NEPWHRECFTCTNCNTSL-AGQRF 181
+++++YC YE F T+C C K I + + +H CF CT C L GQ F
Sbjct: 87 KDRKLYCRTDYEKVFGTKCSGCKKTIPANELVMRALGNVYHLHCFVCTMCGHILEKGQEF 146
Query: 182 TSRDEKPYCAECFGEL 229
+D K YC F +L
Sbjct: 147 ALKDNKLYCKADFAKL 162
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 CYEDKFATRCVKCNKIITQGGVT-YKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAE 214
C ++ C CN+ I + +E WH C C C + L+ F S+D K YC
Sbjct: 37 CGQNGRVNICTGCNEPIEDRFLMKVVDEAWHESCLQCCICRSQLSRSCF-SKDRKLYCRT 95
Query: 215 CFGELFAKRCTSC 253
+ ++F +C+ C
Sbjct: 96 DYEKVFGTKCSGC 108
>SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15)
Length = 85
Score = 47.6 bits (108), Expect = 9e-06
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 62 RCVKCNKIITQGGVTYK-NEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELFAK 238
+C +C+K + + + WH+ C TC CN SL +D + YC C+G+ F
Sbjct: 9 KCPRCSKTVYKAEERLAIGKKWHKSCLTCKCCNKSLDSTNLADKDGEIYCKGCYGKNFGP 68
Query: 239 R 241
+
Sbjct: 69 K 69
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/34 (29%), Positives = 12/34 (35%)
Frame = +1
Query: 304 RHWHNDCFICAQCKTSLVGKGFITDGQDIICPEC 405
+ WH C C C SL +I C C
Sbjct: 28 KKWHKSCLTCKCCNKSLDSTNLADKDGEIYCKGC 61
>SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 65 CVKCNKIITQGGVTYKNEP-WHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELFAKR 241
C C + I E WH CF+CT C+ L+ + + D KPYC + + ELF
Sbjct: 89 CAGCGEAIKGSQALLALEKQWHLWCFSCTKCHCLLSLE-YMGMDGKPYCEKDYQELFGVT 147
Query: 242 CTSC 253
C +C
Sbjct: 148 CAAC 151
Score = 35.1 bits (77), Expect = 0.049
Identities = 10/46 (21%), Positives = 23/46 (50%)
Frame = +2
Query: 17 QEIYCAGCYEDKFATRCVKCNKIITQGGVTYKNEPWHRECFTCTNC 154
++ YC Y++++ +C C + ++ + +H CF C +C
Sbjct: 3 EQYYCKDDYQNQYGKKCDSCQLYLEGEIISIHGKNFHEACFACNSC 48
>SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42)
Length = 328
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +2
Query: 11 REQEIYCAGCYEDKFATRCVKCNKIITQGGVT--YKNEPWHRECFTCTNCNTSLA-GQRF 181
++ +IYC Y +F T+C +C + I KN +H CF C NC L+ G+ F
Sbjct: 145 KDGKIYCKADYARQFGTKCARCGRSIHANDWVRRAKNCVYHLACFACDNCKRQLSTGEEF 204
Query: 182 TSRDEKPYC 208
+D C
Sbjct: 205 ALKDGHVLC 213
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +2
Query: 62 RCVKCN-KIITQGGVTYKNEPWHRECFTCTNCNTSLAGQRFT--SRDEKPYCAECFGELF 232
RCV C KI+ + V WH +C C C+ L G+ T ++D K YC + F
Sbjct: 101 RCVGCEAKIVDRYLVKVSGRAWHTKCLKCCLCSDEL-GREATCYTKDGKIYCKADYARQF 159
Query: 233 AKRCTSC 253
+C C
Sbjct: 160 GTKCARC 166
>SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/84 (26%), Positives = 31/84 (36%)
Frame = +2
Query: 2 FIPREQEIYCAGCYEDKFATRCVKCNKIITQGGVTYKNEPWHRECFTCTNCNTSLAGQRF 181
+IP + I G + C C + + V + WH E F C C G R+
