Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30276
         (639 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    25   1.5  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    25   1.5  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   2.0  
AJ973473-1|CAJ01520.1|  127|Anopheles gambiae hypothetical prote...    24   3.5  
AF437891-1|AAL84186.1|  127|Anopheles gambiae sensory appendage ...    24   3.5  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   4.7  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   6.2  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    23   6.2  
AJ973475-1|CAJ01522.1|  127|Anopheles gambiae hypothetical prote...    23   8.2  
AJ697728-1|CAG26921.1|  127|Anopheles gambiae putative sensory a...    23   8.2  

>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = -2

Query: 473 GWSDARAEALKRDRCIYMSFC---LAHSGQMMSCPSVMKPLPTSEV 345
           GW + +        CIY+ FC   L+H+  +++ P++  P    +V
Sbjct: 112 GWREVQQPPRLSRLCIYVVFCSALLSHNAFVLARPNLSAPASGEKV 157


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 363 GLHHRRTGHHLSRVRQAEAHVNTPVS 440
           GLHH   GHH +      AH+  P S
Sbjct: 347 GLHHHHPGHHAA----LHAHLGVPTS 368


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +3

Query: 288 HLVRRQTLAQRLLHLRAVQDLARRQGLHHRRTGHH 392
           HL+++Q   Q+  H +A Q   +    HH    HH
Sbjct: 636 HLLQQQQQQQQHQHHQAHQHQGQHHAQHHSNGTHH 670


>AJ973473-1|CAJ01520.1|  127|Anopheles gambiae hypothetical protein
           protein.
          Length = 127

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 296 NEMKRVPPIPVMGLCKKCS 240
           NE+KR+ P  +   C+KCS
Sbjct: 58  NELKRILPDALQTNCEKCS 76


>AF437891-1|AAL84186.1|  127|Anopheles gambiae sensory appendage
           protein protein.
          Length = 127

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 296 NEMKRVPPIPVMGLCKKCS 240
           NE+KR+ P  +   C+KCS
Sbjct: 58  NELKRILPDALQTNCEKCS 76


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 237 SAALLAQAHHRYRRHPLHLVRRQTLAQRLLHLRAVQDLA 353
           +AA+    HH +  HP      Q  +Q+  HL+ V  LA
Sbjct: 153 AAAMHHHHHHPHHHHPGLTGLMQAPSQQQQHLQPVHPLA 191


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +2

Query: 143 CTNCNTSLAGQRFTSRDEKPYCAEC 217
           CTNC T        + D +P C  C
Sbjct: 177 CTNCGTRTTTLWRRNNDGEPVCNAC 201


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -2

Query: 362 LPTSEVLHCAQMKQSLCQCLSSNEMKRVPPIPVMGLCKKC 243
           LPT      A  K  LC C+SS  M+ +P       C +C
Sbjct: 355 LPTKAAKQLAGRKLRLCGCISS-IMEAMPVSVDRQRCYRC 393


>AJ973475-1|CAJ01522.1|  127|Anopheles gambiae hypothetical protein
           protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 296 NEMKRVPPIPVMGLCKKCS 240
           NE+K++ P  +   C+KCS
Sbjct: 58  NELKKILPEALQTNCEKCS 76


>AJ697728-1|CAG26921.1|  127|Anopheles gambiae putative sensory
           appendage protein SAP-2 protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 296 NEMKRVPPIPVMGLCKKCS 240
           NE+K++ P  +   C+KCS
Sbjct: 58  NELKKILPEALQTNCEKCS 76


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,188
Number of Sequences: 2352
Number of extensions: 11826
Number of successful extensions: 49
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)