Sbjct: 60 YIPEGEHIMYMGDPVHPWHYNCFCCGRPVEDRVVHALGKAWHVEHFVCAKCEKPFYGHRY 119
Query: 182 TSRDEKPYCAECFGELFAKRCTSC 253
R YC + EL+ C C
Sbjct: 120 YERKGLAYCETHYNELYGDICFEC 143
Score = 34.3 bits (75), Expect = 0.085
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +1
Query: 283 RFISFEDRHWHNDCFICAQCKTSLVGKGFITDGQDIICPE 402
R I +WH DCF C C L GF+ + PE
Sbjct: 24 RVIKAMQANWHPDCFRCEICNDCLADTGFVKNAGSTYIPE 63
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +2
Query: 122 WHRECFTCTNCNTSLAGQRFTSRDEKPYCAE 214
WH +CF C CN LA F Y E
Sbjct: 33 WHPDCFRCEICNDCLADTGFVKNAGSTYIPE 63
>SB_31712| Best HMM Match : LIM (HMM E-Value=9e-26)
Length = 481
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +2
Query: 53 FATRCVKCNKIITQGGVTYK--NEPWHRECFTCTNCNTSL-AGQRFTSRDEKPYCAECFG 223
F T+C C K I + + +H CF CT C L GQ F +D K YC F
Sbjct: 3 FGTKCSGCKKTIPANELVMRALGNVYHLHCFVCTMCGHILEKGQEFALKDNKLYCKADFA 62
Query: 224 EL 229
+L
Sbjct: 63 KL 64
>SB_59654| Best HMM Match : LIM (HMM E-Value=0.0026)
Length = 56
Score = 37.5 bits (83), Expect = 0.009
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 62 RCVKCNKIITQG-GVTYKNEPWHRECFTCTNCNTSL 166
+C KC+K + G +H+ CFTCT CN SL
Sbjct: 11 KCPKCDKTVYSAEGQALLGMTFHKRCFTCTTCNKSL 46
>SB_57743| Best HMM Match : LIM (HMM E-Value=1.7e-08)
Length = 197
Score = 35.9 bits (79), Expect = 0.028
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 62 RCVKCNKIITQGGVTYKN-EPWHRECFTCTNCNTSLAGQRFTSRD 193
+C +C K + N + WH+ C TC +CN L T++D
Sbjct: 4 KCPRCEKPVYFAEQAKANGKSWHKPCLTCKHCNKRLDSTNLTNKD 48
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 35.1 bits (77), Expect = 0.049
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +2
Query: 59 TRCVKCN-KIITQGGVTYKNEPWHRECFTCTNCNTSLAGQRFTSRDE-KPYCA--ECFG 223
T C+ C ++ + + +HR CF C+ CN+SL +T E + +C EC G
Sbjct: 609 TACLICGERVYLMERLVAERRLFHRACFRCSRCNSSLRAGTYTFFPESESFCCLYECMG 667
>SB_48895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 829
Score = 34.3 bits (75), Expect = 0.085
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +2
Query: 65 CVKCNKIITQGGVTYK--NEPWHRECFTCTNCNTSLA-GQRFTSRDEKPYC 208
C C K+I + K + +H CFTCT C+ L G RF + + +C
Sbjct: 708 CAVCAKLIPATELVMKVLGKVYHLHCFTCTTCHNQLVPGDRFHVVNGRLFC 758
>SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14)
Length = 446
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 38 CYEDKFATRCVKC-NKIITQGGVTYKNEPWHRECFTCTNCNTSLAGQRFTSRDEK 199
C D +C +C + + V+ +N +H++CF+C +C L S D K
Sbjct: 36 CVADNMP-KCPRCGDNVYHAEEVSMENHKFHKKCFSCKDCRKKLDSTNAASHDGK 89
Score = 31.1 bits (67), Expect = 0.79
Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +2
Query: 62 RCVKCNKIITQG-GVTYKNEPWHRECFTC 145
RC +C+K+ G++ + WH+ CF C
Sbjct: 296 RCGRCDKMCYHAEGISMAGKRWHKSCFAC 324
>SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07)
Length = 2128
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Frame = +2
Query: 14 EQEIYCAGCYEDKFATRCVKCNKIITQGGVTYKNEP---WHRECFTCTNCNT--SLAGQR 178
+ IY + D+ T C C++ I + Y +E WH +CF+C C+ A QR
Sbjct: 2015 DYSIYETFVHGDRNVT-CASCSQPIRKSMAVYVSELKRYWHDDCFSCVVCHVRFGTAEQR 2073
Query: 179 FTSR--DEKPYCAECF 220
+ D +C CF
Sbjct: 2074 SPLKITDSLLHCENCF 2089
Score = 30.3 bits (65), Expect = 1.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 286 FISFEDRHWHNDCFICAQC 342
++S R+WH+DCF C C
Sbjct: 2045 YVSELKRYWHDDCFSCVVC 2063
>SB_43145| Best HMM Match : PEGSRP (HMM E-Value=7.2)
Length = 165
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +2
Query: 41 YEDKFATRCVKCNKIITQGGVTYKNEPW--HRECFTCTNCNTSLA-GQRFTSRDEKPYCA 211
+ + +TRC+ ++ TQ +++ PW T + T++A G R R YC
Sbjct: 7 HASRVSTRCLSIGQLRTQPRFSFRKVPWLFLNRASTANSERTAIASGPRSNFRAAVAYCR 66
Query: 212 ECFGELFAKRC 244
FG+ C
Sbjct: 67 HAFGDPLESTC 77
>SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 33.1 bits (72), Expect = 0.20
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 122 WHRECFTCTNCNTSLAGQRFTSRDEKPYC 208
WH+ CF C +C +L + + + PYC
Sbjct: 213 WHKGCFKCESCGMTLNMKTYKGYQKLPYC 241
>SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40)
Length = 434
Score = 32.7 bits (71), Expect = 0.26
Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 11 REQEIYCAGCYEDKFATRCVKCNKIITQGGVT--YKNEPWHRECFTCTNCNTSL 166
RE +++C + ++ T+C C++ I+ + K+ +H +CF C+ C +
Sbjct: 46 REGKLFCKTDFYRRYGTKCSGCDQGISPNDMVRRAKHLVFHVDCFVCSYCKRQI 99
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +1
Query: 301 DRHWHNDCFICAQCKTSLVGKGFITDGQ 384
D WH C C+ CK L + F +G+
Sbjct: 22 DGVWHAQCVQCSDCKCPLTERCFSREGK 49
>SB_29553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 573
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +2
Query: 56 ATRCVKCNKIIT-QGGVTYKNEPWHRECFTCTNCNTSL--AGQRFTSRDEKPYCAECFGE 226
+ RC C K + V +N +H+ CF C CN L F +K YC + + +
Sbjct: 242 SNRCDSCGKSVDILERVAVENHVFHKACFVCAICNVWLNHFNYCFVPDHDKFYCVQHYQD 301
Query: 227 L 229
+
Sbjct: 302 I 302
>SB_49644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1615
Score = 31.5 bits (68), Expect = 0.60
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = -2
Query: 527 CSLHITKHLSYINCIACEGWSDARAEALKRDRCIYMS--FCLAHSGQMMSCPSVMKPLPT 354
CS I + + ++ C CE W L +R + C +GQ+++ S PLP
Sbjct: 1489 CSRPIGEEVGWVQCDQCERWYHLVCIGLSSERAEALDSYHCKLCTGQVVNLTSTESPLPE 1548
Query: 353 S 351
S
Sbjct: 1549 S 1549
>SB_21950| Best HMM Match : PTN_MK_N (HMM E-Value=4.8)
Length = 406
Score = 31.5 bits (68), Expect = 0.60
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Frame = +2
Query: 62 RCVKCNKIITQGGVTYKNEPWHRECFTC--TNCNTSLAGQRFTSRDEKPYCAECFGELFA 235
RC C Q G KN + +C+ C C+ + R E+ YC EC+ L
Sbjct: 317 RCYYCTSC--QKGYDRKNHKCNNQCYGCGEQECSPLVPPALQDHRWERQYCDECYRYLRT 374
Query: 236 KRC 244
+ C
Sbjct: 375 QTC 377
>SB_43770| Best HMM Match : PET (HMM E-Value=8.8e-24)
Length = 251
Score = 31.1 bits (67), Expect = 0.79
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 6/54 (11%)
Frame = +2
Query: 65 CVKCNKIITQGGVTYKNEP------WHRECFTCTNCNTSLAGQRFTSRDEKPYC 208
C +CN + G + E WH +CFTC L + S+D + YC
Sbjct: 193 CKRCNGPVNPGDMALFAERLGPDSCWHVKCFTCEEDGELLVDLIYCSKDAEIYC 246
>SB_13707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 31.1 bits (67), Expect = 0.79
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -1
Query: 300 FERDEA--GAADTCDGLVQEVQRLANSSPKHSAQ*GFSSREVNRWPASDV 157
F +D+ GA TC +EV+RL S K S RE+ WP S V
Sbjct: 221 FRQDQKPKGAGQTCLSCPEEVERLCPYSAKKIYLDRLSPREIPHWPMSVV 270
>SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2680
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +2
Query: 122 WHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELFAKRCTSC 253
W+ + C+ CN +G T+ + YC +C + +RC C
Sbjct: 815 WNPSGYGCSPCNCDASGSLATNCNSTGYC-QCKPNIGGRRCDRC 857
>SB_35352| Best HMM Match : zf-C2H2 (HMM E-Value=0.0016)
Length = 221
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 62 RCVKCNKIITQGGVTYKNEPWHRECFTCTNCNTSLA 169
RC KC+KI + ++ H + + CT C+ + A
Sbjct: 184 RCNKCDKIFSSSSELVRHFHHHMDVYQCTKCDKTFA 219
>SB_12157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +1
Query: 298 EDRHWHNDCFICAQCKTSLVGKGFI---TDGQDIICPECAKQK 417
E W CA+CK+ G+G + T + +C +C K+K
Sbjct: 126 EGYFWDTGTLYCAECKSCGRGRGVVRNCTHNHNTVCRKCEKEK 168
>SB_24336| Best HMM Match : PqiA (HMM E-Value=1.5)
Length = 260
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/85 (27%), Positives = 42/85 (49%)
Frame = +3
Query: 189 ATRSPTAPSASGNCSPSAALLAQAHHRYRRHPLHLVRRQTLAQRLLHLRAVQDLARRQGL 368
++ S T+PSAS S S+A L H R+R H H + ++ + ++Q +RQ
Sbjct: 40 SSTSSTSPSASVY-SVSSASLQHLHQRHRHHQHHHQLQYSVYS--VSSASLQHHHQRQRH 96
Query: 369 HHRRTGHHLSRVRQAEAHVNTPVSL 443
H + H L ++ + H + +S+
Sbjct: 97 RHHQHHHQLQYIQCHQHHYSIIISV 121
>SB_22532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/65 (21%), Positives = 28/65 (43%)
Frame = +2
Query: 62 RCVKCNKIITQGGVTYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELFAKR 241
+C +C+K G ++ WH++ + C+ + + +EKP E +
Sbjct: 359 QCTQCSKSFNSGSSLARHFAWHKKA-SDVQCHENSTAALDSQVEEKPNAKPSKMEFSDHK 417
Query: 242 CTSCT 256
CT C+
Sbjct: 418 CTHCS 422
>SB_47303| Best HMM Match : CPSF_A (HMM E-Value=0)
Length = 1291
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +3
Query: 261 HHRYRRHPLH--LVRRQTLAQRLL-HLRAVQDLARRQGLHHRRTGHH 392
HH Y HP H L+R + RLL H + R H+R HH
Sbjct: 1000 HHHYHYHPFHYRLLRHHSFHYRLLRHHPFHYRVLRHHPFHYRVLRHH 1046
>SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35)
Length = 160
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 310 WHNDCFICAQCKTSL-VGKGFITDGQDIIC-PECAKQ 414
+H +CF C +C+ L VG+ F ++C CAK+
Sbjct: 102 YHIECFGCQRCRKRLVVGEAFCFHDNKVLCLDRCAKE 138
>SB_35197| Best HMM Match : SAP (HMM E-Value=3.2)
Length = 323
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 198 SPTAPSASGNCSPSAALLAQAHHRYRRHPLH 290
S ++ SA+ S S++ + +HH Y RH LH
Sbjct: 187 SSSSSSAAAASSSSSSSSSSSHHHYHRHHLH 217
>SB_18414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = +2
Query: 14 EQEIYCAGCYEDKFATRCVKCNKIITQGGVTYKNEPWHRECFTCTNCNTSLAGQRFTSRD 193
++E+Y + + TR K +G K E + + ++ NC+ AGQ+ T R
Sbjct: 215 KKELYAEDRWSKRNCTRKTAGQKGTVRGRPLVKKELYEEDRWSKRNCSRKTAGQKGTVRG 274
Query: 194 EKPYCAECFGE 226
E F E
Sbjct: 275 RPLVKKELFAE 285
>SB_39822| Best HMM Match : TPR_div1 (HMM E-Value=8.9)
Length = 186
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/54 (24%), Positives = 29/54 (53%)
Frame = -2
Query: 395 QMMSCPSVMKPLPTSEVLHCAQMKQSLCQCLSSNEMKRVPPIPVMGLCKKCSAW 234
+++ PS ++ LP ++ L A K C+ + ++R+ P+M L ++ +W
Sbjct: 85 ELLETPSYIETLPENQALRKA--KDFYRSCMDTKTIERLGTRPLMKLIRQLGSW 136
>SB_24401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/54 (24%), Positives = 29/54 (53%)
Frame = -2
Query: 395 QMMSCPSVMKPLPTSEVLHCAQMKQSLCQCLSSNEMKRVPPIPVMGLCKKCSAW 234
+++ PS ++ LP ++ L A K C+ + ++R+ P+M L ++ +W
Sbjct: 88 ELLETPSYIETLPENQALRKA--KDFYRSCMDTKTIERLGTRPLMKLIRQLGSW 139
>SB_10554| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 194
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 9/69 (13%)
Frame = +2
Query: 62 RCVKCNKIITQGGVTYKNEPWHR--------ECFTCTNCNTSLAGQRFTSRDEKPY-CAE 214
RC +C K TQ G ++ H EC C N + +L +KPY C E
Sbjct: 76 RCDECGKGFTQSGALNRHLRIHSGQKPYKCDECGKCFNQSANLKTHLRIHSGQKPYKCDE 135
Query: 215 CFGELFAKR 241
C G+ F ++
Sbjct: 136 C-GKCFTRQ 143
>SB_8534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 926
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 9/62 (14%)
Frame = -1
Query: 582 CFLNAH-HSR--------ALANYR*YGMFAAHHKTFVIYKLYCV*GMERCESGSVEARQV 430
CFL H HS+ A+ R A+ + + Y + G+E+ ++GSV+AR+
Sbjct: 350 CFLRHHLHSKVTYSMLRCAIVTVRAASSAASQKSNLNVRECYMLLGLEKGKTGSVDAREA 409
Query: 429 YL 424
YL
Sbjct: 410 YL 411
>SB_40925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 30
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 110 KNEPWHRECFTCTNCNTSLAGQRFTSRD 193
+N +H++CF+C +C L S D
Sbjct: 2 ENHKFHKKCFSCKDCRKKLDSTNAASHD 29
>SB_30315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 75
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -1
Query: 393 DDVLSVGDEALADERGLALRADEAVVVPVSVFERDEAGAADTCDG--LVQEVQRLANSSP 220
+ V VGD++L +ER L +E V E +A D D L+QE++ AN P
Sbjct: 16 EQVNDVGDDSLQEERALPFDDEERSVPSSQRQEVPDARYLDDLDDELLLQEMEEEANPLP 75
>SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2681
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 638 CEKLNLPVNVVKSFRSRCP 582
CE+L P+ VV+ F S CP
Sbjct: 996 CERLGKPLEVVECFNSECP 1014
>SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43)
Length = 511
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +1
Query: 301 DRHWHNDCFICAQCKTSLVGK--GFITDGQDIICPE 402
D+ WH DC C+ C+ L + F DG I+C E
Sbjct: 265 DQEWHADCLKCSDCELRLDNELTCFSKDGV-ILCRE 299
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 301 DRHWHNDCFICAQCKTSL-VGKGFITDGQDIICPE 402
D+ +H +CF C +CK L G+ F G I C E
Sbjct: 328 DQVYHVNCFACDRCKRMLATGEYFGMRGIRIYCKE 362
>SB_17888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +2
Query: 41 YEDKFATRCVKCNKIITQGGVTYKNEPW--HRECFTCTNCNTSLA-GQRFTSRDEKPYCA 211
+ + +TRC+ ++ TQ +++ PW T + T++A G R R YC
Sbjct: 7 HASRVSTRCLSIGQLRTQPRFSFRKVPWLFLNRASTANSERTAIASGPRSNFRAAVAYCR 66
Query: 212 ECF 220
F
Sbjct: 67 HAF 69
>SB_10652| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +2
Query: 41 YEDKFATRCVKCNKIITQGGVTYKNEPW--HRECFTCTNCNTSLA-GQRFTSRDEKPYCA 211
+ + +TRC+ ++ TQ +++ PW T + T++A G R R YC
Sbjct: 7 HASRVSTRCLSIGQLRTQPRFSFRKVPWLFLNRASTANSERTAIASGPRSNFRAAVAYCR 66
Query: 212 ECF 220
F
Sbjct: 67 HAF 69
>SB_50164| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1780
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 8/67 (11%)
Frame = +2
Query: 41 YEDKFATRCVKCNKIITQGGVTYKNEPWHRE--CFTCTNCNTS------LAGQRFTSRDE 196
Y + +C +C KI K++ H + + C+ C+ L G T RD+
Sbjct: 491 YGSRPEIKCEQCGKIFGSSSALAKHKLTHSDERRYVCSICSKGFKRQDHLNGHMVTHRDK 550
Query: 197 KPYCAEC 217
KPY EC
Sbjct: 551 KPY--EC 555
>SB_42799| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 625 ICQ*MS*NLFARGVLLSERAPFSGVSELPV 536
IC+ + N + G LL+ERA G+SE P+
Sbjct: 7 ICEETAVNRYNMGALLAERAATEGISEDPL 36
>SB_6822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 322 CFICAQCKTSLVGKGFITDGQDIICPECAKQK 417
C +C QC T + +G++ CP CA K
Sbjct: 362 CDVCGQCGTHKICQGWVAMPDIWECPTCAAVK 393
>SB_32721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 637
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -2
Query: 518 HITKHLSYINCIACEGWSDARAE-ALKRDRC 429
H T H + I C+ G++ R + ALK+ RC
Sbjct: 371 HRTHHRTRIRCVCMPGYTGQRCQRALKKARC 401
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,778,227
Number of Sequences: 59808
Number of extensions: 364618
Number of successful extensions: 1234
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1212
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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